RNA–Protein interactions for RNA: ENST00000423701.6

SEC22C-207, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,458 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-207ENST00000423701 RTF1Q92541 710 aaKnown RBP28.64■■■□□ 2.17
SEC22C-207ENST00000423701 SIPA1L3O60292 1781 aaPredicted RBP28.64■■■□□ 2.17
SEC22C-207ENST00000423701 HTATSF1O43719 755 aaKnown RBP28.63■■■□□ 2.17
SEC22C-207ENST00000423701 ASAP1Q9ULH1 1129 aa28.63■■■□□ 2.17
SEC22C-207ENST00000423701 PAPPAQ13219 1627 aa28.62■■■□□ 2.17
SEC22C-207ENST00000423701 TMPOP42166 694 aaKnown RBP28.62■■■□□ 2.17
SEC22C-207ENST00000423701 MCM10Q7L590 875 aa28.62■■■□□ 2.17
SEC22C-207ENST00000423701 DCTN1Q14203 1278 aa28.61■■■□□ 2.17
SEC22C-207ENST00000423701 SMARCC1Q92922 1105 aaPredicted RBP28.61■■■□□ 2.17
SEC22C-207ENST00000423701 ATG3Q9NT62 314 aa28.61■■■□□ 2.17
SEC22C-207ENST00000423701 CCER2I3L3R5 266 aa28.6■■■□□ 2.17
SEC22C-207ENST00000423701 RRP7AQ9Y3A4 280 aaKnown RBP28.6■■■□□ 2.17
SEC22C-207ENST00000423701 RIPK4P57078 832 aa28.59■■■□□ 2.17
SEC22C-207ENST00000423701 TEFQ10587 303 aa28.59■■■□□ 2.17
SEC22C-207ENST00000423701 MIER1Q8N108 512 aa28.59■■■□□ 2.17
SEC22C-207ENST00000423701 LRRC4BQ9NT99 713 aa28.58■■■□□ 2.17
SEC22C-207ENST00000423701 NEUROD2Q15784 382 aa28.57■■■□□ 2.16
SEC22C-207ENST00000423701 SLC27A3Q5K4L6 730 aa28.57■■■□□ 2.16
SEC22C-207ENST00000423701 FAM9BQ8IZU0 186 aa28.57■■■□□ 2.16
SEC22C-207ENST00000423701 APAF1O14727 1248 aa28.56■■■□□ 2.16
SEC22C-207ENST00000423701 CCNL1Q9UK58 526 aaPredicted RBP28.56■■■□□ 2.16
SEC22C-207ENST00000423701 KCNQ4P56696 695 aa28.55■■■□□ 2.16
SEC22C-207ENST00000423701 THUMPD2Q9BTF0 503 aaKnown RBP28.54■■■□□ 2.16
SEC22C-207ENST00000423701 LMOD3Q0VAK6 560 aa28.53■■■□□ 2.16
SEC22C-207ENST00000423701 LOC102724428A0A0B4J2F2 783 aa28.53■■■□□ 2.16
SEC22C-207ENST00000423701 SIK1P57059 783 aa28.53■■■□□ 2.16
SEC22C-207ENST00000423701 SLC39A6Q13433 755 aa28.53■■■□□ 2.16
SEC22C-207ENST00000423701 UBR2Q8IWV8 1755 aa28.52■■■□□ 2.16
SEC22C-207ENST00000423701 C5P01031 1676 aa28.52■■■□□ 2.16
SEC22C-207ENST00000423701 ZNF831Q5JPB2 1677 aa28.52■■■□□ 2.16
SEC22C-207ENST00000423701 KCPQ6ZWJ8 1503 aa28.52■■■□□ 2.16
SEC22C-207ENST00000423701 TAF1LQ8IZX4 1826 aa28.51■■■□□ 2.15
SEC22C-207ENST00000423701 ANO8Q9HCE9 1232 aaPredicted RBP28.51■■■□□ 2.15
SEC22C-207ENST00000423701 TRIM35Q9UPQ4 493 aa28.51■■■□□ 2.15
SEC22C-207ENST00000423701 RBM42Q9BTD8 480 aaKnown RBP28.49■■■□□ 2.15
SEC22C-207ENST00000423701 BTBD11A6QL63 1104 aa28.48■■■□□ 2.15
SEC22C-207ENST00000423701 PTCD1O75127 700 aaKnown RBP28.48■■■□□ 2.15
SEC22C-207ENST00000423701 SLC4A9Q96Q91 983 aa28.48■■■□□ 2.15
SEC22C-207ENST00000423701 CICQ96RK0 1608 aaPredicted RBP28.48■■■□□ 2.15
SEC22C-207ENST00000423701 NBPF14Q5TI25 921 aa28.47■■■□□ 2.15
SEC22C-207ENST00000423701 ATP6V1AP38606 617 aa28.46■■■□□ 2.15
SEC22C-207ENST00000423701 ZNF790Q6PG37 636 aa28.46■■■□□ 2.15
SEC22C-207ENST00000423701 TJP1Q07157 1748 aa28.46■■■□□ 2.15
SEC22C-207ENST00000423701 KDM3BQ7LBC6 1761 aa28.46■■■□□ 2.15
SEC22C-207ENST00000423701 SENP3-EIF4A1A0A087X0R7 540 aa28.46■■■□□ 2.15
SEC22C-207ENST00000423701 ITPK1Q13572 414 aa28.46■■■□□ 2.15
SEC22C-207ENST00000423701 TAF7Q15545 349 aaPredicted RBP28.46■■■□□ 2.15
SEC22C-207ENST00000423701 TTC5Q8N0Z6 440 aa28.46■■■□□ 2.15
SEC22C-207ENST00000423701 C4BP0C0L5 1744 aa28.44■■■□□ 2.14
SEC22C-207ENST00000423701 COL5A3P25940 1745 aaPredicted RBP28.44■■■□□ 2.14
SEC22C-207ENST00000423701 ZNF827Q17R98 1081 aa28.44■■■□□ 2.14
SEC22C-207ENST00000423701 KCNQ3O43525 872 aa28.43■■■□□ 2.14
SEC22C-207ENST00000423701 R3HDM1Q15032 1099 aaKnown RBP28.42■■■□□ 2.14
SEC22C-207ENST00000423701 STK32BQ9NY57 414 aa28.42■■■□□ 2.14
SEC22C-207ENST00000423701 MIS18AQ9NYP9 233 aa28.42■■■□□ 2.14
SEC22C-207ENST00000423701 SLC15A2Q16348 729 aa28.41■■■□□ 2.14
SEC22C-207ENST00000423701 LINC00116Q8NCU8 138 aa28.41■■■□□ 2.14
SEC22C-207ENST00000423701 AKT1S1Q96B36 256 aa28.41■■■□□ 2.14
SEC22C-207ENST00000423701 ZNF496Q96IT1 587 aaPredicted RBP28.41■■■□□ 2.14
SEC22C-207ENST00000423701 PSDA5PKW4 1024 aaPredicted RBP28.4■■■□□ 2.14
SEC22C-207ENST00000423701 TUBGCP6Q96RT7 1819 aa28.4■■■□□ 2.14
SEC22C-207ENST00000423701 HMGB2P26583 209 aaKnown RBP28.39■■■□□ 2.13
SEC22C-207ENST00000423701 HEG1Q9ULI3 1381 aa28.38■■■□□ 2.13
SEC22C-207ENST00000423701 CCDC27Q2M243 656 aa28.38■■■□□ 2.13
SEC22C-207ENST00000423701 VSIG10Q8N0Z9 540 aa28.38■■■□□ 2.13
SEC22C-207ENST00000423701 FMNL2Q96PY5 1086 aa28.38■■■□□ 2.13
SEC22C-207ENST00000423701 QSER1Q2KHR3 1735 aa28.37■■■□□ 2.13
SEC22C-207ENST00000423701 NCBP3Q53F19 620 aaKnown RBP28.36■■■□□ 2.13
SEC22C-207ENST00000423701 DNAJC10Q8IXB1 793 aa28.36■■■□□ 2.13
SEC22C-207ENST00000423701 TSPYL4Q9UJ04 414 aa28.35■■■□□ 2.13
SEC22C-207ENST00000423701 BABAM1Q9NWV8 329 aa28.34■■■□□ 2.13
SEC22C-207ENST00000423701 WWC1Q8IX03 1113 aa28.34■■■□□ 2.13
SEC22C-207ENST00000423701 AK7Q96M32 723 aa28.34■■■□□ 2.13
SEC22C-207ENST00000423701 TFCP2L1Q9NZI6 479 aa28.34■■■□□ 2.13
SEC22C-207ENST00000423701 SALL2Q9Y467 1007 aaPredicted RBP28.34■■■□□ 2.13
SEC22C-207ENST00000423701 CASZ1Q86V15 1759 aa28.33■■■□□ 2.13
SEC22C-207ENST00000423701 UBR3Q6ZT12 1888 aa28.33■■■□□ 2.13
SEC22C-207ENST00000423701 CNTNAP4Q9C0A0 1308 aa28.33■■■□□ 2.13
SEC22C-207ENST00000423701 CALD1Q05682 793 aaKnown RBP28.33■■■□□ 2.13
SEC22C-207ENST00000423701 CHL1O00533 1208 aa28.32■■■□□ 2.12
SEC22C-207ENST00000423701 LAS1LQ9Y4W2 734 aaKnown RBP28.32■■■□□ 2.12
SEC22C-207ENST00000423701 MYH14Q7Z406 1995 aaKnown RBP28.31■■■□□ 2.12
SEC22C-207ENST00000423701 CRKLP46109 303 aaKnown RBP28.3■■■□□ 2.12
SEC22C-207ENST00000423701 EIF4A1P60842 406 aaKnown RBP28.3■■■□□ 2.12
SEC22C-207ENST00000423701 CFAP44Q96MT7 982 aa28.3■■■□□ 2.12
SEC22C-207ENST00000423701 PNPLA7Q6ZV29 1317 aa28.3■■■□□ 2.12
SEC22C-207ENST00000423701 GNPATO15228 680 aa28.29■■■□□ 2.12
SEC22C-207ENST00000423701 CYP19A1P11511 503 aaPredicted RBP28.29■■■□□ 2.12
SEC22C-207ENST00000423701 RC3H1Q5TC82 1133 aaKnown RBP28.29■■■□□ 2.12
SEC22C-207ENST00000423701 AMIGO3Q86WK7 504 aa28.29■■■□□ 2.12
SEC22C-207ENST00000423701 PDGFDQ9GZP0 370 aaPredicted RBP28.29■■■□□ 2.12
SEC22C-207ENST00000423701 PRAMEF22A3QJZ6 481 aa28.28■■■□□ 2.12
SEC22C-207ENST00000423701 ZNF853P0CG23 659 aa28.28■■■□□ 2.12
SEC22C-207ENST00000423701 NGEFQ8N5V2 710 aa28.28■■■□□ 2.12
SEC22C-207ENST00000423701 IFT57Q9NWB7 429 aa28.28■■■□□ 2.12
SEC22C-207ENST00000423701 LAMB4A4D0S4 1761 aa28.28■■■□□ 2.12
SEC22C-207ENST00000423701 SNRPA1P09661 255 aaKnown RBP28.27■■■□□ 2.12
SEC22C-207ENST00000423701 TEX13AQ9BXU3 409 aaPredicted RBP28.27■■■□□ 2.12
SEC22C-207ENST00000423701 GNAI1P63096 354 aa28.26■■■□□ 2.11
SEC22C-207ENST00000423701 INTS5Q6P9B9 1019 aaKnown RBP28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms