RNA–Protein interactions for RNA: ENST00000422933.5

HDLBP-209, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-209ENST00000422933 TAF7Q15545 349 aaPredicted RBP13.01□□□□□ -0.33
HDLBP-209ENST00000422933 NFATC2IPQ8NCF5 419 aa13.01□□□□□ -0.33
HDLBP-209ENST00000422933 LGR6Q9HBX8 967 aa13.01□□□□□ -0.33
HDLBP-209ENST00000422933 DOT1LQ8TEK3 1739 aa13.01□□□□□ -0.33
HDLBP-209ENST00000422933 ITGB4P16144 1822 aa13.01□□□□□ -0.33
HDLBP-209ENST00000422933 SBF2Q86WG5 1849 aa13.01□□□□□ -0.33
HDLBP-209ENST00000422933 BTBD11A6QL63 1104 aa13□□□□□ -0.33
HDLBP-209ENST00000422933 EZH2Q15910 746 aaKnown RBP13□□□□□ -0.33
HDLBP-209ENST00000422933 IL17REQ8NFR9 667 aa13□□□□□ -0.33
HDLBP-209ENST00000422933 LAS1LQ9Y4W2 734 aaKnown RBP13□□□□□ -0.33
HDLBP-209ENST00000422933 APBA3O96018 575 aa12.99□□□□□ -0.33
HDLBP-209ENST00000422933 GNAI1P63096 354 aa12.99□□□□□ -0.33
HDLBP-209ENST00000422933 DCTN1Q14203 1278 aa12.99□□□□□ -0.33
HDLBP-209ENST00000422933 WDR63Q8IWG1 891 aa12.99□□□□□ -0.33
HDLBP-209ENST00000422933 CAMKK2Q96RR4 588 aa12.99□□□□□ -0.33
HDLBP-209ENST00000422933 BABAM1Q9NWV8 329 aa12.99□□□□□ -0.33
HDLBP-209ENST00000422933 NHSQ6T4R5 1651 aa12.99□□□□□ -0.33
HDLBP-209ENST00000422933 KDM6AO15550 1401 aaPredicted RBP12.98□□□□□ -0.33
HDLBP-209ENST00000422933 CEMIPQ8WUJ3 1361 aa12.98□□□□□ -0.33
HDLBP-209ENST00000422933 WWC1Q8IX03 1113 aa12.98□□□□□ -0.33
HDLBP-209ENST00000422933 TRIM35Q9UPQ4 493 aa12.98□□□□□ -0.33
HDLBP-209ENST00000422933 IL16Q14005 1332 aa12.97□□□□□ -0.33
HDLBP-209ENST00000422933 PIGBQ92521 554 aa12.97□□□□□ -0.33
HDLBP-209ENST00000422933 CHMP4AQ9BY43 222 aa12.97□□□□□ -0.33
HDLBP-209ENST00000422933 MYH16Q9H6N6 1097 aa12.97□□□□□ -0.33
HDLBP-209ENST00000422933 TSPYL4Q9UJ04 414 aa12.97□□□□□ -0.33
HDLBP-209ENST00000422933 SENP3-EIF4A1A0A087X0R7 540 aa12.96□□□□□ -0.33
HDLBP-209ENST00000422933 KCNQ2O43526 872 aa12.96□□□□□ -0.33
HDLBP-209ENST00000422933 GOLGA2Q08379 1002 aa12.96□□□□□ -0.33
HDLBP-209ENST00000422933 CFAP44Q96MT7 982 aa12.96□□□□□ -0.33
HDLBP-209ENST00000422933 IFT57Q9NWB7 429 aa12.96□□□□□ -0.33
HDLBP-209ENST00000422933 ADAMTS7Q9UKP4 1686 aa12.96□□□□□ -0.34
HDLBP-209ENST00000422933 BTAF1O14981 1849 aa12.95□□□□□ -0.34
HDLBP-209ENST00000422933 RBM42Q9BTD8 480 aaKnown RBP12.95□□□□□ -0.34
HDLBP-209ENST00000422933 THUMPD2Q9BTF0 503 aaKnown RBP12.95□□□□□ -0.34
HDLBP-209ENST00000422933 TOGARAM1Q9Y4F4 1720 aa12.95□□□□□ -0.34
HDLBP-209ENST00000422933 MRC1P22897 1456 aa12.94□□□□□ -0.34
HDLBP-209ENST00000422933 PLSCR1O15162 318 aa12.94□□□□□ -0.34
HDLBP-209ENST00000422933 ZNF790Q6PG37 636 aa12.94□□□□□ -0.34
HDLBP-209ENST00000422933 FMNL2Q96PY5 1086 aa12.94□□□□□ -0.34
HDLBP-209ENST00000422933 TEX13AQ9BXU3 409 aaPredicted RBP12.94□□□□□ -0.34
HDLBP-209ENST00000422933 E9PSI1 815 aa12.93□□□□□ -0.34
HDLBP-209ENST00000422933 SLC27A3Q5K4L6 730 aa12.93□□□□□ -0.34
HDLBP-209ENST00000422933 YTHDC1Q96MU7 727 aaKnown RBP12.93□□□□□ -0.34
HDLBP-209ENST00000422933 SIPA1L3O60292 1781 aaPredicted RBP12.93□□□□□ -0.34
HDLBP-209ENST00000422933 PALLDQ8WX93 1383 aa12.93□□□□□ -0.34
HDLBP-209ENST00000422933 ZBED9Q6R2W3 1325 aa12.92□□□□□ -0.34
HDLBP-209ENST00000422933 CASZ1Q86V15 1759 aa12.92□□□□□ -0.34
HDLBP-209ENST00000422933 CHL1O00533 1208 aa12.92□□□□□ -0.34
HDLBP-209ENST00000422933 PTCD1O75127 700 aaKnown RBP12.92□□□□□ -0.34
HDLBP-209ENST00000422933 SLC39A6Q13433 755 aa12.92□□□□□ -0.34
HDLBP-209ENST00000422933 ATG3Q9NT62 314 aa12.92□□□□□ -0.34
HDLBP-209ENST00000422933 ASAP1Q9ULH1 1129 aa12.92□□□□□ -0.34
HDLBP-209ENST00000422933 ATP6V1AP38606 617 aa12.91□□□□□ -0.34
HDLBP-209ENST00000422933 NPM2Q86SE8 214 aaKnown RBP12.91□□□□□ -0.34
HDLBP-209ENST00000422933 VSIG10Q8N0Z9 540 aa12.91□□□□□ -0.34
HDLBP-209ENST00000422933 MIS18AQ9NYP9 233 aa12.91□□□□□ -0.34
HDLBP-209ENST00000422933 CCNL1Q9UK58 526 aaPredicted RBP12.91□□□□□ -0.34
HDLBP-209ENST00000422933 RGPD3A6NKT7 1758 aaPredicted RBP12.91□□□□□ -0.34
HDLBP-209ENST00000422933 RGPD4Q7Z3J3 1758 aa12.91□□□□□ -0.34
HDLBP-209ENST00000422933 LOC102724428A0A0B4J2F2 783 aa12.9□□□□□ -0.34
HDLBP-209ENST00000422933 STARD3NLO95772 234 aa12.9□□□□□ -0.34
HDLBP-209ENST00000422933 SNRPA1P09661 255 aaKnown RBP12.9□□□□□ -0.34
HDLBP-209ENST00000422933 SIK1P57059 783 aa12.9□□□□□ -0.34
HDLBP-209ENST00000422933 NBPF14Q5TI25 921 aa12.89□□□□□ -0.35
HDLBP-209ENST00000422933 PTF1AQ7RTS3 328 aa12.89□□□□□ -0.35
HDLBP-209ENST00000422933 MBIPQ9NS73 344 aa12.89□□□□□ -0.35
HDLBP-209ENST00000422933 SOS1Q07889 1333 aaPredicted RBP12.88□□□□□ -0.35
HDLBP-209ENST00000422933 ZNF853P0CG23 659 aa12.88□□□□□ -0.35
HDLBP-209ENST00000422933 TXNRD1Q16881 649 aa12.88□□□□□ -0.35
HDLBP-209ENST00000422933 ZNF496Q96IT1 587 aaPredicted RBP12.88□□□□□ -0.35
HDLBP-209ENST00000422933 KDM3BQ7LBC6 1761 aa12.88□□□□□ -0.35
HDLBP-209ENST00000422933 ZNF521Q96K83 1311 aa12.88□□□□□ -0.35
HDLBP-209ENST00000422933 HEG1Q9ULI3 1381 aa12.87□□□□□ -0.35
HDLBP-209ENST00000422933 EIF4A1P60842 406 aaKnown RBP12.87□□□□□ -0.35
HDLBP-209ENST00000422933 SLFN5Q08AF3 891 aa12.87□□□□□ -0.35
HDLBP-209ENST00000422933 LY75O60449 1722 aa12.87□□□□□ -0.35
HDLBP-209ENST00000422933 PAPPAQ13219 1627 aa12.87□□□□□ -0.35
HDLBP-209ENST00000422933 HOXB7P09629 217 aa12.86□□□□□ -0.35
HDLBP-209ENST00000422933 TSR2Q969E8 191 aaKnown RBP12.86□□□□□ -0.35
HDLBP-209ENST00000422933 PDGFDQ9GZP0 370 aaPredicted RBP12.86□□□□□ -0.35
HDLBP-209ENST00000422933 UBR2Q8IWV8 1755 aa12.86□□□□□ -0.35
HDLBP-209ENST00000422933 FANCIQ9NVI1 1328 aa12.86□□□□□ -0.35
HDLBP-209ENST00000422933 KCNQ3O43525 872 aa12.85□□□□□ -0.35
HDLBP-209ENST00000422933 AK7Q96M32 723 aa12.85□□□□□ -0.35
HDLBP-209ENST00000422933 ANO8Q9HCE9 1232 aaPredicted RBP12.85□□□□□ -0.35
HDLBP-209ENST00000422933 ZNF831Q5JPB2 1677 aa12.85□□□□□ -0.35
HDLBP-209ENST00000422933 GIGYF1O75420 1035 aaPredicted RBP12.84□□□□□ -0.35
HDLBP-209ENST00000422933 CT47B1P0C2W7 299 aaPredicted RBP12.84□□□□□ -0.35
HDLBP-209ENST00000422933 EIF2S2P20042 333 aaKnown RBP12.84□□□□□ -0.35
HDLBP-209ENST00000422933 TWISTNBQ3B726 338 aaPredicted RBP12.84□□□□□ -0.35
HDLBP-209ENST00000422933 CCDC30Q5VVM6 783 aa12.84□□□□□ -0.35
HDLBP-209ENST00000422933 DUSP27Q5VZP5 1158 aa12.84□□□□□ -0.35
HDLBP-209ENST00000422933 STK31Q9BXU1 1019 aa12.84□□□□□ -0.35
HDLBP-209ENST00000422933 STK32BQ9NY57 414 aa12.84□□□□□ -0.35
HDLBP-209ENST00000422933 ELL2O00472 640 aaPredicted RBP12.83□□□□□ -0.36
HDLBP-209ENST00000422933 EXOSC9Q06265 439 aaKnown RBP12.83□□□□□ -0.36
HDLBP-209ENST00000422933 HDGFL1Q5TGJ6 251 aa12.83□□□□□ -0.36
HDLBP-209ENST00000422933 DNAJC10Q8IXB1 793 aa12.83□□□□□ -0.36
HDLBP-209ENST00000422933 ZNF428Q96B54 188 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 156.4 ms