RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 EXOC6BQ9Y2D4 811 aa11□□□□□ -0.65
SNCA-206ENST00000420646 PXDNQ92626 1479 aa11□□□□□ -0.65
SNCA-206ENST00000420646 HAP1P54257 671 aaPredicted RBP11□□□□□ -0.65
SNCA-206ENST00000420646 ANKRD44Q8N8A2 993 aa11□□□□□ -0.65
SNCA-206ENST00000420646 C22orf23Q9BZE7 217 aa11□□□□□ -0.65
SNCA-206ENST00000420646 DCTPP1Q9H773 170 aa11□□□□□ -0.65
SNCA-206ENST00000420646 EIF4A1P60842 406 aaKnown RBP11□□□□□ -0.65
SNCA-206ENST00000420646 SLC39A6Q13433 755 aa11□□□□□ -0.65
SNCA-206ENST00000420646 ATP10DQ9P241 1426 aa11□□□□□ -0.65
SNCA-206ENST00000420646 CSB-PGBD3P0DP91 1061 aa10.99□□□□□ -0.65
SNCA-206ENST00000420646 GSPT1P15170 499 aaKnown RBP10.99□□□□□ -0.65
SNCA-206ENST00000420646 PNMA6EA0A0J9YXQ4 647 aa10.99□□□□□ -0.65
SNCA-206ENST00000420646 PLEKHO1Q53GL0 409 aaPredicted RBP10.99□□□□□ -0.65
SNCA-206ENST00000420646 C1orf141Q5JVX7 400 aa10.99□□□□□ -0.65
SNCA-206ENST00000420646 CHMP4BQ9H444 224 aaKnown RBP10.99□□□□□ -0.65
SNCA-206ENST00000420646 PROSER3Q2NL68 480 aa10.98□□□□□ -0.65
SNCA-206ENST00000420646 PLEKHM2Q8IWE5 1019 aa10.98□□□□□ -0.65
SNCA-206ENST00000420646 AKAP4Q5JQC9 854 aa10.98□□□□□ -0.65
SNCA-206ENST00000420646 TBC1D2Q9BYX2 928 aa10.98□□□□□ -0.65
SNCA-206ENST00000420646 ERBB3P21860 1342 aa10.98□□□□□ -0.65
SNCA-206ENST00000420646 CEMIPQ8WUJ3 1361 aa10.98□□□□□ -0.65
SNCA-206ENST00000420646 RNMTO43148 476 aaKnown RBP10.98□□□□□ -0.65
SNCA-206ENST00000420646 PIP4K2AP48426 406 aaPredicted RBP10.98□□□□□ -0.65
SNCA-206ENST00000420646 RTL5Q5HYW3 569 aaPredicted RBP10.98□□□□□ -0.65
SNCA-206ENST00000420646 TBC1D9Q6ZT07 1266 aa10.97□□□□□ -0.65
SNCA-206ENST00000420646 LRRFIP2Q9Y608 721 aaKnown RBP10.97□□□□□ -0.65
SNCA-206ENST00000420646 MST1RQ04912 1400 aa10.97□□□□□ -0.65
SNCA-206ENST00000420646 PI4KAP2A4QPH2 592 aa10.97□□□□□ -0.65
SNCA-206ENST00000420646 PI4KAP1Q8N8J0 262 aa10.97□□□□□ -0.65
SNCA-206ENST00000420646 STRCP1A6NGW2 1772 aa10.96□□□□□ -0.65
SNCA-206ENST00000420646 CCT4P50991 539 aaKnown RBP10.96□□□□□ -0.65
SNCA-206ENST00000420646 NFKBIBQ15653 356 aa10.96□□□□□ -0.65
SNCA-206ENST00000420646 BMP2KLQ5H9B9 411 aa10.96□□□□□ -0.65
SNCA-206ENST00000420646 RPAP2Q8IXW5 612 aaPredicted RBP10.96□□□□□ -0.65
SNCA-206ENST00000420646 USP44Q9H0E7 712 aa10.96□□□□□ -0.65
SNCA-206ENST00000420646 FRAT2O75474 233 aaPredicted RBP10.96□□□□□ -0.66
SNCA-206ENST00000420646 DEKP35659 375 aaKnown RBP10.96□□□□□ -0.66
SNCA-206ENST00000420646 NBPF7P0C2Y1 421 aaPredicted RBP10.95□□□□□ -0.66
SNCA-206ENST00000420646 AIMP1Q12904 312 aaKnown RBP10.95□□□□□ -0.66
SNCA-206ENST00000420646 NFATC2IPQ8NCF5 419 aa10.95□□□□□ -0.66
SNCA-206ENST00000420646 RBM42Q9BTD8 480 aaKnown RBP10.95□□□□□ -0.66
SNCA-206ENST00000420646 GNAI2P04899 355 aa10.95□□□□□ -0.66
SNCA-206ENST00000420646 CADPS2Q86UW7 1296 aa10.95□□□□□ -0.66
SNCA-206ENST00000420646 RAPGEF4Q8WZA2 1011 aa10.95□□□□□ -0.66
SNCA-206ENST00000420646 BRINP3Q76B58 766 aa10.94□□□□□ -0.66
SNCA-206ENST00000420646 MED1Q15648 1581 aaPredicted RBP10.94□□□□□ -0.66
SNCA-206ENST00000420646 RGPD5Q99666 1765 aa10.94□□□□□ -0.66
SNCA-206ENST00000420646 AMOTQ4VCS5 1084 aa10.94□□□□□ -0.66
SNCA-206ENST00000420646 VIRMAQ69YN4 1812 aaKnown RBP10.94□□□□□ -0.66
SNCA-206ENST00000420646 IL1RAPL2Q9NP60 686 aa10.93□□□□□ -0.66
SNCA-206ENST00000420646 GIGYF1O75420 1035 aaPredicted RBP10.93□□□□□ -0.66
SNCA-206ENST00000420646 NPHP3Q7Z494 1330 aa10.93□□□□□ -0.66
SNCA-206ENST00000420646 CWF19L2Q2TBE0 894 aaKnown RBP10.93□□□□□ -0.66
SNCA-206ENST00000420646 USP35Q9P2H5 1018 aa10.93□□□□□ -0.66
SNCA-206ENST00000420646 USP54Q70EL1 1684 aa10.92□□□□□ -0.66
SNCA-206ENST00000420646 CD2BP2O95400 341 aaKnown RBP10.92□□□□□ -0.66
SNCA-206ENST00000420646 MYL6BP14649 208 aa10.92□□□□□ -0.66
SNCA-206ENST00000420646 SDSP20132 328 aa10.92□□□□□ -0.66
SNCA-206ENST00000420646 TTC22Q5TAA0 569 aa10.92□□□□□ -0.66
SNCA-206ENST00000420646 FOXD4L1Q9NU39 408 aa10.92□□□□□ -0.66
SNCA-206ENST00000420646 LRRC37A3O60309 1634 aa10.92□□□□□ -0.66
SNCA-206ENST00000420646 SLIT3O75094 1523 aa10.92□□□□□ -0.66
SNCA-206ENST00000420646 UBTFL1P0CB47 393 aaPredicted RBP10.92□□□□□ -0.66
SNCA-206ENST00000420646 BECN1Q14457 450 aa10.92□□□□□ -0.66
SNCA-206ENST00000420646 ILDR2Q71H61 639 aa10.92□□□□□ -0.66
SNCA-206ENST00000420646 TRPM3Q9HCF6 1732 aaPredicted RBP10.92□□□□□ -0.66
SNCA-206ENST00000420646 CYP27B1O15528 508 aa10.91□□□□□ -0.66
SNCA-206ENST00000420646 JARID2Q92833 1246 aaPredicted RBP10.91□□□□□ -0.66
SNCA-206ENST00000420646 SRCIN1Q9C0H9 1055 aa10.91□□□□□ -0.66
SNCA-206ENST00000420646 SPATA31A3Q5VYP0 1347 aa10.91□□□□□ -0.66
SNCA-206ENST00000420646 KIF2CQ99661 725 aa10.91□□□□□ -0.66
SNCA-206ENST00000420646 SLAIN2Q9P270 581 aa10.91□□□□□ -0.66
SNCA-206ENST00000420646 MAP3K2Q9Y2U5 619 aa10.91□□□□□ -0.66
SNCA-206ENST00000420646 PPP1R42Q7Z4L9 355 aa10.91□□□□□ -0.66
SNCA-206ENST00000420646 DNAAF4Q8WXU2 420 aa10.91□□□□□ -0.66
SNCA-206ENST00000420646 MEGF6O75095 1541 aa10.9□□□□□ -0.66
SNCA-206ENST00000420646 HMMRO75330 724 aa10.9□□□□□ -0.66
SNCA-206ENST00000420646 GNAI3P08754 354 aa10.9□□□□□ -0.66
SNCA-206ENST00000420646 BEND3Q5T5X7 828 aa10.9□□□□□ -0.66
SNCA-206ENST00000420646 STRN4Q9NRL3 753 aa10.9□□□□□ -0.66
SNCA-206ENST00000420646 BABAM1Q9NWV8 329 aa10.9□□□□□ -0.66
SNCA-206ENST00000420646 MAP4K4O95819 1239 aaPredicted RBP10.9□□□□□ -0.66
SNCA-206ENST00000420646 PHKG2P15735 406 aa10.9□□□□□ -0.66
SNCA-206ENST00000420646 TATP17735 454 aaPredicted RBP10.9□□□□□ -0.66
SNCA-206ENST00000420646 ATP8B2P98198 1209 aa10.9□□□□□ -0.66
SNCA-206ENST00000420646 NUTM1Q86Y26 1132 aa10.9□□□□□ -0.66
SNCA-206ENST00000420646 ZNF496Q96IT1 587 aaPredicted RBP10.9□□□□□ -0.66
SNCA-206ENST00000420646 PRDM11Q9NQV5 511 aa10.9□□□□□ -0.66
SNCA-206ENST00000420646 ADCY9O60503 1353 aa10.9□□□□□ -0.67
SNCA-206ENST00000420646 SRGAP3O43295 1099 aa10.89□□□□□ -0.67
SNCA-206ENST00000420646 ZNF790Q6PG37 636 aa10.89□□□□□ -0.67
SNCA-206ENST00000420646 CDC45O75419 566 aa10.89□□□□□ -0.67
SNCA-206ENST00000420646 SURF6O75683 361 aaKnown RBP10.89□□□□□ -0.67
SNCA-206ENST00000420646 PDE1AP54750 535 aa10.89□□□□□ -0.67
SNCA-206ENST00000420646 DBF4Q9UBU7 674 aaPredicted RBP10.89□□□□□ -0.67
SNCA-206ENST00000420646 USP16Q9Y5T5 823 aa10.89□□□□□ -0.67
SNCA-206ENST00000420646 ANTXR1Q9H6X2 564 aa10.89□□□□□ -0.67
SNCA-206ENST00000420646 ANO8Q9HCE9 1232 aaPredicted RBP10.89□□□□□ -0.67
SNCA-206ENST00000420646 TOM1L2Q6ZVM7 507 aa10.88□□□□□ -0.67
SNCA-206ENST00000420646 LRRCC1Q9C099 1032 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms