RNA–Protein interactions for RNA: ENST00000419895.3

AP002884.3-203, humanhuman

TSL 2 BASIC

Gene AP002884.3, Length 1,711 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002884.3-203ENST00000419895 UPF1Q92900 1129 aaKnown RBP eCLIP34.37■■■■□ 3.09
AP002884.3-203ENST00000419895 ASAP1Q9ULH1 1129 aa34.37■■■■□ 3.09
AP002884.3-203ENST00000419895 ATG3Q9NT62 314 aa34.35■■■■□ 3.09
AP002884.3-203ENST00000419895 MIS18AQ9NYP9 233 aa34.35■■■■□ 3.09
AP002884.3-203ENST00000419895 SLC39A6Q13433 755 aa34.34■■■■□ 3.09
AP002884.3-203ENST00000419895 TAF7Q15545 349 aaPredicted RBP34.34■■■■□ 3.09
AP002884.3-203ENST00000419895 APBA3O96018 575 aa34.33■■■■□ 3.09
AP002884.3-203ENST00000419895 ZNF521Q96K83 1311 aa34.33■■■■□ 3.09
AP002884.3-203ENST00000419895 NGEFQ8N5V2 710 aa34.33■■■■□ 3.09
AP002884.3-203ENST00000419895 HNRNPUQ00839 825 aaKnown RBP eCLIP34.32■■■■□ 3.08
AP002884.3-203ENST00000419895 BTAF1O14981 1849 aa34.31■■■■□ 3.08
AP002884.3-203ENST00000419895 KCNQ3O43525 872 aa34.3■■■■□ 3.08
AP002884.3-203ENST00000419895 SIPA1L3O60292 1781 aaPredicted RBP34.3■■■■□ 3.08
AP002884.3-203ENST00000419895 BTBD11A6QL63 1104 aa34.3■■■■□ 3.08
AP002884.3-203ENST00000419895 TNS1Q9HBL0 1735 aaKnown RBP34.29■■■■□ 3.08
AP002884.3-203ENST00000419895 CCDC125Q86Z20 511 aa34.27■■■■□ 3.08
AP002884.3-203ENST00000419895 DEFB132Q7Z7B7 95 aa34.27■■■■□ 3.08
AP002884.3-203ENST00000419895 ZNF853P0CG23 659 aa34.26■■■■□ 3.07
AP002884.3-203ENST00000419895 ZNF790Q6PG37 636 aa34.26■■■■□ 3.07
AP002884.3-203ENST00000419895 SPINK5Q9NQ38 1064 aaPredicted RBP34.26■■■■□ 3.07
AP002884.3-203ENST00000419895 CHL1O00533 1208 aa34.25■■■■□ 3.07
AP002884.3-203ENST00000419895 PLSCR1O15162 318 aa34.25■■■■□ 3.07
AP002884.3-203ENST00000419895 LAS1LQ9Y4W2 734 aaKnown RBP34.25■■■■□ 3.07
AP002884.3-203ENST00000419895 WDR63Q8IWG1 891 aa34.24■■■■□ 3.07
AP002884.3-203ENST00000419895 PROM2Q8N271 834 aa34.24■■■■□ 3.07
AP002884.3-203ENST00000419895 CFAP44Q96MT7 982 aa34.24■■■■□ 3.07
AP002884.3-203ENST00000419895 EN1Q05925 392 aaPredicted RBP34.24■■■■□ 3.07
AP002884.3-203ENST00000419895 PALLDQ8WX93 1383 aa34.23■■■■□ 3.07
AP002884.3-203ENST00000419895 SF3B2Q13435 895 aaKnown RBP34.23■■■■□ 3.07
AP002884.3-203ENST00000419895 PTCD1O75127 700 aaKnown RBP34.21■■■■□ 3.07
AP002884.3-203ENST00000419895 SLC4A9Q96Q91 983 aa34.21■■■■□ 3.07
AP002884.3-203ENST00000419895 CALD1Q05682 793 aaKnown RBP34.21■■■■□ 3.07
AP002884.3-203ENST00000419895 SMARCC1Q92922 1105 aaPredicted RBP34.21■■■■□ 3.07
AP002884.3-203ENST00000419895 CAMKK2Q96RR4 588 aa34.21■■■■□ 3.07
AP002884.3-203ENST00000419895 IFT57Q9NWB7 429 aa34.21■■■■□ 3.07
AP002884.3-203ENST00000419895 KCNQ4P56696 695 aa34.2■■■■□ 3.07
AP002884.3-203ENST00000419895 ZNF496Q96IT1 587 aaPredicted RBP34.2■■■■□ 3.07
AP002884.3-203ENST00000419895 TSPYL4Q9UJ04 414 aa34.2■■■■□ 3.07
AP002884.3-203ENST00000419895 MBIPQ9NS73 344 aa34.19■■■■□ 3.06
AP002884.3-203ENST00000419895 IL16Q14005 1332 aa34.19■■■■□ 3.06
AP002884.3-203ENST00000419895 EZH2Q15910 746 aaKnown RBP34.18■■■■□ 3.06
AP002884.3-203ENST00000419895 BABAM1Q9NWV8 329 aa34.18■■■■□ 3.06
AP002884.3-203ENST00000419895 PAPPAQ13219 1627 aa34.18■■■■□ 3.06
AP002884.3-203ENST00000419895 GNAI1P63096 354 aa34.17■■■■□ 3.06
AP002884.3-203ENST00000419895 TTC5Q8N0Z6 440 aa34.17■■■■□ 3.06
AP002884.3-203ENST00000419895 CDCA7LQ96GN5 454 aa34.17■■■■□ 3.06
AP002884.3-203ENST00000419895 RBM42Q9BTD8 480 aaKnown RBP34.17■■■■□ 3.06
AP002884.3-203ENST00000419895 LOC102724428A0A0B4J2F2 783 aa34.16■■■■□ 3.06
AP002884.3-203ENST00000419895 BAG6P46379 1132 aa34.16■■■■□ 3.06
AP002884.3-203ENST00000419895 SIK1P57059 783 aa34.16■■■■□ 3.06
AP002884.3-203ENST00000419895 LRRC4BQ9NT99 713 aa34.16■■■■□ 3.06
AP002884.3-203ENST00000419895 KCPQ6ZWJ8 1503 aa34.16■■■■□ 3.06
AP002884.3-203ENST00000419895 TXNRD1Q16881 649 aa34.16■■■■□ 3.06
AP002884.3-203ENST00000419895 TSR2Q969E8 191 aaKnown RBP34.16■■■■□ 3.06
AP002884.3-203ENST00000419895 EIF4A1P60842 406 aaKnown RBP34.15■■■■□ 3.06
AP002884.3-203ENST00000419895 GOLGA2Q08379 1002 aa34.14■■■■□ 3.06
AP002884.3-203ENST00000419895 KDM3BQ7LBC6 1761 aa34.13■■■■□ 3.05
AP002884.3-203ENST00000419895 KRT24Q2M2I5 525 aa34.13■■■■□ 3.05
AP002884.3-203ENST00000419895 YTHDC1Q96MU7 727 aaKnown RBP34.12■■■■□ 3.05
AP002884.3-203ENST00000419895 ZBED9Q6R2W3 1325 aa34.12■■■■□ 3.05
AP002884.3-203ENST00000419895 LY75O60449 1722 aa34.12■■■■□ 3.05
AP002884.3-203ENST00000419895 UBR2Q8IWV8 1755 aa34.11■■■■□ 3.05
AP002884.3-203ENST00000419895 ITPK1Q13572 414 aa34.11■■■■□ 3.05
AP002884.3-203ENST00000419895 CCNL1Q9UK58 526 aaPredicted RBP34.11■■■■□ 3.05
AP002884.3-203ENST00000419895 HEG1Q9ULI3 1381 aa34.1■■■■□ 3.05
AP002884.3-203ENST00000419895 PRAMEF22A3QJZ6 481 aa34.1■■■■□ 3.05
AP002884.3-203ENST00000419895 FMNL2Q96PY5 1086 aa34.1■■■■□ 3.05
AP002884.3-203ENST00000419895 ATP6V1AP38606 617 aa34.1■■■■□ 3.05
AP002884.3-203ENST00000419895 SLFN5Q08AF3 891 aa34.1■■■■□ 3.05
AP002884.3-203ENST00000419895 FANCIQ9NVI1 1328 aa34.08■■■■□ 3.05
AP002884.3-203ENST00000419895 SLC27A3Q5K4L6 730 aa34.07■■■■□ 3.05
AP002884.3-203ENST00000419895 SOCS7O14512 581 aa34.07■■■■□ 3.04
AP002884.3-203ENST00000419895 TRMT2AQ8IZ69 625 aaKnown RBP34.06■■■■□ 3.04
AP002884.3-203ENST00000419895 GIGYF1O75420 1035 aaPredicted RBP34.05■■■■□ 3.04
AP002884.3-203ENST00000419895 DNAJC10Q8IXB1 793 aa34.05■■■■□ 3.04
AP002884.3-203ENST00000419895 VSIG10Q8N0Z9 540 aa34.05■■■■□ 3.04
AP002884.3-203ENST00000419895 RGPD3A6NKT7 1758 aaPredicted RBP34.05■■■■□ 3.04
AP002884.3-203ENST00000419895 RGPD4Q7Z3J3 1758 aa34.05■■■■□ 3.04
AP002884.3-203ENST00000419895 E9PSI1 815 aa34.04■■■■□ 3.04
AP002884.3-203ENST00000419895 C8orf58Q8NAV2 365 aa34.04■■■■□ 3.04
AP002884.3-203ENST00000419895 USP16Q9Y5T5 823 aa34.03■■■■□ 3.04
AP002884.3-203ENST00000419895 SNRPA1P09661 255 aaKnown RBP34.02■■■■□ 3.04
AP002884.3-203ENST00000419895 LINC00116Q8NCU8 138 aa34.02■■■■□ 3.04
AP002884.3-203ENST00000419895 MYH16Q9H6N6 1097 aa34.02■■■■□ 3.04
AP002884.3-203ENST00000419895 TSPYL6Q8N831 410 aa34.01■■■■□ 3.04
AP002884.3-203ENST00000419895 ELL2O00472 640 aaPredicted RBP34.01■■■■□ 3.03
AP002884.3-203ENST00000419895 DUSP27Q5VZP5 1158 aa34■■■■□ 3.03
AP002884.3-203ENST00000419895 CYP19A1P11511 503 aaPredicted RBP33.99■■■■□ 3.03
AP002884.3-203ENST00000419895 ZNF831Q5JPB2 1677 aa33.98■■■■□ 3.03
AP002884.3-203ENST00000419895 EXOSC9Q06265 439 aaKnown RBP33.98■■■■□ 3.03
AP002884.3-203ENST00000419895 TJP1Q07157 1748 aa33.98■■■■□ 3.03
AP002884.3-203ENST00000419895 RREB1Q92766 1687 aa33.95■■■■□ 3.03
AP002884.3-203ENST00000419895 TEX13AQ9BXU3 409 aaPredicted RBP33.94■■■■□ 3.02
AP002884.3-203ENST00000419895 ANO8Q9HCE9 1232 aaPredicted RBP33.94■■■■□ 3.02
AP002884.3-203ENST00000419895 C5P01031 1676 aa33.93■■■■□ 3.02
AP002884.3-203ENST00000419895 TAF1LQ8IZX4 1826 aa33.93■■■■□ 3.02
AP002884.3-203ENST00000419895 INTS5Q6P9B9 1019 aaKnown RBP33.93■■■■□ 3.02
AP002884.3-203ENST00000419895 CICQ96RK0 1608 aaPredicted RBP33.93■■■■□ 3.02
AP002884.3-203ENST00000419895 CRKLP46109 303 aaKnown RBP33.92■■■■□ 3.02
AP002884.3-203ENST00000419895 ZNF827Q17R98 1081 aa33.92■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms