RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.12■□□□□ 0.49
HLA-DPA1-242ENST00000419277 PARP4Q9UKK3 1724 aaKnown RBP18.11■□□□□ 0.49
HLA-DPA1-242ENST00000419277 RGPD5Q99666 1765 aa18.11■□□□□ 0.49
HLA-DPA1-242ENST00000419277 SCN11AQ9UI33 1791 aa18.11■□□□□ 0.49
HLA-DPA1-242ENST00000419277 GNAI2P04899 355 aa18.11■□□□□ 0.49
HLA-DPA1-242ENST00000419277 ANKRD24Q8TF21 1146 aa18.11■□□□□ 0.49
HLA-DPA1-242ENST00000419277 CPDO75976 1380 aa18.11■□□□□ 0.49
HLA-DPA1-242ENST00000419277 IBTKQ9P2D0 1353 aaPredicted RBP18.11■□□□□ 0.49
HLA-DPA1-242ENST00000419277 PXDNQ92626 1479 aa18.11■□□□□ 0.49
HLA-DPA1-242ENST00000419277 SEC24BO95487 1268 aa18.1■□□□□ 0.49
HLA-DPA1-242ENST00000419277 ZNF530Q6P9A1 599 aaPredicted RBP18.1■□□□□ 0.49
HLA-DPA1-242ENST00000419277 C22orf23Q9BZE7 217 aa18.1■□□□□ 0.49
HLA-DPA1-242ENST00000419277 C1orf115Q9H7X2 142 aa18.1■□□□□ 0.49
HLA-DPA1-242ENST00000419277 PKD1L3Q7Z443 1732 aa18.1■□□□□ 0.49
HLA-DPA1-242ENST00000419277 RBM25P49756 843 aaKnown RBP18.09■□□□□ 0.49
HLA-DPA1-242ENST00000419277 FKBP5Q13451 457 aaPredicted RBP18.09■□□□□ 0.49
HLA-DPA1-242ENST00000419277 HDGFL1Q5TGJ6 251 aa18.09■□□□□ 0.49
HLA-DPA1-242ENST00000419277 XIRP1Q702N8 1843 aaKnown RBP18.09■□□□□ 0.49
HLA-DPA1-242ENST00000419277 RBM33Q96EV2 1170 aaKnown RBP18.09■□□□□ 0.49
HLA-DPA1-242ENST00000419277 MIS18AQ9NYP9 233 aa18.09■□□□□ 0.49
HLA-DPA1-242ENST00000419277 EIF4A1P60842 406 aaKnown RBP18.08■□□□□ 0.48
HLA-DPA1-242ENST00000419277 MEIS3Q99687 375 aa18.08■□□□□ 0.48
HLA-DPA1-242ENST00000419277 HDAC5Q9UQL6 1122 aa18.08■□□□□ 0.48
HLA-DPA1-242ENST00000419277 USHBP1Q8N6Y0 703 aa18.07■□□□□ 0.48
HLA-DPA1-242ENST00000419277 MRC1P22897 1456 aa18.07■□□□□ 0.48
HLA-DPA1-242ENST00000419277 HEG1Q9ULI3 1381 aa18.07■□□□□ 0.48
HLA-DPA1-242ENST00000419277 CDC45O75419 566 aa18.06■□□□□ 0.48
HLA-DPA1-242ENST00000419277 RNMTO43148 476 aaKnown RBP18.05■□□□□ 0.48
HLA-DPA1-242ENST00000419277 CASC1Q6TDU7 716 aa18.05■□□□□ 0.48
HLA-DPA1-242ENST00000419277 BTBD11A6QL63 1104 aa18.04■□□□□ 0.48
HLA-DPA1-242ENST00000419277 LMOD2Q6P5Q4 547 aa18.04■□□□□ 0.48
HLA-DPA1-242ENST00000419277 SLC4A10Q6U841 1118 aa18.04■□□□□ 0.48
HLA-DPA1-242ENST00000419277 G2E3Q7L622 706 aa18.04■□□□□ 0.48
HLA-DPA1-242ENST00000419277 RAPGEF4Q8WZA2 1011 aa18.04■□□□□ 0.48
HLA-DPA1-242ENST00000419277 OSBPL3Q9H4L5 887 aa18.04■□□□□ 0.48
HLA-DPA1-242ENST00000419277 STRCQ7RTU9 1775 aa18.04■□□□□ 0.48
HLA-DPA1-242ENST00000419277 MFAP1P55081 439 aaKnown RBP18.03■□□□□ 0.48
HLA-DPA1-242ENST00000419277 NBR1Q14596 966 aa18.03■□□□□ 0.48
HLA-DPA1-242ENST00000419277 DBF4Q9UBU7 674 aaPredicted RBP18.03■□□□□ 0.48
HLA-DPA1-242ENST00000419277 SPATA31A3Q5VYP0 1347 aa18.03■□□□□ 0.48
HLA-DPA1-242ENST00000419277 TTC22Q5TAA0 569 aa18.03■□□□□ 0.48
HLA-DPA1-242ENST00000419277 PLEKHM2Q8IWE5 1019 aa18.03■□□□□ 0.48
HLA-DPA1-242ENST00000419277 LRRC59Q96AG4 307 aaKnown RBP18.03■□□□□ 0.48
HLA-DPA1-242ENST00000419277 SPG7Q9UQ90 795 aa18.03■□□□□ 0.48
HLA-DPA1-242ENST00000419277 HSP90AB1P08238 724 aaKnown RBP18.02■□□□□ 0.48
HLA-DPA1-242ENST00000419277 TUBGCP6Q96RT7 1819 aa18.02■□□□□ 0.47
HLA-DPA1-242ENST00000419277 XPCQ01831 940 aaPredicted RBP18.01■□□□□ 0.47
HLA-DPA1-242ENST00000419277 IL27Q8NEV9 243 aa18.01■□□□□ 0.47
HLA-DPA1-242ENST00000419277 SNX21Q969T3 373 aa18.01■□□□□ 0.47
HLA-DPA1-242ENST00000419277 AOX1Q06278 1338 aa18.01■□□□□ 0.47
HLA-DPA1-242ENST00000419277 SRCIN1Q9C0H9 1055 aa18.01■□□□□ 0.47
HLA-DPA1-242ENST00000419277 ZBTB7CA1YPR0 619 aa18■□□□□ 0.47
HLA-DPA1-242ENST00000419277 F6X3S4 739 aa18■□□□□ 0.47
HLA-DPA1-242ENST00000419277 UBTFL1P0CB47 393 aaPredicted RBP18■□□□□ 0.47
HLA-DPA1-242ENST00000419277 TATP17735 454 aaPredicted RBP18■□□□□ 0.47
HLA-DPA1-242ENST00000419277 ATP8B2P98198 1209 aa17.99■□□□□ 0.47
HLA-DPA1-242ENST00000419277 TBC1D9Q6ZT07 1266 aa17.99■□□□□ 0.47
HLA-DPA1-242ENST00000419277 HSCBQ8IWL3 235 aa17.99■□□□□ 0.47
HLA-DPA1-242ENST00000419277 LGR6Q9HBX8 967 aa17.99■□□□□ 0.47
HLA-DPA1-242ENST00000419277 ABCA3Q99758 1704 aa17.98■□□□□ 0.47
HLA-DPA1-242ENST00000419277 TBC1D2Q9BYX2 928 aa17.98■□□□□ 0.47
HLA-DPA1-242ENST00000419277 HYPKQ9NX55 129 aa17.98■□□□□ 0.47
HLA-DPA1-242ENST00000419277 AXIN2Q9Y2T1 843 aa17.98■□□□□ 0.47
HLA-DPA1-242ENST00000419277 LAMB4A4D0S4 1761 aa17.98■□□□□ 0.47
HLA-DPA1-242ENST00000419277 RAB11FIP3O75154 756 aa17.98■□□□□ 0.47
HLA-DPA1-242ENST00000419277 ALDH1L1O75891 902 aa17.98■□□□□ 0.47
HLA-DPA1-242ENST00000419277 HSP90AB4PQ58FF6 505 aa17.98■□□□□ 0.47
HLA-DPA1-242ENST00000419277 DNAAF4Q8WXU2 420 aa17.98■□□□□ 0.47
HLA-DPA1-242ENST00000419277 LRRCC1Q9C099 1032 aa17.98■□□□□ 0.47
HLA-DPA1-242ENST00000419277 MPRIPQ6WCQ1 1025 aa17.97■□□□□ 0.47
HLA-DPA1-242ENST00000419277 NHSL1Q5SYE7 1610 aa17.97■□□□□ 0.47
HLA-DPA1-242ENST00000419277 GIGYF1O75420 1035 aaPredicted RBP17.96■□□□□ 0.47
HLA-DPA1-242ENST00000419277 DDX58O95786 925 aaKnown RBP17.96■□□□□ 0.47
HLA-DPA1-242ENST00000419277 IFNL2Q8IZJ0 200 aa17.96■□□□□ 0.47
HLA-DPA1-242ENST00000419277 EPB41L2O43491 1005 aaKnown RBP17.95■□□□□ 0.46
HLA-DPA1-242ENST00000419277 GSPT1P15170 499 aaKnown RBP17.95■□□□□ 0.46
HLA-DPA1-242ENST00000419277 NFKBIBQ15653 356 aa17.95■□□□□ 0.46
HLA-DPA1-242ENST00000419277 SSH3Q8TE77 659 aa17.95■□□□□ 0.46
HLA-DPA1-242ENST00000419277 USP44Q9H0E7 712 aa17.95■□□□□ 0.46
HLA-DPA1-242ENST00000419277 CHPF2Q9P2E5 772 aa17.95■□□□□ 0.46
HLA-DPA1-242ENST00000419277 MEGF6O75095 1541 aa17.95■□□□□ 0.46
HLA-DPA1-242ENST00000419277 REC8O95072 547 aa17.95■□□□□ 0.46
HLA-DPA1-242ENST00000419277 DCAF5Q96JK2 942 aa17.95■□□□□ 0.46
HLA-DPA1-242ENST00000419277 SOS2Q07890 1332 aaPredicted RBP17.94■□□□□ 0.46
HLA-DPA1-242ENST00000419277 KDM6AO15550 1401 aaPredicted RBP17.94■□□□□ 0.46
HLA-DPA1-242ENST00000419277 SLC4A3P48751 1232 aa17.94■□□□□ 0.46
HLA-DPA1-242ENST00000419277 ZC3H6P61129 1189 aaKnown RBP17.94■□□□□ 0.46
HLA-DPA1-242ENST00000419277 MTX1Q13505 466 aa17.94■□□□□ 0.46
HLA-DPA1-242ENST00000419277 SLC52A2Q9HAB3 445 aa17.94■□□□□ 0.46
HLA-DPA1-242ENST00000419277 NLRP2Q9NX02 1062 aa17.94■□□□□ 0.46
HLA-DPA1-242ENST00000419277 PHKG2P15735 406 aa17.93■□□□□ 0.46
HLA-DPA1-242ENST00000419277 BEND3Q5T5X7 828 aa17.93■□□□□ 0.46
HLA-DPA1-242ENST00000419277 ANTXR1Q9H6X2 564 aa17.93■□□□□ 0.46
HLA-DPA1-242ENST00000419277 SALL3Q9BXA9 1300 aa17.93■□□□□ 0.46
HLA-DPA1-242ENST00000419277 C5P01031 1676 aa17.93■□□□□ 0.46
HLA-DPA1-242ENST00000419277 DDX21Q9NR30 783 aaKnown RBP eCLIP17.92■□□□□ 0.46
HLA-DPA1-242ENST00000419277 STAP2Q9UGK3 403 aa17.92■□□□□ 0.46
HLA-DPA1-242ENST00000419277 ADCY9O60503 1353 aa17.92■□□□□ 0.46
HLA-DPA1-242ENST00000419277 EIF2S2P20042 333 aaKnown RBP17.92■□□□□ 0.46
HLA-DPA1-242ENST00000419277 PDE1AP54750 535 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms