RNA–Protein interactions for RNA: ENST00000419193.6

CAPN8-203, Transcript of calpain 8, humanhuman

TSL 5

Gene CAPN8, Length 1,399 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8-203ENST00000419193 RGPD3A6NKT7 1758 aaPredicted RBP17.63■□□□□ 0.41
CAPN8-203ENST00000419193 RGPD4Q7Z3J3 1758 aa17.63■□□□□ 0.41
CAPN8-203ENST00000419193 TATP17735 454 aaPredicted RBP17.63■□□□□ 0.41
CAPN8-203ENST00000419193 PPP4R2Q9NY27 417 aa17.63■□□□□ 0.41
CAPN8-203ENST00000419193 DCTN1Q14203 1278 aa17.62■□□□□ 0.41
CAPN8-203ENST00000419193 MTHFSDQ2M296 383 aaKnown RBP17.62■□□□□ 0.41
CAPN8-203ENST00000419193 BCAR3O75815 825 aa17.61■□□□□ 0.41
CAPN8-203ENST00000419193 EXOSC9Q06265 439 aaKnown RBP17.61■□□□□ 0.41
CAPN8-203ENST00000419193 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.61■□□□□ 0.41
CAPN8-203ENST00000419193 ANO8Q9HCE9 1232 aaPredicted RBP17.61■□□□□ 0.41
CAPN8-203ENST00000419193 DLG5Q8TDM6 1919 aa17.61■□□□□ 0.41
CAPN8-203ENST00000419193 SLC15A2Q16348 729 aa17.6■□□□□ 0.41
CAPN8-203ENST00000419193 GAS2L2Q8NHY3 880 aa17.6■□□□□ 0.41
CAPN8-203ENST00000419193 PRIM1P49642 420 aaKnown RBP17.59■□□□□ 0.41
CAPN8-203ENST00000419193 GNAI1P63096 354 aa17.59■□□□□ 0.41
CAPN8-203ENST00000419193 NHSQ6T4R5 1651 aa17.59■□□□□ 0.41
CAPN8-203ENST00000419193 MCM10Q7L590 875 aa17.58■□□□□ 0.4
CAPN8-203ENST00000419193 EXOC6Q8TAG9 804 aa17.58■□□□□ 0.4
CAPN8-203ENST00000419193 IFT57Q9NWB7 429 aa17.58■□□□□ 0.4
CAPN8-203ENST00000419193 RARSP54136 660 aaKnown RBP17.57■□□□□ 0.4
CAPN8-203ENST00000419193 RTF1Q92541 710 aaKnown RBP17.57■□□□□ 0.4
CAPN8-203ENST00000419193 MEGF6O75095 1541 aa17.57■□□□□ 0.4
CAPN8-203ENST00000419193 SLC27A3Q5K4L6 730 aa17.56■□□□□ 0.4
CAPN8-203ENST00000419193 CRBNQ96SW2 442 aa17.56■□□□□ 0.4
CAPN8-203ENST00000419193 PCDH11XQ9BZA7 1347 aa17.56■□□□□ 0.4
CAPN8-203ENST00000419193 PCDH11YQ9BZA8 1340 aa17.56■□□□□ 0.4
CAPN8-203ENST00000419193 RGPD2P0DJD1 1756 aa17.56■□□□□ 0.4
CAPN8-203ENST00000419193 CT47B1P0C2W7 299 aaPredicted RBP17.55■□□□□ 0.4
CAPN8-203ENST00000419193 ZNF853P0CG23 659 aa17.55■□□□□ 0.4
CAPN8-203ENST00000419193 CANXP27824 592 aaKnown RBP17.55■□□□□ 0.4
CAPN8-203ENST00000419193 C20orf194Q5TEA3 1177 aa17.55■□□□□ 0.4
CAPN8-203ENST00000419193 DCAF8L1A6NGE4 600 aa17.54■□□□□ 0.4
CAPN8-203ENST00000419193 ZBTB7AO95365 584 aa17.54■□□□□ 0.4
CAPN8-203ENST00000419193 B4GALNT3Q6L9W6 998 aa17.54■□□□□ 0.4
CAPN8-203ENST00000419193 CFAP44Q96MT7 982 aa17.54■□□□□ 0.4
CAPN8-203ENST00000419193 BCL2L13Q9BXK5 485 aa17.54■□□□□ 0.4
CAPN8-203ENST00000419193 MBIPQ9NS73 344 aa17.54■□□□□ 0.4
CAPN8-203ENST00000419193 FRAT1Q92837 279 aaPredicted RBP17.53■□□□□ 0.4
CAPN8-203ENST00000419193 SPG7Q9UQ90 795 aa17.53■□□□□ 0.4
CAPN8-203ENST00000419193 GNAT3A8MTJ3 354 aa17.53■□□□□ 0.4
CAPN8-203ENST00000419193 HMGB2P26583 209 aaKnown RBP17.53■□□□□ 0.4
CAPN8-203ENST00000419193 HTATSF1O43719 755 aaKnown RBP17.52■□□□□ 0.39
CAPN8-203ENST00000419193 PLEKHO1Q53GL0 409 aaPredicted RBP17.52■□□□□ 0.39
CAPN8-203ENST00000419193 LRRC4BQ9NT99 713 aa17.52■□□□□ 0.39
CAPN8-203ENST00000419193 ATF5Q9Y2D1 282 aaPredicted RBP17.52■□□□□ 0.39
CAPN8-203ENST00000419193 MAP3K5Q99683 1374 aa17.51■□□□□ 0.39
CAPN8-203ENST00000419193 KAT6BQ8WYB5 2073 aa17.51■□□□□ 0.39
CAPN8-203ENST00000419193 BTAF1O14981 1849 aa17.51■□□□□ 0.39
CAPN8-203ENST00000419193 PDGFDQ9GZP0 370 aaPredicted RBP17.51■□□□□ 0.39
CAPN8-203ENST00000419193 MTFR1LQ9H019 292 aa17.51■□□□□ 0.39
CAPN8-203ENST00000419193 SMC4Q9NTJ3 1288 aa17.51■□□□□ 0.39
CAPN8-203ENST00000419193 NCAPD2Q15021 1401 aa17.51■□□□□ 0.39
CAPN8-203ENST00000419193 ZNF530Q6P9A1 599 aaPredicted RBP17.5■□□□□ 0.39
CAPN8-203ENST00000419193 CCDC136Q96JN2 1154 aa17.5■□□□□ 0.39
CAPN8-203ENST00000419193 ELL2O00472 640 aaPredicted RBP17.49■□□□□ 0.39
CAPN8-203ENST00000419193 CHL1O00533 1208 aa17.49■□□□□ 0.39
CAPN8-203ENST00000419193 MPRIPQ6WCQ1 1025 aa17.49■□□□□ 0.39
CAPN8-203ENST00000419193 PELP1Q8IZL8 1130 aaKnown RBP17.49■□□□□ 0.39
CAPN8-203ENST00000419193 SSH1Q8WYL5 1049 aa17.49■□□□□ 0.39
CAPN8-203ENST00000419193 TFCP2L1Q9NZI6 479 aa17.49■□□□□ 0.39
CAPN8-203ENST00000419193 CCNL1Q9UK58 526 aaPredicted RBP17.49■□□□□ 0.39
CAPN8-203ENST00000419193 CYP27B1O15528 508 aa17.48■□□□□ 0.39
CAPN8-203ENST00000419193 AMOTQ4VCS5 1084 aa17.48■□□□□ 0.39
CAPN8-203ENST00000419193 TSPYL6Q8N831 410 aa17.48■□□□□ 0.39
CAPN8-203ENST00000419193 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.48■□□□□ 0.39
CAPN8-203ENST00000419193 ZNF827Q17R98 1081 aa17.47■□□□□ 0.39
CAPN8-203ENST00000419193 C8orf58Q8NAV2 365 aa17.47■□□□□ 0.39
CAPN8-203ENST00000419193 IL17REQ8NFR9 667 aa17.47■□□□□ 0.39
CAPN8-203ENST00000419193 MIS18AQ9NYP9 233 aa17.47■□□□□ 0.39
CAPN8-203ENST00000419193 VAMP4O75379 141 aa17.46■□□□□ 0.39
CAPN8-203ENST00000419193 KCNQ4P56696 695 aa17.46■□□□□ 0.39
CAPN8-203ENST00000419193 TWISTNBQ3B726 338 aaPredicted RBP17.46■□□□□ 0.39
CAPN8-203ENST00000419193 AKT1S1Q96B36 256 aa17.46■□□□□ 0.39
CAPN8-203ENST00000419193 TSPYL4Q9UJ04 414 aa17.46■□□□□ 0.39
CAPN8-203ENST00000419193 DOT1LQ8TEK3 1739 aa17.46■□□□□ 0.39
CAPN8-203ENST00000419193 PDE3AQ14432 1141 aa17.45■□□□□ 0.38
CAPN8-203ENST00000419193 ALDH1L2Q3SY69 923 aa17.45■□□□□ 0.38
CAPN8-203ENST00000419193 AKAP4Q5JQC9 854 aa17.45■□□□□ 0.38
CAPN8-203ENST00000419193 C1orf141Q5JVX7 400 aa17.45■□□□□ 0.38
CAPN8-203ENST00000419193 IFNL2Q8IZJ0 200 aa17.45■□□□□ 0.38
CAPN8-203ENST00000419193 PANK1Q8TE04 598 aa17.45■□□□□ 0.38
CAPN8-203ENST00000419193 SLC16A10Q8TF71 515 aa17.45■□□□□ 0.38
CAPN8-203ENST00000419193 SMARCC1Q92922 1105 aaPredicted RBP17.45■□□□□ 0.38
CAPN8-203ENST00000419193 TNNQ9UQP3 1299 aa17.45■□□□□ 0.38
CAPN8-203ENST00000419193 CASZ1Q86V15 1759 aa17.44■□□□□ 0.38
CAPN8-203ENST00000419193 PTGER2P43116 358 aa17.44■□□□□ 0.38
CAPN8-203ENST00000419193 ZKSCAN2Q63HK3 967 aa17.44■□□□□ 0.38
CAPN8-203ENST00000419193 SHANK3Q9BYB0 1731 aa17.44■□□□□ 0.38
CAPN8-203ENST00000419193 TCERG1O14776 1098 aaKnown RBP17.43■□□□□ 0.38
CAPN8-203ENST00000419193 MSH5O43196 834 aa17.43■□□□□ 0.38
CAPN8-203ENST00000419193 NKX1-1Q15270 411 aaPredicted RBP17.43■□□□□ 0.38
CAPN8-203ENST00000419193 KRT24Q2M2I5 525 aa17.43■□□□□ 0.38
CAPN8-203ENST00000419193 ZNF428Q96B54 188 aa17.43■□□□□ 0.38
CAPN8-203ENST00000419193 NOB1Q9ULX3 412 aaKnown RBP17.43■□□□□ 0.38
CAPN8-203ENST00000419193 POLD1P28340 1107 aa17.42■□□□□ 0.38
CAPN8-203ENST00000419193 TAF7Q15545 349 aaPredicted RBP17.42■□□□□ 0.38
CAPN8-203ENST00000419193 CLUAP1Q96AJ1 413 aa17.42■□□□□ 0.38
CAPN8-203ENST00000419193 LGR6Q9HBX8 967 aa17.42■□□□□ 0.38
CAPN8-203ENST00000419193 COG6Q9Y2V7 657 aa17.42■□□□□ 0.38
CAPN8-203ENST00000419193 PALLDQ8WX93 1383 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms