RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 CCDC69A6NI79 296 aa20.31■□□□□ 0.84
SYNGAP1-202ENST00000418600 DCTN1Q14203 1278 aa20.31■□□□□ 0.84
SYNGAP1-202ENST00000418600 SRGAP3O43295 1099 aa20.3■□□□□ 0.84
SYNGAP1-202ENST00000418600 EYA3Q99504 573 aa20.3■□□□□ 0.84
SYNGAP1-202ENST00000418600 DBF4Q9UBU7 674 aaPredicted RBP20.3■□□□□ 0.84
SYNGAP1-202ENST00000418600 ZNF76P36508 570 aa20.3■□□□□ 0.84
SYNGAP1-202ENST00000418600 UTP14AQ9BVJ6 771 aaKnown RBP20.3■□□□□ 0.84
SYNGAP1-202ENST00000418600 YEATS2Q9ULM3 1422 aa20.3■□□□□ 0.84
SYNGAP1-202ENST00000418600 HOOK1Q9UJC3 728 aaKnown RBP20.3■□□□□ 0.84
SYNGAP1-202ENST00000418600 EIF6P56537 245 aaKnown RBP20.29■□□□□ 0.84
SYNGAP1-202ENST00000418600 DZIP3Q86Y13 1208 aaKnown RBP20.29■□□□□ 0.84
SYNGAP1-202ENST00000418600 ABCC1P33527 1531 aa20.29■□□□□ 0.84
SYNGAP1-202ENST00000418600 ANKRD18AQ8IVF6 992 aa20.29■□□□□ 0.84
SYNGAP1-202ENST00000418600 WDR63Q8IWG1 891 aa20.29■□□□□ 0.84
SYNGAP1-202ENST00000418600 ATP6V1DQ9Y5K8 247 aa20.29■□□□□ 0.84
SYNGAP1-202ENST00000418600 TMEM2Q9UHN6 1383 aa20.29■□□□□ 0.84
SYNGAP1-202ENST00000418600 TMEM94Q12767 1356 aa20.29■□□□□ 0.84
SYNGAP1-202ENST00000418600 CABP5Q9NP86 173 aa20.29■□□□□ 0.84
SYNGAP1-202ENST00000418600 BIN2Q9UBW5 565 aaPredicted RBP20.28■□□□□ 0.84
SYNGAP1-202ENST00000418600 SPTY2D1Q68D10 685 aaPredicted RBP20.28■□□□□ 0.84
SYNGAP1-202ENST00000418600 LDHCP07864 332 aa20.28■□□□□ 0.84
SYNGAP1-202ENST00000418600 PCMTD1Q96MG8 357 aaPredicted RBP20.28■□□□□ 0.84
SYNGAP1-202ENST00000418600 MPHOSPH6Q99547 160 aaKnown RBP20.28■□□□□ 0.84
SYNGAP1-202ENST00000418600 MKNK2Q9HBH9 465 aa20.28■□□□□ 0.84
SYNGAP1-202ENST00000418600 H0YIN7 160 aa20.27■□□□□ 0.84
SYNGAP1-202ENST00000418600 C1orf115Q9H7X2 142 aa20.27■□□□□ 0.84
SYNGAP1-202ENST00000418600 ZNF408Q9H9D4 720 aa20.27■□□□□ 0.84
SYNGAP1-202ENST00000418600 IFT57Q9NWB7 429 aa20.27■□□□□ 0.84
SYNGAP1-202ENST00000418600 HLA-DOAP06340 250 aa20.27■□□□□ 0.84
SYNGAP1-202ENST00000418600 TSR1Q2NL82 804 aaKnown RBP20.27■□□□□ 0.84
SYNGAP1-202ENST00000418600 AKAP4Q5JQC9 854 aa20.27■□□□□ 0.84
SYNGAP1-202ENST00000418600 SCLT1Q96NL6 688 aa20.27■□□□□ 0.84
SYNGAP1-202ENST00000418600 LRRCC1Q9C099 1032 aa20.27■□□□□ 0.84
SYNGAP1-202ENST00000418600 TMPOP42166 694 aaKnown RBP20.27■□□□□ 0.83
SYNGAP1-202ENST00000418600 PANK1Q8TE04 598 aa20.27■□□□□ 0.83
SYNGAP1-202ENST00000418600 FLAD1Q8NFF5 587 aa20.26■□□□□ 0.83
SYNGAP1-202ENST00000418600 ZBED9Q6R2W3 1325 aa20.26■□□□□ 0.83
SYNGAP1-202ENST00000418600 GSTO1P78417 241 aa20.26■□□□□ 0.83
SYNGAP1-202ENST00000418600 UBAC1Q9BSL1 405 aa20.26■□□□□ 0.83
SYNGAP1-202ENST00000418600 ZNF335Q9H4Z2 1342 aaPredicted RBP20.25■□□□□ 0.83
SYNGAP1-202ENST00000418600 ZNF804AQ7Z570 1209 aa20.25■□□□□ 0.83
SYNGAP1-202ENST00000418600 LNPKQ9C0E8 428 aa20.25■□□□□ 0.83
SYNGAP1-202ENST00000418600 ANKRD36BQ8N2N9 1353 aa20.25■□□□□ 0.83
SYNGAP1-202ENST00000418600 KRT18P05783 430 aaKnown RBP20.25■□□□□ 0.83
SYNGAP1-202ENST00000418600 NUP133Q8WUM0 1156 aa20.25■□□□□ 0.83
SYNGAP1-202ENST00000418600 A0A0U1RQG5 324 aaPredicted RBP20.25■□□□□ 0.83
SYNGAP1-202ENST00000418600 CNBD1Q8NA66 436 aa20.24■□□□□ 0.83
SYNGAP1-202ENST00000418600 VEZTQ9HBM0 779 aa20.24■□□□□ 0.83
SYNGAP1-202ENST00000418600 TNIP1Q15025 636 aa20.24■□□□□ 0.83
SYNGAP1-202ENST00000418600 MAP3K12Q12852 859 aa20.24■□□□□ 0.83
SYNGAP1-202ENST00000418600 KRT27Q7Z3Y8 459 aa20.24■□□□□ 0.83
SYNGAP1-202ENST00000418600 VTI1AQ96AJ9 217 aa20.24■□□□□ 0.83
SYNGAP1-202ENST00000418600 GOLGA6L1Q8N7Z2 621 aa20.23■□□□□ 0.83
SYNGAP1-202ENST00000418600 TARBP1Q13395 1621 aaKnown RBP20.23■□□□□ 0.83
SYNGAP1-202ENST00000418600 CT47B1P0C2W7 299 aaPredicted RBP20.23■□□□□ 0.83
SYNGAP1-202ENST00000418600 AAMPQ13685 434 aa20.23■□□□□ 0.83
SYNGAP1-202ENST00000418600 EAPPQ56P03 285 aaPredicted RBP20.23■□□□□ 0.83
SYNGAP1-202ENST00000418600 PTPRKQ15262 1439 aa20.23■□□□□ 0.83
SYNGAP1-202ENST00000418600 BAG3O95817 575 aa20.22■□□□□ 0.83
SYNGAP1-202ENST00000418600 THUMPD2Q9BTF0 503 aaKnown RBP20.22■□□□□ 0.83
SYNGAP1-202ENST00000418600 BCS1LQ9Y276 419 aa20.22■□□□□ 0.83
SYNGAP1-202ENST00000418600 YTHDC2Q9H6S0 1430 aaKnown RBP20.22■□□□□ 0.83
SYNGAP1-202ENST00000418600 MAGI2Q86UL8 1455 aa20.22■□□□□ 0.83
SYNGAP1-202ENST00000418600 FAM196AQ6ZSG2 479 aa20.22■□□□□ 0.83
SYNGAP1-202ENST00000418600 DCAF5Q96JK2 942 aa20.22■□□□□ 0.83
SYNGAP1-202ENST00000418600 CCDC96Q2M329 555 aa20.22■□□□□ 0.83
SYNGAP1-202ENST00000418600 TPM3P06753 285 aa20.22■□□□□ 0.83
SYNGAP1-202ENST00000418600 UGGT1Q9NYU2 1555 aa20.22■□□□□ 0.83
SYNGAP1-202ENST00000418600 F8W031 263 aaPredicted RBP20.21■□□□□ 0.83
SYNGAP1-202ENST00000418600 ARHGAP27Q6ZUM4 889 aa20.21■□□□□ 0.83
SYNGAP1-202ENST00000418600 ZC3H12CQ9C0D7 883 aaKnown RBP20.21■□□□□ 0.83
SYNGAP1-202ENST00000418600 MAP3K2Q9Y2U5 619 aa20.21■□□□□ 0.83
SYNGAP1-202ENST00000418600 DNAAF4Q8WXU2 420 aa20.21■□□□□ 0.83
SYNGAP1-202ENST00000418600 ATP5J2-PTCD1G3V325 749 aa20.21■□□□□ 0.83
SYNGAP1-202ENST00000418600 ANKRD20A12PQ8NF67 263 aa20.21■□□□□ 0.83
SYNGAP1-202ENST00000418600 ZNF444Q8N0Y2 327 aaPredicted RBP20.21■□□□□ 0.83
SYNGAP1-202ENST00000418600 DPY19L2Q6NUT2 758 aa20.21■□□□□ 0.83
SYNGAP1-202ENST00000418600 SHANK2Q9UPX8 1470 aa20.2■□□□□ 0.82
SYNGAP1-202ENST00000418600 RIMBP2O15034 1052 aa20.2■□□□□ 0.82
SYNGAP1-202ENST00000418600 PAF1Q8N7H5 531 aa20.2■□□□□ 0.82
SYNGAP1-202ENST00000418600 SLC39A6Q13433 755 aa20.2■□□□□ 0.82
SYNGAP1-202ENST00000418600 HSP90AB2PQ58FF8 381 aa20.19■□□□□ 0.82
SYNGAP1-202ENST00000418600 FLT4P35916 1363 aa20.19■□□□□ 0.82
SYNGAP1-202ENST00000418600 CTNNA3Q9UI47 895 aa20.19■□□□□ 0.82
SYNGAP1-202ENST00000418600 MSL1Q68DK7 614 aa20.19■□□□□ 0.82
SYNGAP1-202ENST00000418600 LDHAL6AQ6ZMR3 332 aa20.19■□□□□ 0.82
SYNGAP1-202ENST00000418600 EPS15P42566 896 aa20.19■□□□□ 0.82
SYNGAP1-202ENST00000418600 TNNI2P48788 182 aa20.19■□□□□ 0.82
SYNGAP1-202ENST00000418600 MAST1Q9Y2H9 1570 aa20.18■□□□□ 0.82
SYNGAP1-202ENST00000418600 MAP4K4O95819 1239 aaPredicted RBP20.18■□□□□ 0.82
SYNGAP1-202ENST00000418600 MATR3P43243 847 aaKnown RBP eCLIP20.18■□□□□ 0.82
SYNGAP1-202ENST00000418600 IP6K1Q92551 441 aa20.18■□□□□ 0.82
SYNGAP1-202ENST00000418600 SEC63Q9UGP8 760 aaKnown RBP20.18■□□□□ 0.82
SYNGAP1-202ENST00000418600 TPM1P09493 284 aa20.18■□□□□ 0.82
SYNGAP1-202ENST00000418600 TRIM22Q8IYM9 498 aa20.18■□□□□ 0.82
SYNGAP1-202ENST00000418600 CUL5Q93034 780 aa20.18■□□□□ 0.82
SYNGAP1-202ENST00000418600 SUPT20HQ8NEM7 779 aa20.18■□□□□ 0.82
SYNGAP1-202ENST00000418600 EHMT1Q9H9B1 1298 aa20.18■□□□□ 0.82
SYNGAP1-202ENST00000418600 EXOC6Q8TAG9 804 aa20.17■□□□□ 0.82
SYNGAP1-202ENST00000418600 SMC3Q9UQE7 1217 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms