RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 PELP1Q8IZL8 1130 aaKnown RBP14.19□□□□□ -0.14
RFC1-203ENST00000418436 DDX54Q8TDD1 881 aaKnown RBP14.19□□□□□ -0.14
RFC1-203ENST00000418436 BCL11BQ9C0K0 894 aaPredicted RBP14.19□□□□□ -0.14
RFC1-203ENST00000418436 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.19□□□□□ -0.147e-8■■■■□ 24
RFC1-203ENST00000418436 BAG6P46379 1132 aa14.18□□□□□ -0.14
RFC1-203ENST00000418436 IFNL1Q8IU54 200 aa14.18□□□□□ -0.14
RFC1-203ENST00000418436 BMP2KQ9NSY1 1161 aaPredicted RBP14.18□□□□□ -0.14
RFC1-203ENST00000418436 RGPD3A6NKT7 1758 aaPredicted RBP14.18□□□□□ -0.14
RFC1-203ENST00000418436 RGPD4Q7Z3J3 1758 aa14.18□□□□□ -0.14
RFC1-203ENST00000418436 PCDH11XQ9BZA7 1347 aa14.17□□□□□ -0.14
RFC1-203ENST00000418436 PCDH11YQ9BZA8 1340 aa14.17□□□□□ -0.14
RFC1-203ENST00000418436 PTF1AQ7RTS3 328 aa14.17□□□□□ -0.14
RFC1-203ENST00000418436 AEBP1Q8IUX7 1158 aa14.17□□□□□ -0.14
RFC1-203ENST00000418436 DOT1LQ8TEK3 1739 aa14.17□□□□□ -0.14
RFC1-203ENST00000418436 CYP27B1O15528 508 aa14.16□□□□□ -0.14
RFC1-203ENST00000418436 APBA3O96018 575 aa14.16□□□□□ -0.14
RFC1-203ENST00000418436 EN1Q05925 392 aaPredicted RBP14.16□□□□□ -0.14
RFC1-203ENST00000418436 RALBP1Q15311 655 aa14.16□□□□□ -0.14
RFC1-203ENST00000418436 LHX8Q68G74 356 aa14.16□□□□□ -0.14
RFC1-203ENST00000418436 SULT6B1Q6IMI4 303 aa14.16□□□□□ -0.14
RFC1-203ENST00000418436 CAMKK2Q96RR4 588 aa14.16□□□□□ -0.14
RFC1-203ENST00000418436 SPG7Q9UQ90 795 aa14.16□□□□□ -0.14
RFC1-203ENST00000418436 RREB1Q92766 1687 aa14.16□□□□□ -0.14
RFC1-203ENST00000418436 KAT6BQ8WYB5 2073 aa14.16□□□□□ -0.14
RFC1-203ENST00000418436 BTAF1O14981 1849 aa14.15□□□□□ -0.14
RFC1-203ENST00000418436 KCNQ2O43526 872 aa14.15□□□□□ -0.14
RFC1-203ENST00000418436 CFAP53Q96M91 514 aa14.15□□□□□ -0.14
RFC1-203ENST00000418436 PLSCR1O15162 318 aa14.14□□□□□ -0.15
RFC1-203ENST00000418436 ATN1P54259 1190 aaPredicted RBP14.14□□□□□ -0.15
RFC1-203ENST00000418436 NKX1-1Q15270 411 aaPredicted RBP14.14□□□□□ -0.15
RFC1-203ENST00000418436 ACSBG1Q96GR2 724 aa14.14□□□□□ -0.15
RFC1-203ENST00000418436 TOGARAM1Q9Y4F4 1720 aa14.14□□□□□ -0.15
RFC1-203ENST00000418436 ITGB4P16144 1822 aa14.13□□□□□ -0.15
RFC1-203ENST00000418436 CHRM1P11229 460 aaPredicted RBP14.13□□□□□ -0.15
RFC1-203ENST00000418436 EZH2Q15910 746 aaKnown RBP14.13□□□□□ -0.15
RFC1-203ENST00000418436 AMOTQ4VCS5 1084 aa14.13□□□□□ -0.15
RFC1-203ENST00000418436 PHKG2P15735 406 aa14.12□□□□□ -0.15
RFC1-203ENST00000418436 PLEKHO1Q53GL0 409 aaPredicted RBP14.12□□□□□ -0.15
RFC1-203ENST00000418436 IFNL2Q8IZJ0 200 aa14.12□□□□□ -0.15
RFC1-203ENST00000418436 NUP188Q5SRE5 1749 aa14.12□□□□□ -0.15
RFC1-203ENST00000418436 TTLL13PA6NNM8 815 aa14.11□□□□□ -0.15
RFC1-203ENST00000418436 HMOX1P09601 288 aa14.11□□□□□ -0.15
RFC1-203ENST00000418436 PRIM1P49642 420 aaKnown RBP14.11□□□□□ -0.15
RFC1-203ENST00000418436 SLC39A7Q92504 469 aa14.11□□□□□ -0.15
RFC1-203ENST00000418436 CIZ1Q9ULV3 898 aaPredicted RBP14.11□□□□□ -0.15
RFC1-203ENST00000418436 U2SURPO15042 1029 aaKnown RBP14.1□□□□□ -0.15
RFC1-203ENST00000418436 PRKRIP1Q9H875 184 aaPredicted RBP14.1□□□□□ -0.15
RFC1-203ENST00000418436 NUDCQ9Y266 331 aa14.1□□□□□ -0.15
RFC1-203ENST00000418436 MYBBP1AQ9BQG0 1328 aaKnown RBP14.1□□□□□ -0.15
RFC1-203ENST00000418436 LY75O60449 1722 aa14.09□□□□□ -0.15
RFC1-203ENST00000418436 VIRMAQ69YN4 1812 aaKnown RBP14.08□□□□□ -0.15
RFC1-203ENST00000418436 ZNF530Q6P9A1 599 aaPredicted RBP14.08□□□□□ -0.16
RFC1-203ENST00000418436 METRNQ9UJH8 293 aa14.08□□□□□ -0.16
RFC1-203ENST00000418436 SCN11AQ9UI33 1791 aa14.08□□□□□ -0.16
RFC1-203ENST00000418436 HSP90AB1P08238 724 aaKnown RBP14.07□□□□□ -0.16
RFC1-203ENST00000418436 C7P10643 843 aa14.07□□□□□ -0.16
RFC1-203ENST00000418436 SYTL4Q96C24 671 aaPredicted RBP14.07□□□□□ -0.16
RFC1-203ENST00000418436 RSPH6AQ9H0K4 717 aa14.07□□□□□ -0.16
RFC1-203ENST00000418436 FCHSD2O94868 740 aa14.06□□□□□ -0.16
RFC1-203ENST00000418436 U2AF1L5P0DN76 240 aaPredicted RBP14.06□□□□□ -0.16
RFC1-203ENST00000418436 U2AF1Q01081 240 aaKnown RBP eCLIP14.06□□□□□ -0.16
RFC1-203ENST00000418436 TXNRD1Q16881 649 aa14.06□□□□□ -0.16
RFC1-203ENST00000418436 MTHFSDQ2M296 383 aaKnown RBP14.06□□□□□ -0.16
RFC1-203ENST00000418436 DCAF5Q96JK2 942 aa14.06□□□□□ -0.16
RFC1-203ENST00000418436 ADAMTS7Q9UKP4 1686 aa14.06□□□□□ -0.16
RFC1-203ENST00000418436 KDM6AO15550 1401 aaPredicted RBP14.06□□□□□ -0.16
RFC1-203ENST00000418436 ERVV-2B6SEH9 535 aa14.05□□□□□ -0.16
RFC1-203ENST00000418436 AKAP4Q5JQC9 854 aa14.05□□□□□ -0.16
RFC1-203ENST00000418436 C1orf141Q5JVX7 400 aa14.05□□□□□ -0.16
RFC1-203ENST00000418436 ZNF467Q7Z7K2 595 aaPredicted RBP14.05□□□□□ -0.16
RFC1-203ENST00000418436 PCDHB8Q9UN66 801 aa14.05□□□□□ -0.16
RFC1-203ENST00000418436 PRKAR2BP31323 418 aa14.04□□□□□ -0.16
RFC1-203ENST00000418436 MPRIPQ6WCQ1 1025 aa14.04□□□□□ -0.16
RFC1-203ENST00000418436 PIGBQ92521 554 aa14.04□□□□□ -0.16
RFC1-203ENST00000418436 PHACTR3Q96KR7 559 aa14.03□□□□□ -0.16
RFC1-203ENST00000418436 TMEM106CQ9BVX2 250 aa14.03□□□□□ -0.16
RFC1-203ENST00000418436 PAPPAQ13219 1627 aa14.03□□□□□ -0.16
RFC1-203ENST00000418436 SLC27A3Q5K4L6 730 aa14.02□□□□□ -0.17
RFC1-203ENST00000418436 LRRC4BQ9NT99 713 aa14.02□□□□□ -0.17
RFC1-203ENST00000418436 TMOD3Q9NYL9 352 aa14.02□□□□□ -0.17
RFC1-203ENST00000418436 NBPF14Q5TI25 921 aa14.01□□□□□ -0.17
RFC1-203ENST00000418436 GAS2L2Q8NHY3 880 aa14.01□□□□□ -0.17
RFC1-203ENST00000418436 TRIM35Q9UPQ4 493 aa14.01□□□□□ -0.17
RFC1-203ENST00000418436 MRC1P22897 1456 aa14□□□□□ -0.17
RFC1-203ENST00000418436 PALLDQ8WX93 1383 aa14□□□□□ -0.17
RFC1-203ENST00000418436 TAF1LQ8IZX4 1826 aa14□□□□□ -0.17
RFC1-203ENST00000418436 SMARCC1Q92922 1105 aaPredicted RBP14□□□□□ -0.17
RFC1-203ENST00000418436 PLEKHF1Q96S99 279 aa14□□□□□ -0.17
RFC1-203ENST00000418436 LGR6Q9HBX8 967 aa14□□□□□ -0.17
RFC1-203ENST00000418436 MAP3K5Q99683 1374 aa13.99□□□□□ -0.17
RFC1-203ENST00000418436 ZNF831Q5JPB2 1677 aa13.99□□□□□ -0.17
RFC1-203ENST00000418436 RNMTO43148 476 aaKnown RBP13.99□□□□□ -0.17
RFC1-203ENST00000418436 CABP4P57796 275 aa13.99□□□□□ -0.17
RFC1-203ENST00000418436 R3HDM1Q15032 1099 aaKnown RBP13.99□□□□□ -0.17
RFC1-203ENST00000418436 ANO8Q9HCE9 1232 aaPredicted RBP13.99□□□□□ -0.17
RFC1-203ENST00000418436 DLG5Q8TDM6 1919 aa13.99□□□□□ -0.17
RFC1-203ENST00000418436 SIPA1L3O60292 1781 aaPredicted RBP13.99□□□□□ -0.17
RFC1-203ENST00000418436 C5P01031 1676 aa13.98□□□□□ -0.17
RFC1-203ENST00000418436 PSDA5PKW4 1024 aaPredicted RBP13.98□□□□□ -0.17
RFC1-203ENST00000418436 GNAT3A8MTJ3 354 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms