RNA–Protein interactions for RNA: ENST00000418333.6

TGFA-203, Transcript of transforming growth factor alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFA, Length 1,225 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-203ENST00000418333 LGR6Q9HBX8 967 aa15.16■□□□□ 0.02
TGFA-203ENST00000418333 ZBTB7AO95365 584 aa15.15■□□□□ 0.02
TGFA-203ENST00000418333 HSP90AB1P08238 724 aaKnown RBP15.15■□□□□ 0.02
TGFA-203ENST00000418333 DCTN1Q14203 1278 aa15.15■□□□□ 0.02
TGFA-203ENST00000418333 NKX1-1Q15270 411 aaPredicted RBP15.15■□□□□ 0.02
TGFA-203ENST00000418333 SLC27A3Q5K4L6 730 aa15.15■□□□□ 0.02
TGFA-203ENST00000418333 FAM9BQ8IZU0 186 aa15.15■□□□□ 0.02
TGFA-203ENST00000418333 TMOD3Q9NYL9 352 aa15.15■□□□□ 0.02
TGFA-203ENST00000418333 C5P01031 1676 aa15.15■□□□□ 0.02
TGFA-203ENST00000418333 MRC1P22897 1456 aa15.14■□□□□ 0.01
TGFA-203ENST00000418333 NEUROD2Q15784 382 aa15.14■□□□□ 0.01
TGFA-203ENST00000418333 MCM10Q7L590 875 aa15.14■□□□□ 0.01
TGFA-203ENST00000418333 DCAF5Q96JK2 942 aa15.14■□□□□ 0.01
TGFA-203ENST00000418333 GNAT3A8MTJ3 354 aa15.13■□□□□ 0.01
TGFA-203ENST00000418333 RNMTO43148 476 aaKnown RBP15.13■□□□□ 0.01
TGFA-203ENST00000418333 KCNQ4P56696 695 aa15.13■□□□□ 0.01
TGFA-203ENST00000418333 CABP4P57796 275 aa15.13■□□□□ 0.01
TGFA-203ENST00000418333 PIGBQ92521 554 aa15.13■□□□□ 0.01
TGFA-203ENST00000418333 PDGFDQ9GZP0 370 aaPredicted RBP15.13■□□□□ 0.01
TGFA-203ENST00000418333 NFE2L2Q16236 605 aa15.12■□□□□ 0.01
TGFA-203ENST00000418333 ZNF827Q17R98 1081 aa15.12■□□□□ 0.01
TGFA-203ENST00000418333 THUMPD2Q9BTF0 503 aaKnown RBP15.12■□□□□ 0.01
TGFA-203ENST00000418333 LRRC4BQ9NT99 713 aa15.12■□□□□ 0.01
TGFA-203ENST00000418333 CCNL1Q9UK58 526 aaPredicted RBP15.12■□□□□ 0.01
TGFA-203ENST00000418333 PALLDQ8WX93 1383 aa15.11■□□□□ 0.01
TGFA-203ENST00000418333 TAF1LQ8IZX4 1826 aa15.11■□□□□ 0.01
TGFA-203ENST00000418333 RTF1Q92541 710 aaKnown RBP15.11■□□□□ 0.01
TGFA-203ENST00000418333 RUNDC1Q96C34 613 aa15.11■□□□□ 0.01
TGFA-203ENST00000418333 MTFR1LQ9H019 292 aa15.11■□□□□ 0.01
TGFA-203ENST00000418333 PNNQ9H307 717 aaKnown RBP15.11■□□□□ 0.01
TGFA-203ENST00000418333 NFATC2IPQ8NCF5 419 aa15.1■□□□□ 0.01
TGFA-203ENST00000418333 IL17REQ8NFR9 667 aa15.1■□□□□ 0.01
TGFA-203ENST00000418333 ASAP1Q9ULH1 1129 aa15.1■□□□□ 0.01
TGFA-203ENST00000418333 ATF5Q9Y2D1 282 aaPredicted RBP15.1■□□□□ 0.01
TGFA-203ENST00000418333 TJP1Q07157 1748 aa15.09■□□□□ 0.01
TGFA-203ENST00000418333 UBR2Q8IWV8 1755 aa15.09■□□□□ 0.01
TGFA-203ENST00000418333 DCAF8L1A6NGE4 600 aa15.09■□□□□ 0.01
TGFA-203ENST00000418333 ERVV-2B6SEH9 535 aa15.09■□□□□ 0.01
TGFA-203ENST00000418333 TMPOP42166 694 aaKnown RBP15.09■□□□□ 0.01
TGFA-203ENST00000418333 RIPK4P57078 832 aa15.09■□□□□ 0.01
TGFA-203ENST00000418333 TEFQ10587 303 aa15.09■□□□□ 0.01
TGFA-203ENST00000418333 SLC52A2Q9HAB3 445 aa15.09■□□□□ 0.01
TGFA-203ENST00000418333 TFCP2L1Q9NZI6 479 aa15.09■□□□□ 0.01
TGFA-203ENST00000418333 APAF1O14727 1248 aa15.08■□□□□ 0
TGFA-203ENST00000418333 SLC39A6Q13433 755 aa15.08■□□□□ 0
TGFA-203ENST00000418333 SALL2Q9Y467 1007 aaPredicted RBP15.08■□□□□ 0
TGFA-203ENST00000418333 KDM3BQ7LBC6 1761 aa15.08■□□□□ 0
TGFA-203ENST00000418333 AKT1S1Q96B36 256 aa15.07■□□□□ 0
TGFA-203ENST00000418333 RBM42Q9BTD8 480 aaKnown RBP15.07■□□□□ 0
TGFA-203ENST00000418333 ATG3Q9NT62 314 aa15.07■□□□□ 0
TGFA-203ENST00000418333 CEMIPQ8WUJ3 1361 aa15.07■□□□□ 0
TGFA-203ENST00000418333 KCPQ6ZWJ8 1503 aa15.07■□□□□ 0
TGFA-203ENST00000418333 COL5A3P25940 1745 aaPredicted RBP15.06■□□□□ 0
TGFA-203ENST00000418333 HMGB2P26583 209 aaKnown RBP15.06■□□□□ 0
TGFA-203ENST00000418333 PTGER2P43116 358 aa15.06■□□□□ 0
TGFA-203ENST00000418333 NGEFQ8N5V2 710 aa15.06■□□□□ 0
TGFA-203ENST00000418333 SMARCC1Q92922 1105 aaPredicted RBP15.06■□□□□ 0
TGFA-203ENST00000418333 C4BP0C0L5 1744 aa15.06■□□□□ 0
TGFA-203ENST00000418333 PTCD1O75127 700 aaKnown RBP15.05■□□□□ -0
TGFA-203ENST00000418333 PNPLA7Q6ZV29 1317 aa15.05■□□□□ -0
TGFA-203ENST00000418333 MSH5O43196 834 aa15.04■□□□□ -0
TGFA-203ENST00000418333 POLD1P28340 1107 aa15.04■□□□□ -0
TGFA-203ENST00000418333 MIS18AQ9NYP9 233 aa15.04■□□□□ -0
TGFA-203ENST00000418333 COL24A1Q17RW2 1714 aa15.03■□□□□ -0
TGFA-203ENST00000418333 BTBD11A6QL63 1104 aa15.03■□□□□ -0
TGFA-203ENST00000418333 KCNQ3O43525 872 aa15.03■□□□□ -0
TGFA-203ENST00000418333 HNRNPUQ00839 825 aaKnown RBP eCLIP15.03■□□□□ -0
TGFA-203ENST00000418333 SLC16A10Q8TF71 515 aa15.03■□□□□ -0
TGFA-203ENST00000418333 YTHDC1Q96MU7 727 aaKnown RBP15.03■□□□□ -0
TGFA-203ENST00000418333 TRIM35Q9UPQ4 493 aa15.03■□□□□ -0
TGFA-203ENST00000418333 UBR3Q6ZT12 1888 aa15.02■□□□□ -0
TGFA-203ENST00000418333 LOC102724428A0A0B4J2F2 783 aa15.02■□□□□ -0
TGFA-203ENST00000418333 SIK1P57059 783 aa15.02■□□□□ -0
TGFA-203ENST00000418333 NCBP3Q53F19 620 aaKnown RBP15.02■□□□□ -0
TGFA-203ENST00000418333 TTC5Q8N0Z6 440 aa15.02■□□□□ -0
TGFA-203ENST00000418333 KLHL34Q8N239 644 aa15.02■□□□□ -0
TGFA-203ENST00000418333 ARXQ96QS3 562 aa15.02■□□□□ -0
TGFA-203ENST00000418333 FHDC1Q9C0D6 1143 aaPredicted RBP15.02■□□□□ -0
TGFA-203ENST00000418333 LAS1LQ9Y4W2 734 aaKnown RBP15.02■□□□□ -0
TGFA-203ENST00000418333 ZNF831Q5JPB2 1677 aa15.01□□□□□ -0.01
TGFA-203ENST00000418333 HTATSF1O43719 755 aaKnown RBP15.01□□□□□ -0.01
TGFA-203ENST00000418333 ATP6V1AP38606 617 aa15.01□□□□□ -0.01
TGFA-203ENST00000418333 LMOD3Q0VAK6 560 aa15.01□□□□□ -0.01
TGFA-203ENST00000418333 ITPK1Q13572 414 aa15.01□□□□□ -0.01
TGFA-203ENST00000418333 AK7Q96M32 723 aa15.01□□□□□ -0.01
TGFA-203ENST00000418333 SLC4A9Q96Q91 983 aa15.01□□□□□ -0.01
TGFA-203ENST00000418333 LAMB4A4D0S4 1761 aa15.01□□□□□ -0.01
TGFA-203ENST00000418333 CICQ96RK0 1608 aaPredicted RBP15□□□□□ -0.01
TGFA-203ENST00000418333 ZBED9Q6R2W3 1325 aa15□□□□□ -0.01
TGFA-203ENST00000418333 LINC00116Q8NCU8 138 aa15□□□□□ -0.01
TGFA-203ENST00000418333 SGIP1Q9BQI5 828 aa15□□□□□ -0.01
TGFA-203ENST00000418333 SMIM5Q71RC9 77 aa14.99□□□□□ -0.01
TGFA-203ENST00000418333 TAF7Q15545 349 aaPredicted RBP14.98□□□□□ -0.01
TGFA-203ENST00000418333 ZNF790Q6PG37 636 aa14.98□□□□□ -0.01
TGFA-203ENST00000418333 FLAD1Q8NFF5 587 aa14.98□□□□□ -0.01
TGFA-203ENST00000418333 ZNF496Q96IT1 587 aaPredicted RBP14.98□□□□□ -0.01
TGFA-203ENST00000418333 TSPYL4Q9UJ04 414 aa14.98□□□□□ -0.01
TGFA-203ENST00000418333 MYH14Q7Z406 1995 aaKnown RBP14.98□□□□□ -0.01
TGFA-203ENST00000418333 COL23A1Q86Y22 540 aaPredicted RBP14.97□□□□□ -0.01
TGFA-203ENST00000418333 DNAJC10Q8IXB1 793 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms