RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 CCT4P50991 539 aaKnown RBP14.55□□□□□ -0.08
LIMK1-202ENST00000418310 ANP32BQ92688 251 aaKnown RBP14.55□□□□□ -0.08
LIMK1-202ENST00000418310 CRB1P82279 1406 aa14.55□□□□□ -0.08
LIMK1-202ENST00000418310 NUCB2P80303 420 aa14.55□□□□□ -0.08
LIMK1-202ENST00000418310 NSFL1CQ9UNZ2 370 aaKnown RBP14.55□□□□□ -0.08
LIMK1-202ENST00000418310 LMOD2Q6P5Q4 547 aa14.54□□□□□ -0.08
LIMK1-202ENST00000418310 MPNDQ8N594 471 aa14.54□□□□□ -0.08
LIMK1-202ENST00000418310 PLEKHG3A1L390 1219 aa14.54□□□□□ -0.08
LIMK1-202ENST00000418310 KLHL40Q2TBA0 621 aa14.54□□□□□ -0.08
LIMK1-202ENST00000418310 HDGFL1Q5TGJ6 251 aa14.54□□□□□ -0.08
LIMK1-202ENST00000418310 TMX3Q96JJ7 454 aa14.54□□□□□ -0.08
LIMK1-202ENST00000418310 IL25Q9H293 177 aa14.54□□□□□ -0.08
LIMK1-202ENST00000418310 OVOS2A0A0J9YW53 1432 aa14.53□□□□□ -0.08
LIMK1-202ENST00000418310 OVOS2Q6IE36 1432 aa14.53□□□□□ -0.08
LIMK1-202ENST00000418310 GNAT3A8MTJ3 354 aa14.53□□□□□ -0.08
LIMK1-202ENST00000418310 SURF6O75683 361 aaKnown RBP14.53□□□□□ -0.08
LIMK1-202ENST00000418310 CLCN1P35523 988 aa14.53□□□□□ -0.08
LIMK1-202ENST00000418310 ZSCAN23Q3MJ62 389 aa14.53□□□□□ -0.08
LIMK1-202ENST00000418310 IL17REQ8NFR9 667 aa14.53□□□□□ -0.08
LIMK1-202ENST00000418310 LMBRD1Q9NUN5 540 aa14.53□□□□□ -0.08
LIMK1-202ENST00000418310 ZDHHC9Q9Y397 364 aa14.53□□□□□ -0.08
LIMK1-202ENST00000418310 KIAA0232Q92628 1395 aa14.53□□□□□ -0.08
LIMK1-202ENST00000418310 CCDC30Q5VVM6 783 aa14.53□□□□□ -0.08
LIMK1-202ENST00000418310 SETD1AO15047 1707 aaKnown RBP14.53□□□□□ -0.08
LIMK1-202ENST00000418310 UBTFL1P0CB47 393 aaPredicted RBP14.53□□□□□ -0.08
LIMK1-202ENST00000418310 DDX54Q8TDD1 881 aaKnown RBP14.53□□□□□ -0.08
LIMK1-202ENST00000418310 ADAMTS13Q76LX8 1427 aa14.52□□□□□ -0.08
LIMK1-202ENST00000418310 SYCE3A1L190 88 aa14.52□□□□□ -0.08
LIMK1-202ENST00000418310 PRIM1P49642 420 aaKnown RBP14.52□□□□□ -0.08
LIMK1-202ENST00000418310 XPCQ01831 940 aaPredicted RBP14.52□□□□□ -0.08
LIMK1-202ENST00000418310 ESYT1Q9BSJ8 1104 aa14.52□□□□□ -0.08
LIMK1-202ENST00000418310 DIP2BQ9P265 1576 aa14.52□□□□□ -0.08
LIMK1-202ENST00000418310 FLT4P35916 1363 aa14.52□□□□□ -0.09
LIMK1-202ENST00000418310 GPT2Q8TD30 523 aa14.51□□□□□ -0.09
LIMK1-202ENST00000418310 PTPRUQ92729 1446 aa14.51□□□□□ -0.09
LIMK1-202ENST00000418310 RBSNQ9H1K0 784 aa14.51□□□□□ -0.09
LIMK1-202ENST00000418310 CEP170BQ9Y4F5 1589 aaPredicted RBP14.51□□□□□ -0.09
LIMK1-202ENST00000418310 KCNQ3O43525 872 aa14.51□□□□□ -0.09
LIMK1-202ENST00000418310 OS9Q13438 667 aaPredicted RBP14.51□□□□□ -0.09
LIMK1-202ENST00000418310 KIF24Q5T7B8 1368 aa14.51□□□□□ -0.09
LIMK1-202ENST00000418310 GNAI3P08754 354 aa14.5□□□□□ -0.09
LIMK1-202ENST00000418310 ITSN1Q15811 1721 aa14.5□□□□□ -0.09
LIMK1-202ENST00000418310 PEAK1Q9H792 1746 aa14.5□□□□□ -0.09
LIMK1-202ENST00000418310 HOXC9P31274 260 aa14.5□□□□□ -0.09
LIMK1-202ENST00000418310 SETD1BQ9UPS6 1966 aaKnown RBP14.5□□□□□ -0.09
LIMK1-202ENST00000418310 C3P01024 1663 aa14.5□□□□□ -0.09
LIMK1-202ENST00000418310 KCNA6P17658 529 aa14.5□□□□□ -0.09
LIMK1-202ENST00000418310 LGR6Q9HBX8 967 aa14.5□□□□□ -0.09
LIMK1-202ENST00000418310 SRGAP3O43295 1099 aa14.49□□□□□ -0.09
LIMK1-202ENST00000418310 CPA1P15085 419 aa14.49□□□□□ -0.09
LIMK1-202ENST00000418310 CHMLP26374 656 aa14.49□□□□□ -0.09
LIMK1-202ENST00000418310 PPP1R42Q7Z4L9 355 aa14.49□□□□□ -0.09
LIMK1-202ENST00000418310 USP44Q9H0E7 712 aa14.49□□□□□ -0.09
LIMK1-202ENST00000418310 MON2Q7Z3U7 1717 aa14.49□□□□□ -0.09
LIMK1-202ENST00000418310 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.49□□□□□ -0.09
LIMK1-202ENST00000418310 MCCP23508 829 aa14.49□□□□□ -0.09
LIMK1-202ENST00000418310 TMEM63CQ9P1W3 806 aa14.49□□□□□ -0.09
LIMK1-202ENST00000418310 SBNO1A3KN83 1393 aa14.49□□□□□ -0.09
LIMK1-202ENST00000418310 NBPF7P0C2Y1 421 aaPredicted RBP14.48□□□□□ -0.09
LIMK1-202ENST00000418310 PTMSP20962 102 aa14.48□□□□□ -0.09
LIMK1-202ENST00000418310 LRRC59Q96AG4 307 aaKnown RBP14.48□□□□□ -0.09
LIMK1-202ENST00000418310 ATP8B2P98198 1209 aa14.48□□□□□ -0.09
LIMK1-202ENST00000418310 IGSF1Q8N6C5 1336 aa14.48□□□□□ -0.09
LIMK1-202ENST00000418310 SIRT1Q96EB6 747 aa14.48□□□□□ -0.09
LIMK1-202ENST00000418310 CHPF2Q9P2E5 772 aa14.48□□□□□ -0.09
LIMK1-202ENST00000418310 SPG7Q9UQ90 795 aa14.48□□□□□ -0.09
LIMK1-202ENST00000418310 CYP2E1P05181 493 aaPredicted RBP14.47□□□□□ -0.09
LIMK1-202ENST00000418310 TAF7Q15545 349 aaPredicted RBP14.47□□□□□ -0.09
LIMK1-202ENST00000418310 MPRIPQ6WCQ1 1025 aa14.47□□□□□ -0.09
LIMK1-202ENST00000418310 AGLP35573 1532 aa14.47□□□□□ -0.09
LIMK1-202ENST00000418310 ARHGEF10O15013 1369 aa14.47□□□□□ -0.09
LIMK1-202ENST00000418310 CWC27Q6UX04 472 aaKnown RBP14.47□□□□□ -0.09
LIMK1-202ENST00000418310 TECPR2O15040 1411 aa14.47□□□□□ -0.09
LIMK1-202ENST00000418310 PI4KAP2A4QPH2 592 aa14.47□□□□□ -0.09
LIMK1-202ENST00000418310 MSNP26038 577 aaKnown RBP14.47□□□□□ -0.09
LIMK1-202ENST00000418310 PI4KAP1Q8N8J0 262 aa14.47□□□□□ -0.09
LIMK1-202ENST00000418310 CWC22Q9HCG8 908 aaKnown RBP14.47□□□□□ -0.09
LIMK1-202ENST00000418310 ISY1Q9ULR0 285 aaKnown RBP14.46□□□□□ -0.09
LIMK1-202ENST00000418310 CCDC173Q0VFZ6 552 aa14.46□□□□□ -0.1
LIMK1-202ENST00000418310 SRCIN1Q9C0H9 1055 aa14.45□□□□□ -0.1
LIMK1-202ENST00000418310 USP31Q70CQ4 1352 aa14.45□□□□□ -0.1
LIMK1-202ENST00000418310 SOS1Q07889 1333 aaPredicted RBP14.44□□□□□ -0.1
LIMK1-202ENST00000418310 TTC21AQ8NDW8 1320 aa14.44□□□□□ -0.1
LIMK1-202ENST00000418310 AIMP1Q12904 312 aaKnown RBP14.44□□□□□ -0.1
LIMK1-202ENST00000418310 ARID3AQ99856 593 aa14.44□□□□□ -0.1
LIMK1-202ENST00000418310 OSBPL3Q9H4L5 887 aa14.44□□□□□ -0.1
LIMK1-202ENST00000418310 PA2G4Q9UQ80 394 aaKnown RBP14.44□□□□□ -0.1
LIMK1-202ENST00000418310 GADD45BO75293 160 aaPredicted RBP14.44□□□□□ -0.1
LIMK1-202ENST00000418310 AKAP12Q02952 1782 aa14.44□□□□□ -0.1
LIMK1-202ENST00000418310 NBPF6Q5VWK0 638 aa14.43□□□□□ -0.1
LIMK1-202ENST00000418310 NBPF4Q96M43 638 aa14.43□□□□□ -0.1
LIMK1-202ENST00000418310 MAP3K5Q99683 1374 aa14.43□□□□□ -0.1
LIMK1-202ENST00000418310 IBTKQ9P2D0 1353 aaPredicted RBP14.43□□□□□ -0.1
LIMK1-202ENST00000418310 PRAMEF22A3QJZ6 481 aa14.43□□□□□ -0.1
LIMK1-202ENST00000418310 TEFQ10587 303 aa14.43□□□□□ -0.1
LIMK1-202ENST00000418310 RHPN1Q8TCX5 695 aa14.43□□□□□ -0.1
LIMK1-202ENST00000418310 PLCB2Q00722 1185 aa14.43□□□□□ -0.1
LIMK1-202ENST00000418310 PLEKHG1Q9ULL1 1385 aa14.42□□□□□ -0.1
LIMK1-202ENST00000418310 SALL3Q9BXA9 1300 aa14.42□□□□□ -0.1
LIMK1-202ENST00000418310 ESCO1Q5FWF5 840 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms