RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 EID1Q9Y6B2 187 aa17.77■□□□□ 0.44
HDAC9-208ENST00000417496 CYP2E1P05181 493 aaPredicted RBP17.76■□□□□ 0.43
HDAC9-208ENST00000417496 ISY1Q9ULR0 285 aaKnown RBP17.76■□□□□ 0.43
HDAC9-208ENST00000417496 UBR1Q8IWV7 1749 aa17.76■□□□□ 0.43
HDAC9-208ENST00000417496 TRIM6-TRIM34B2RNG4 842 aa17.76■□□□□ 0.43
HDAC9-208ENST00000417496 CLCN1P35523 988 aa17.76■□□□□ 0.43
HDAC9-208ENST00000417496 NUCB2P80303 420 aa17.76■□□□□ 0.43
HDAC9-208ENST00000417496 LRRCC1Q9C099 1032 aa17.76■□□□□ 0.43
HDAC9-208ENST00000417496 OSBPL3Q9H4L5 887 aa17.76■□□□□ 0.43
HDAC9-208ENST00000417496 LRRFIP2Q9Y608 721 aaKnown RBP17.76■□□□□ 0.43
HDAC9-208ENST00000417496 KDRP35968 1356 aa17.76■□□□□ 0.43
HDAC9-208ENST00000417496 TTC21AQ8NDW8 1320 aa17.75■□□□□ 0.43
HDAC9-208ENST00000417496 RGPD1P0DJD0 1748 aa17.75■□□□□ 0.43
HDAC9-208ENST00000417496 GNAT3A8MTJ3 354 aa17.75■□□□□ 0.43
HDAC9-208ENST00000417496 PRPF40AO75400 957 aaKnown RBP17.75■□□□□ 0.43
HDAC9-208ENST00000417496 UNC5CLQ8IV45 518 aa17.75■□□□□ 0.43
HDAC9-208ENST00000417496 LMBRD1Q9NUN5 540 aa17.75■□□□□ 0.43
HDAC9-208ENST00000417496 PALD1Q9ULE6 856 aa17.75■□□□□ 0.43
HDAC9-208ENST00000417496 ESPNB1AK53 854 aa17.75■□□□□ 0.43
HDAC9-208ENST00000417496 CCDC30Q5VVM6 783 aa17.75■□□□□ 0.43
HDAC9-208ENST00000417496 MX1P20591 662 aa17.74■□□□□ 0.43
HDAC9-208ENST00000417496 PTMSP20962 102 aa17.74■□□□□ 0.43
HDAC9-208ENST00000417496 C14orf37Q86TY3 774 aa17.74■□□□□ 0.43
HDAC9-208ENST00000417496 TRIM44Q96DX7 344 aaPredicted RBP17.74■□□□□ 0.43
HDAC9-208ENST00000417496 PHAXQ9H814 394 aaKnown RBP17.74■□□□□ 0.43
HDAC9-208ENST00000417496 IL1RAPL2Q9NP60 686 aa17.74■□□□□ 0.43
HDAC9-208ENST00000417496 HOXC9P31274 260 aa17.73■□□□□ 0.43
HDAC9-208ENST00000417496 NAP1L5Q96NT1 182 aaPredicted RBP17.73■□□□□ 0.43
HDAC9-208ENST00000417496 NASPP49321 788 aaPredicted RBP17.73■□□□□ 0.43
HDAC9-208ENST00000417496 ATP8B2P98198 1209 aa17.73■□□□□ 0.43
HDAC9-208ENST00000417496 RBM33Q96EV2 1170 aaKnown RBP17.73■□□□□ 0.43
HDAC9-208ENST00000417496 ESYT1Q9BSJ8 1104 aa17.73■□□□□ 0.43
HDAC9-208ENST00000417496 USP44Q9H0E7 712 aa17.73■□□□□ 0.43
HDAC9-208ENST00000417496 ANO2Q9NQ90 1003 aa17.73■□□□□ 0.43
HDAC9-208ENST00000417496 RBM27Q9P2N5 1060 aaKnown RBP17.73■□□□□ 0.43
HDAC9-208ENST00000417496 SALL3Q9BXA9 1300 aa17.73■□□□□ 0.43
HDAC9-208ENST00000417496 TOPAZ1Q8N9V7 1692 aa17.72■□□□□ 0.43
HDAC9-208ENST00000417496 MAP4K4O95819 1239 aaPredicted RBP17.72■□□□□ 0.43
HDAC9-208ENST00000417496 ABTB2Q8N961 1025 aa17.72■□□□□ 0.43
HDAC9-208ENST00000417496 TMX3Q96JJ7 454 aa17.72■□□□□ 0.43
HDAC9-208ENST00000417496 IL25Q9H293 177 aa17.72■□□□□ 0.43
HDAC9-208ENST00000417496 PLEKHG5O94827 1062 aa17.71■□□□□ 0.43
HDAC9-208ENST00000417496 GNAI3P08754 354 aa17.71■□□□□ 0.43
HDAC9-208ENST00000417496 CWC22Q9HCG8 908 aaKnown RBP17.71■□□□□ 0.43
HDAC9-208ENST00000417496 EIF2S2P20042 333 aaKnown RBP17.71■□□□□ 0.43
HDAC9-208ENST00000417496 ZSCAN23Q3MJ62 389 aa17.71■□□□□ 0.43
HDAC9-208ENST00000417496 NUTM1Q86Y26 1132 aa17.71■□□□□ 0.43
HDAC9-208ENST00000417496 GPT2Q8TD30 523 aa17.71■□□□□ 0.43
HDAC9-208ENST00000417496 NALCNQ8IZF0 1738 aa17.71■□□□□ 0.42
HDAC9-208ENST00000417496 CHMLP26374 656 aa17.7■□□□□ 0.42
HDAC9-208ENST00000417496 UPF3BQ9BZI7 483 aaKnown RBP17.7■□□□□ 0.42
HDAC9-208ENST00000417496 NSFL1CQ9UNZ2 370 aaKnown RBP17.7■□□□□ 0.42
HDAC9-208ENST00000417496 KCNA6P17658 529 aa17.69■□□□□ 0.42
HDAC9-208ENST00000417496 TAF7Q15545 349 aaPredicted RBP17.69■□□□□ 0.42
HDAC9-208ENST00000417496 FOXD4L6Q3SYB3 417 aaPredicted RBP17.69■□□□□ 0.42
HDAC9-208ENST00000417496 FOXD4L3Q6VB84 417 aaPredicted RBP17.69■□□□□ 0.42
HDAC9-208ENST00000417496 IBTKQ9P2D0 1353 aaPredicted RBP17.69■□□□□ 0.42
HDAC9-208ENST00000417496 HDGFL1Q5TGJ6 251 aa17.69■□□□□ 0.42
HDAC9-208ENST00000417496 TBX22Q9Y458 520 aa17.69■□□□□ 0.42
HDAC9-208ENST00000417496 ZBTB7CA1YPR0 619 aa17.68■□□□□ 0.42
HDAC9-208ENST00000417496 UBTFL1P0CB47 393 aaPredicted RBP17.68■□□□□ 0.42
HDAC9-208ENST00000417496 PRIM1P49642 420 aaKnown RBP17.68■□□□□ 0.42
HDAC9-208ENST00000417496 RGPD8O14715 1765 aaPredicted RBP17.67■□□□□ 0.42
HDAC9-208ENST00000417496 ANXA1P04083 346 aa17.67■□□□□ 0.42
HDAC9-208ENST00000417496 HTATSF1O43719 755 aaKnown RBP17.67■□□□□ 0.42
HDAC9-208ENST00000417496 RBSNQ9H1K0 784 aa17.67■□□□□ 0.42
HDAC9-208ENST00000417496 LGR6Q9HBX8 967 aa17.67■□□□□ 0.42
HDAC9-208ENST00000417496 SURF6O75683 361 aaKnown RBP17.66■□□□□ 0.42
HDAC9-208ENST00000417496 PPP1R42Q7Z4L9 355 aa17.66■□□□□ 0.42
HDAC9-208ENST00000417496 MAP3K5Q99683 1374 aa17.66■□□□□ 0.42
HDAC9-208ENST00000417496 KCNQ3O43525 872 aa17.66■□□□□ 0.42
HDAC9-208ENST00000417496 NBPF7P0C2Y1 421 aaPredicted RBP17.66■□□□□ 0.42
HDAC9-208ENST00000417496 ZNF445P59923 1031 aa17.65■□□□□ 0.42
HDAC9-208ENST00000417496 TMEM63CQ9P1W3 806 aa17.65■□□□□ 0.42
HDAC9-208ENST00000417496 STAP2Q9UGK3 403 aa17.64■□□□□ 0.41
HDAC9-208ENST00000417496 PIK3C2AO00443 1686 aa17.64■□□□□ 0.41
HDAC9-208ENST00000417496 DIP2AQ14689 1571 aa17.64■□□□□ 0.41
HDAC9-208ENST00000417496 CCDC173Q0VFZ6 552 aa17.64■□□□□ 0.41
HDAC9-208ENST00000417496 LARP6Q9BRS8 491 aaKnown RBP17.64■□□□□ 0.41
HDAC9-208ENST00000417496 SYCE3A1L190 88 aa17.63■□□□□ 0.41
HDAC9-208ENST00000417496 SRGAP3O43295 1099 aa17.63■□□□□ 0.41
HDAC9-208ENST00000417496 NBPF6Q5VWK0 638 aa17.63■□□□□ 0.41
HDAC9-208ENST00000417496 NBPF4Q96M43 638 aa17.63■□□□□ 0.41
HDAC9-208ENST00000417496 PPP1R9BQ96SB3 815 aa17.63■□□□□ 0.41
HDAC9-208ENST00000417496 CHPF2Q9P2E5 772 aa17.63■□□□□ 0.41
HDAC9-208ENST00000417496 FMN2Q9NZ56 1722 aa17.63■□□□□ 0.41
HDAC9-208ENST00000417496 SOS1Q07889 1333 aaPredicted RBP17.62■□□□□ 0.41
HDAC9-208ENST00000417496 DTNBO60941 627 aa17.62■□□□□ 0.41
HDAC9-208ENST00000417496 MCCP23508 829 aa17.62■□□□□ 0.41
HDAC9-208ENST00000417496 SSH3Q8TE77 659 aa17.62■□□□□ 0.41
HDAC9-208ENST00000417496 ANP32BQ92688 251 aaKnown RBP17.62■□□□□ 0.41
HDAC9-208ENST00000417496 GDPD2Q9HCC8 539 aa17.62■□□□□ 0.41
HDAC9-208ENST00000417496 PI4KAP2A4QPH2 592 aa17.62■□□□□ 0.41
HDAC9-208ENST00000417496 PI4KAP1Q8N8J0 262 aa17.62■□□□□ 0.41
HDAC9-208ENST00000417496 SRCIN1Q9C0H9 1055 aa17.62■□□□□ 0.41
HDAC9-208ENST00000417496 KIF13AQ9H1H9 1805 aa17.61■□□□□ 0.41
HDAC9-208ENST00000417496 TPRNQ4KMQ1 711 aa17.61■□□□□ 0.41
HDAC9-208ENST00000417496 THEMISQ8N1K5 641 aaPredicted RBP17.61■□□□□ 0.41
HDAC9-208ENST00000417496 RHPN1Q8TCX5 695 aa17.61■□□□□ 0.41
HDAC9-208ENST00000417496 NWD1Q149M9 1564 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms