RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 FAM83GA6ND36 823 aa12.54□□□□□ -0.4
COL12A1-203ENST00000416123 DZIP1Q86YF9 867 aaKnown RBP12.54□□□□□ -0.4
COL12A1-203ENST00000416123 AEBP1Q8IUX7 1158 aa12.54□□□□□ -0.4
COL12A1-203ENST00000416123 RSPH6AQ9H0K4 717 aa12.54□□□□□ -0.4
COL12A1-203ENST00000416123 MKNK2Q9HBH9 465 aa12.54□□□□□ -0.4
COL12A1-203ENST00000416123 IFIT5Q13325 482 aaKnown RBP12.53□□□□□ -0.4
COL12A1-203ENST00000416123 CRACR2BQ8N4Y2 399 aaPredicted RBP12.53□□□□□ -0.4
COL12A1-203ENST00000416123 SETD1BQ9UPS6 1966 aaKnown RBP12.53□□□□□ -0.4
COL12A1-203ENST00000416123 ATP5J2-PTCD1G3V325 749 aa12.53□□□□□ -0.4
COL12A1-203ENST00000416123 MAP3K2Q9Y2U5 619 aa12.53□□□□□ -0.4
COL12A1-203ENST00000416123 IFIT1P09914 478 aaKnown RBP12.53□□□□□ -0.4
COL12A1-203ENST00000416123 CCDC173Q0VFZ6 552 aa12.53□□□□□ -0.4
COL12A1-203ENST00000416123 EXOC5O00471 708 aa12.53□□□□□ -0.4
COL12A1-203ENST00000416123 KIF1BPQ96EK5 621 aa12.53□□□□□ -0.4
COL12A1-203ENST00000416123 ACSBG1Q96GR2 724 aa12.53□□□□□ -0.4
COL12A1-203ENST00000416123 SEPT11Q9NVA2 429 aaKnown RBP12.53□□□□□ -0.4
COL12A1-203ENST00000416123 JMYQ8N9B5 988 aa12.53□□□□□ -0.4
COL12A1-203ENST00000416123 AMOTQ4VCS5 1084 aa12.53□□□□□ -0.4
COL12A1-203ENST00000416123 MYCNP04198 464 aaPredicted RBP12.52□□□□□ -0.4
COL12A1-203ENST00000416123 TEX35Q5T0J7 233 aa12.52□□□□□ -0.4
COL12A1-203ENST00000416123 PDCL3Q9H2J4 239 aa12.52□□□□□ -0.4
COL12A1-203ENST00000416123 GUCY1B3Q02153 619 aa12.52□□□□□ -0.4
COL12A1-203ENST00000416123 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.52□□□□□ -0.4
COL12A1-203ENST00000416123 SPATA32Q96LK8 384 aa12.52□□□□□ -0.4
COL12A1-203ENST00000416123 DENND4BO75064 1496 aaPredicted RBP12.52□□□□□ -0.4
COL12A1-203ENST00000416123 CTNNA3Q9UI47 895 aa12.52□□□□□ -0.4
COL12A1-203ENST00000416123 TTLL12Q14166 644 aaPredicted RBP12.52□□□□□ -0.41
COL12A1-203ENST00000416123 AKAP2Q9Y2D5 859 aa12.52□□□□□ -0.41
COL12A1-203ENST00000416123 NOL7Q9UMY1 257 aaKnown RBP12.52□□□□□ -0.41
COL12A1-203ENST00000416123 KRT85P78386 507 aa12.52□□□□□ -0.41
COL12A1-203ENST00000416123 PPP6R1Q9UPN7 881 aa12.52□□□□□ -0.41
COL12A1-203ENST00000416123 WDR33Q9C0J8 1336 aaKnown RBP12.52□□□□□ -0.41
COL12A1-203ENST00000416123 DEF6Q9H4E7 631 aa12.52□□□□□ -0.41
COL12A1-203ENST00000416123 TMOD2Q9NZR1 351 aa12.52□□□□□ -0.41
COL12A1-203ENST00000416123 NKTRP30414 1462 aaKnown RBP12.51□□□□□ -0.41
COL12A1-203ENST00000416123 MBD3O95983 291 aa12.51□□□□□ -0.41
COL12A1-203ENST00000416123 STIM1Q13586 685 aa12.51□□□□□ -0.41
COL12A1-203ENST00000416123 CCDC83Q8IWF9 413 aa12.51□□□□□ -0.41
COL12A1-203ENST00000416123 CDKL5O76039 1030 aa12.51□□□□□ -0.41
COL12A1-203ENST00000416123 CAMK4Q16566 473 aa12.51□□□□□ -0.41
COL12A1-203ENST00000416123 PRPF40BQ6NWY9 871 aaKnown RBP12.51□□□□□ -0.41
COL12A1-203ENST00000416123 MRE11P49959 708 aa12.51□□□□□ -0.41
COL12A1-203ENST00000416123 DHX8Q14562 1220 aaKnown RBP12.51□□□□□ -0.41
COL12A1-203ENST00000416123 A0A087WZG4 1122 aa12.5□□□□□ -0.41
COL12A1-203ENST00000416123 RANBP6O60518 1105 aaKnown RBP12.5□□□□□ -0.41
COL12A1-203ENST00000416123 MX1P20591 662 aa12.5□□□□□ -0.41
COL12A1-203ENST00000416123 PAXIP1Q6ZW49 1069 aaPredicted RBP12.5□□□□□ -0.41
COL12A1-203ENST00000416123 CCDC144CPQ8IYA2 1237 aa12.5□□□□□ -0.41
COL12A1-203ENST00000416123 NAPBQ9H115 298 aa12.5□□□□□ -0.41
COL12A1-203ENST00000416123 BACH2Q9BYV9 841 aa12.5□□□□□ -0.41
COL12A1-203ENST00000416123 ACEP12821 1306 aa12.5□□□□□ -0.41
COL12A1-203ENST00000416123 SEC63Q9UGP8 760 aaKnown RBP12.5□□□□□ -0.41
COL12A1-203ENST00000416123 TSPOAP1O95153 1857 aa12.5□□□□□ -0.41
COL12A1-203ENST00000416123 RARSP54136 660 aaKnown RBP12.5□□□□□ -0.41
COL12A1-203ENST00000416123 ANXA1P04083 346 aa12.5□□□□□ -0.41
COL12A1-203ENST00000416123 CCDC192P0DO97 292 aa12.5□□□□□ -0.41
COL12A1-203ENST00000416123 TSHZ3Q63HK5 1081 aa12.5□□□□□ -0.41
COL12A1-203ENST00000416123 ANKRD24Q8TF21 1146 aa12.5□□□□□ -0.41
COL12A1-203ENST00000416123 DISP3Q9P2K9 1392 aa12.49□□□□□ -0.41
COL12A1-203ENST00000416123 ARGLU1Q9NWB6 273 aaPredicted RBP12.49□□□□□ -0.41
COL12A1-203ENST00000416123 C6orf229H3BNL8 230 aa12.49□□□□□ -0.41
COL12A1-203ENST00000416123 PPFIBP1Q86W92 1011 aa12.49□□□□□ -0.41
COL12A1-203ENST00000416123 ZNHIT6Q9NWK9 470 aaKnown RBP12.49□□□□□ -0.41
COL12A1-203ENST00000416123 RAB11FIP3O75154 756 aa12.49□□□□□ -0.41
COL12A1-203ENST00000416123 SLC5A1P13866 664 aa12.49□□□□□ -0.41
COL12A1-203ENST00000416123 WDR78Q5VTH9 848 aa12.49□□□□□ -0.41
COL12A1-203ENST00000416123 PIP4K2AP48426 406 aaPredicted RBP12.49□□□□□ -0.41
COL12A1-203ENST00000416123 CEP57L1Q8IYX8 460 aa12.49□□□□□ -0.41
COL12A1-203ENST00000416123 HYPKQ9NX55 129 aa12.49□□□□□ -0.41
COL12A1-203ENST00000416123 WWC3Q9ULE0 1092 aa12.49□□□□□ -0.41
COL12A1-203ENST00000416123 KDM5BQ9UGL1 1544 aa12.49□□□□□ -0.41
COL12A1-203ENST00000416123 RPAP2Q8IXW5 612 aaPredicted RBP12.48□□□□□ -0.41
COL12A1-203ENST00000416123 ANKRD18BA2A2Z9 1011 aa12.48□□□□□ -0.41
COL12A1-203ENST00000416123 CCDC96Q2M329 555 aa12.48□□□□□ -0.41
COL12A1-203ENST00000416123 DNAAF4Q8WXU2 420 aa12.48□□□□□ -0.41
COL12A1-203ENST00000416123 UPF3BQ9BZI7 483 aaKnown RBP12.48□□□□□ -0.41
COL12A1-203ENST00000416123 FERMT3Q86UX7 667 aa12.48□□□□□ -0.41
COL12A1-203ENST00000416123 U3KPZ7 1027 aaPredicted RBP12.48□□□□□ -0.41
COL12A1-203ENST00000416123 SYCP2Q9BX26 1530 aa12.48□□□□□ -0.41
COL12A1-203ENST00000416123 TRMT1LQ7Z2T5 733 aaKnown RBP12.48□□□□□ -0.41
COL12A1-203ENST00000416123 ZNF622Q969S3 477 aaKnown RBP eCLIP12.48□□□□□ -0.41
COL12A1-203ENST00000416123 LRPPRCP42704 1394 aaKnown RBP12.47□□□□□ -0.41
COL12A1-203ENST00000416123 KRT32Q14532 448 aa12.47□□□□□ -0.41
COL12A1-203ENST00000416123 RFC4P35249 363 aa12.47□□□□□ -0.41
COL12A1-203ENST00000416123 NOM1Q5C9Z4 860 aaKnown RBP12.47□□□□□ -0.41
COL12A1-203ENST00000416123 CCT2P78371 535 aaKnown RBP12.47□□□□□ -0.41
COL12A1-203ENST00000416123 CFAP45Q9UL16 551 aa12.47□□□□□ -0.41
COL12A1-203ENST00000416123 PPFIA3O75145 1194 aa12.47□□□□□ -0.41
COL12A1-203ENST00000416123 GLRX3O76003 335 aaKnown RBP12.47□□□□□ -0.41
COL12A1-203ENST00000416123 HSP90B2PQ58FF3 399 aa12.47□□□□□ -0.41
COL12A1-203ENST00000416123 SCAF11Q99590 1463 aaKnown RBP12.47□□□□□ -0.41
COL12A1-203ENST00000416123 ZNF444Q8N0Y2 327 aaPredicted RBP12.47□□□□□ -0.41
COL12A1-203ENST00000416123 NCOA1Q15788 1441 aa12.46□□□□□ -0.41
COL12A1-203ENST00000416123 MAP3K12Q12852 859 aa12.46□□□□□ -0.41
COL12A1-203ENST00000416123 C8orf37Q96NL8 207 aa12.46□□□□□ -0.41
COL12A1-203ENST00000416123 SNRKQ9NRH2 765 aa12.46□□□□□ -0.41
COL12A1-203ENST00000416123 DACH1Q9UI36 760 aa12.46□□□□□ -0.41
COL12A1-203ENST00000416123 CABLES1Q8TDN4 633 aa12.46□□□□□ -0.41
COL12A1-203ENST00000416123 PBRM1Q86U86 1689 aa12.46□□□□□ -0.42
COL12A1-203ENST00000416123 GOLIM4O00461 696 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms