RNA–Protein interactions for RNA: ENST00000413437.1

CSTF2-202, Transcript of cleavage stimulation factor subunit 2, humanhuman

TSL 5

Gene CSTF2, Length 757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-202ENST00000413437 THUMPD2Q9BTF0 503 aaKnown RBP10.26□□□□□ -0.77
CSTF2-202ENST00000413437 PDGFDQ9GZP0 370 aaPredicted RBP10.26□□□□□ -0.77
CSTF2-202ENST00000413437 MRS2Q9HD23 443 aa10.26□□□□□ -0.77
CSTF2-202ENST00000413437 DLG5Q8TDM6 1919 aa10.26□□□□□ -0.77
CSTF2-202ENST00000413437 LY75O60449 1722 aa10.26□□□□□ -0.77
CSTF2-202ENST00000413437 PALLDQ8WX93 1383 aa10.26□□□□□ -0.77
CSTF2-202ENST00000413437 RGPD3A6NKT7 1758 aaPredicted RBP10.25□□□□□ -0.77
CSTF2-202ENST00000413437 RGPD4Q7Z3J3 1758 aa10.25□□□□□ -0.77
CSTF2-202ENST00000413437 KCNQ3O43525 872 aa10.25□□□□□ -0.77
CSTF2-202ENST00000413437 ITPK1Q13572 414 aa10.25□□□□□ -0.77
CSTF2-202ENST00000413437 NFE2L2Q16236 605 aa10.25□□□□□ -0.77
CSTF2-202ENST00000413437 ZNF827Q17R98 1081 aa10.25□□□□□ -0.77
CSTF2-202ENST00000413437 SLC52A2Q9HAB3 445 aa10.25□□□□□ -0.77
CSTF2-202ENST00000413437 TMPOP42166 694 aaKnown RBP10.24□□□□□ -0.77
CSTF2-202ENST00000413437 NEUROD2Q15784 382 aa10.24□□□□□ -0.77
CSTF2-202ENST00000413437 MIS18AQ9NYP9 233 aa10.24□□□□□ -0.77
CSTF2-202ENST00000413437 CCNL1Q9UK58 526 aaPredicted RBP10.24□□□□□ -0.77
CSTF2-202ENST00000413437 PAPPAQ13219 1627 aa10.23□□□□□ -0.77
CSTF2-202ENST00000413437 PTCD1O75127 700 aaKnown RBP10.23□□□□□ -0.77
CSTF2-202ENST00000413437 DIEXFQ68CQ4 756 aaKnown RBP10.23□□□□□ -0.77
CSTF2-202ENST00000413437 AMIGO3Q86WK7 504 aa10.23□□□□□ -0.77
CSTF2-202ENST00000413437 MIER1Q8N108 512 aa10.23□□□□□ -0.77
CSTF2-202ENST00000413437 RUNDC1Q96C34 613 aa10.23□□□□□ -0.77
CSTF2-202ENST00000413437 RBM42Q9BTD8 480 aaKnown RBP10.23□□□□□ -0.77
CSTF2-202ENST00000413437 CEMIPQ8WUJ3 1361 aa10.23□□□□□ -0.77
CSTF2-202ENST00000413437 MRC1P22897 1456 aa10.23□□□□□ -0.77
CSTF2-202ENST00000413437 SIPA1L3O60292 1781 aaPredicted RBP10.22□□□□□ -0.77
CSTF2-202ENST00000413437 LOC102724428A0A0B4J2F2 783 aa10.22□□□□□ -0.77
CSTF2-202ENST00000413437 SIK1P57059 783 aa10.22□□□□□ -0.77
CSTF2-202ENST00000413437 RIPK4P57078 832 aa10.22□□□□□ -0.77
CSTF2-202ENST00000413437 LINC00116Q8NCU8 138 aa10.22□□□□□ -0.77
CSTF2-202ENST00000413437 SMARCC1Q92922 1105 aaPredicted RBP10.22□□□□□ -0.77
CSTF2-202ENST00000413437 AKT1S1Q96B36 256 aa10.22□□□□□ -0.77
CSTF2-202ENST00000413437 TRIM35Q9UPQ4 493 aa10.22□□□□□ -0.77
CSTF2-202ENST00000413437 MAPK8IP3Q9UPT6 1336 aa10.22□□□□□ -0.77
CSTF2-202ENST00000413437 APAF1O14727 1248 aa10.21□□□□□ -0.77
CSTF2-202ENST00000413437 ATP6V1AP38606 617 aa10.21□□□□□ -0.77
CSTF2-202ENST00000413437 TEFQ10587 303 aa10.21□□□□□ -0.77
CSTF2-202ENST00000413437 SLC15A2Q16348 729 aa10.21□□□□□ -0.77
CSTF2-202ENST00000413437 SLC27A3Q5K4L6 730 aa10.21□□□□□ -0.77
CSTF2-202ENST00000413437 FAM9BQ8IZU0 186 aa10.21□□□□□ -0.77
CSTF2-202ENST00000413437 TAF1LQ8IZX4 1826 aa10.21□□□□□ -0.78
CSTF2-202ENST00000413437 C5P01031 1676 aa10.2□□□□□ -0.78
CSTF2-202ENST00000413437 NEFMP07197 916 aa10.2□□□□□ -0.78
CSTF2-202ENST00000413437 NBPF14Q5TI25 921 aa10.2□□□□□ -0.78
CSTF2-202ENST00000413437 KCPQ6ZWJ8 1503 aa10.2□□□□□ -0.78
CSTF2-202ENST00000413437 RTF1Q92541 710 aaKnown RBP10.2□□□□□ -0.78
CSTF2-202ENST00000413437 PNNQ9H307 717 aaKnown RBP10.2□□□□□ -0.78
CSTF2-202ENST00000413437 STK32BQ9NY57 414 aa10.2□□□□□ -0.78
CSTF2-202ENST00000413437 TUBGCP6Q96RT7 1819 aa10.19□□□□□ -0.78
CSTF2-202ENST00000413437 TJP1Q07157 1748 aa10.19□□□□□ -0.78
CSTF2-202ENST00000413437 PRAMEF22A3QJZ6 481 aa10.19□□□□□ -0.78
CSTF2-202ENST00000413437 BTBD11A6QL63 1104 aa10.19□□□□□ -0.78
CSTF2-202ENST00000413437 HTATSF1O43719 755 aaKnown RBP10.19□□□□□ -0.78
CSTF2-202ENST00000413437 DNAJC10Q8IXB1 793 aa10.19□□□□□ -0.78
CSTF2-202ENST00000413437 ZNF496Q96IT1 587 aaPredicted RBP10.19□□□□□ -0.78
CSTF2-202ENST00000413437 PNPLA7Q6ZV29 1317 aa10.18□□□□□ -0.78
CSTF2-202ENST00000413437 TAF7Q15545 349 aaPredicted RBP10.18□□□□□ -0.78
CSTF2-202ENST00000413437 ZNF790Q6PG37 636 aa10.18□□□□□ -0.78
CSTF2-202ENST00000413437 PIAS4Q8N2W9 510 aaPredicted RBP10.18□□□□□ -0.78
CSTF2-202ENST00000413437 SALL2Q9Y467 1007 aaPredicted RBP10.18□□□□□ -0.78
CSTF2-202ENST00000413437 C4BP0C0L5 1744 aa10.18□□□□□ -0.78
CSTF2-202ENST00000413437 UBR2Q8IWV8 1755 aa10.17□□□□□ -0.78
CSTF2-202ENST00000413437 COL23A1Q86Y22 540 aaPredicted RBP10.17□□□□□ -0.78
CSTF2-202ENST00000413437 TFCP2L1Q9NZI6 479 aa10.17□□□□□ -0.78
CSTF2-202ENST00000413437 CASZ1Q86V15 1759 aa10.16□□□□□ -0.78
CSTF2-202ENST00000413437 COL5A3P25940 1745 aaPredicted RBP10.16□□□□□ -0.78
CSTF2-202ENST00000413437 MYH14Q7Z406 1995 aaKnown RBP10.16□□□□□ -0.78
CSTF2-202ENST00000413437 PHF14O94880 888 aa10.16□□□□□ -0.78
CSTF2-202ENST00000413437 ZBTB7AO95365 584 aa10.16□□□□□ -0.78
CSTF2-202ENST00000413437 INTS5Q6P9B9 1019 aaKnown RBP10.16□□□□□ -0.78
CSTF2-202ENST00000413437 CYP19A1P11511 503 aaPredicted RBP10.15□□□□□ -0.78
CSTF2-202ENST00000413437 CRKLP46109 303 aaKnown RBP10.15□□□□□ -0.78
CSTF2-202ENST00000413437 PIP4K2AP48426 406 aaPredicted RBP10.15□□□□□ -0.78
CSTF2-202ENST00000413437 KRT24Q2M2I5 525 aa10.15□□□□□ -0.78
CSTF2-202ENST00000413437 TTC5Q8N0Z6 440 aa10.15□□□□□ -0.78
CSTF2-202ENST00000413437 ATF5Q9Y2D1 282 aaPredicted RBP10.15□□□□□ -0.78
CSTF2-202ENST00000413437 LAS1LQ9Y4W2 734 aaKnown RBP10.15□□□□□ -0.78
CSTF2-202ENST00000413437 USP16Q9Y5T5 823 aa10.15□□□□□ -0.78
CSTF2-202ENST00000413437 ZNF831Q5JPB2 1677 aa10.15□□□□□ -0.79
CSTF2-202ENST00000413437 HEG1Q9ULI3 1381 aa10.14□□□□□ -0.79
CSTF2-202ENST00000413437 KDM3BQ7LBC6 1761 aa10.14□□□□□ -0.79
CSTF2-202ENST00000413437 CCER2I3L3R5 266 aa10.14□□□□□ -0.79
CSTF2-202ENST00000413437 GNPATO15228 680 aa10.14□□□□□ -0.79
CSTF2-202ENST00000413437 AK7Q96M32 723 aa10.14□□□□□ -0.79
CSTF2-202ENST00000413437 UBR3Q6ZT12 1888 aa10.14□□□□□ -0.79
CSTF2-202ENST00000413437 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.13□□□□□ -0.79
CSTF2-202ENST00000413437 MSH5O43196 834 aa10.13□□□□□ -0.79
CSTF2-202ENST00000413437 A1BGP04217 495 aa10.13□□□□□ -0.79
CSTF2-202ENST00000413437 EIF4A1P60842 406 aaKnown RBP10.13□□□□□ -0.79
CSTF2-202ENST00000413437 MSL1Q68DK7 614 aa10.13□□□□□ -0.79
CSTF2-202ENST00000413437 FMNL2Q96PY5 1086 aa10.13□□□□□ -0.79
CSTF2-202ENST00000413437 TSPYL4Q9UJ04 414 aa10.13□□□□□ -0.79
CSTF2-202ENST00000413437 ZBTB1Q9Y2K1 713 aa10.13□□□□□ -0.79
CSTF2-202ENST00000413437 QSER1Q2KHR3 1735 aa10.13□□□□□ -0.79
CSTF2-202ENST00000413437 CNTNAP4Q9C0A0 1308 aa10.12□□□□□ -0.79
CSTF2-202ENST00000413437 CICQ96RK0 1608 aaPredicted RBP10.12□□□□□ -0.79
CSTF2-202ENST00000413437 CHL1O00533 1208 aa10.12□□□□□ -0.79
CSTF2-202ENST00000413437 RPS6KA4O75676 772 aa10.12□□□□□ -0.79
CSTF2-202ENST00000413437 ZNF853P0CG23 659 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms