RNA–Protein interactions for RNA: ENST00000411409.1

RN7SKP3-201, Transcript of RNA, 7SK small nuclear pseudogene 3, humanhuman

BASIC

Gene RN7SKP3, Length 358 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP3-201ENST00000411409 CCDC184Q52MB2 194 aa12.46□□□□□ -0.41
RN7SKP3-201ENST00000411409 BABAM1Q9NWV8 329 aa12.46□□□□□ -0.41
RN7SKP3-201ENST00000411409 SHANK3Q9BYB0 1731 aa12.45□□□□□ -0.42
RN7SKP3-201ENST00000411409 TMPOP42166 694 aaKnown RBP12.45□□□□□ -0.42
RN7SKP3-201ENST00000411409 EN1Q05925 392 aaPredicted RBP12.45□□□□□ -0.42
RN7SKP3-201ENST00000411409 CEMIPQ8WUJ3 1361 aa12.44□□□□□ -0.42
RN7SKP3-201ENST00000411409 FAM182BQ5T319 152 aa12.44□□□□□ -0.42
RN7SKP3-201ENST00000411409 ADAMTS7Q9UKP4 1686 aa12.44□□□□□ -0.42
RN7SKP3-201ENST00000411409 RNMTO43148 476 aaKnown RBP12.43□□□□□ -0.42
RN7SKP3-201ENST00000411409 RIPK4P57078 832 aa12.43□□□□□ -0.42
RN7SKP3-201ENST00000411409 SMARCC1Q92922 1105 aaPredicted RBP12.43□□□□□ -0.42
RN7SKP3-201ENST00000411409 PLSCR1O15162 318 aa12.42□□□□□ -0.42
RN7SKP3-201ENST00000411409 FAM9BQ8IZU0 186 aa12.42□□□□□ -0.42
RN7SKP3-201ENST00000411409 SLC52A2Q9HAB3 445 aa12.42□□□□□ -0.42
RN7SKP3-201ENST00000411409 TMOD3Q9NYL9 352 aa12.42□□□□□ -0.42
RN7SKP3-201ENST00000411409 MRC1P22897 1456 aa12.41□□□□□ -0.42
RN7SKP3-201ENST00000411409 CABP4P57796 275 aa12.41□□□□□ -0.42
RN7SKP3-201ENST00000411409 TEFQ10587 303 aa12.41□□□□□ -0.42
RN7SKP3-201ENST00000411409 NHSQ6T4R5 1651 aa12.41□□□□□ -0.42
RN7SKP3-201ENST00000411409 KDM6AO15550 1401 aaPredicted RBP12.4□□□□□ -0.42
RN7SKP3-201ENST00000411409 APAF1O14727 1248 aa12.4□□□□□ -0.42
RN7SKP3-201ENST00000411409 TRIM37O94972 964 aa12.4□□□□□ -0.42
RN7SKP3-201ENST00000411409 PRIM1P49642 420 aaKnown RBP12.4□□□□□ -0.42
RN7SKP3-201ENST00000411409 R3HDM1Q15032 1099 aaKnown RBP12.4□□□□□ -0.42
RN7SKP3-201ENST00000411409 MPRIPQ6WCQ1 1025 aa12.4□□□□□ -0.42
RN7SKP3-201ENST00000411409 IL17REQ8NFR9 667 aa12.4□□□□□ -0.42
RN7SKP3-201ENST00000411409 IL16Q14005 1332 aa12.39□□□□□ -0.43
RN7SKP3-201ENST00000411409 SCN11AQ9UI33 1791 aa12.39□□□□□ -0.43
RN7SKP3-201ENST00000411409 TAF7Q15545 349 aaPredicted RBP12.39□□□□□ -0.43
RN7SKP3-201ENST00000411409 WDR63Q8IWG1 891 aa12.39□□□□□ -0.43
RN7SKP3-201ENST00000411409 CCDC146Q8IYE0 955 aa12.39□□□□□ -0.43
RN7SKP3-201ENST00000411409 SBF2Q86WG5 1849 aa12.39□□□□□ -0.43
RN7SKP3-201ENST00000411409 RGPD3A6NKT7 1758 aaPredicted RBP12.38□□□□□ -0.43
RN7SKP3-201ENST00000411409 RGPD4Q7Z3J3 1758 aa12.38□□□□□ -0.43
RN7SKP3-201ENST00000411409 LRP5O75197 1615 aa12.38□□□□□ -0.43
RN7SKP3-201ENST00000411409 APBA3O96018 575 aa12.38□□□□□ -0.43
RN7SKP3-201ENST00000411409 EZH2Q15910 746 aaKnown RBP12.38□□□□□ -0.43
RN7SKP3-201ENST00000411409 SLC27A3Q5K4L6 730 aa12.38□□□□□ -0.43
RN7SKP3-201ENST00000411409 CHMP4AQ9BY43 222 aa12.38□□□□□ -0.43
RN7SKP3-201ENST00000411409 VSIG10Q8N0Z9 540 aa12.37□□□□□ -0.43
RN7SKP3-201ENST00000411409 NFATC2IPQ8NCF5 419 aa12.37□□□□□ -0.43
RN7SKP3-201ENST00000411409 PIGBQ92521 554 aa12.37□□□□□ -0.43
RN7SKP3-201ENST00000411409 SYTL4Q96C24 671 aaPredicted RBP12.37□□□□□ -0.43
RN7SKP3-201ENST00000411409 LGR6Q9HBX8 967 aa12.37□□□□□ -0.43
RN7SKP3-201ENST00000411409 TRIM35Q9UPQ4 493 aa12.37□□□□□ -0.43
RN7SKP3-201ENST00000411409 CACNB1Q02641 598 aaPredicted RBP12.36□□□□□ -0.43
RN7SKP3-201ENST00000411409 NBPF14Q5TI25 921 aa12.36□□□□□ -0.43
RN7SKP3-201ENST00000411409 CFAP44Q96MT7 982 aa12.36□□□□□ -0.43
RN7SKP3-201ENST00000411409 IFT57Q9NWB7 429 aa12.36□□□□□ -0.43
RN7SKP3-201ENST00000411409 DOT1LQ8TEK3 1739 aa12.36□□□□□ -0.43
RN7SKP3-201ENST00000411409 SOS1Q07889 1333 aaPredicted RBP12.36□□□□□ -0.43
RN7SKP3-201ENST00000411409 KCNQ2O43526 872 aa12.35□□□□□ -0.43
RN7SKP3-201ENST00000411409 GNAI1P63096 354 aa12.35□□□□□ -0.43
RN7SKP3-201ENST00000411409 MCM10Q7L590 875 aa12.35□□□□□ -0.43
RN7SKP3-201ENST00000411409 WWC1Q8IX03 1113 aa12.35□□□□□ -0.43
RN7SKP3-201ENST00000411409 TTC5Q8N0Z6 440 aa12.35□□□□□ -0.43
RN7SKP3-201ENST00000411409 ACSBG1Q96GR2 724 aa12.35□□□□□ -0.43
RN7SKP3-201ENST00000411409 CAMKK2Q96RR4 588 aa12.35□□□□□ -0.43
RN7SKP3-201ENST00000411409 TEX13AQ9BXU3 409 aaPredicted RBP12.35□□□□□ -0.43
RN7SKP3-201ENST00000411409 ZNF831Q5JPB2 1677 aa12.35□□□□□ -0.43
RN7SKP3-201ENST00000411409 KAT6BQ8WYB5 2073 aa12.34□□□□□ -0.43
RN7SKP3-201ENST00000411409 BTBD11A6QL63 1104 aa12.34□□□□□ -0.43
RN7SKP3-201ENST00000411409 NEUROD2Q15784 382 aa12.34□□□□□ -0.43
RN7SKP3-201ENST00000411409 ZNF790Q6PG37 636 aa12.34□□□□□ -0.43
RN7SKP3-201ENST00000411409 DLG5Q8TDM6 1919 aa12.34□□□□□ -0.43
RN7SKP3-201ENST00000411409 ITGB4P16144 1822 aa12.34□□□□□ -0.43
RN7SKP3-201ENST00000411409 TOGARAM1Q9Y4F4 1720 aa12.34□□□□□ -0.43
RN7SKP3-201ENST00000411409 CHL1O00533 1208 aa12.33□□□□□ -0.44
RN7SKP3-201ENST00000411409 ZNF853P0CG23 659 aa12.33□□□□□ -0.44
RN7SKP3-201ENST00000411409 ATG3Q9NT62 314 aa12.33□□□□□ -0.44
RN7SKP3-201ENST00000411409 TNS1Q9HBL0 1735 aaKnown RBP12.33□□□□□ -0.44
RN7SKP3-201ENST00000411409 ZNF521Q96K83 1311 aa12.33□□□□□ -0.44
RN7SKP3-201ENST00000411409 PALLDQ8WX93 1383 aa12.32□□□□□ -0.44
RN7SKP3-201ENST00000411409 HOXB7P09629 217 aa12.32□□□□□ -0.44
RN7SKP3-201ENST00000411409 VASPP50552 380 aaPredicted RBP12.32□□□□□ -0.44
RN7SKP3-201ENST00000411409 FMNL2Q96PY5 1086 aa12.32□□□□□ -0.44
RN7SKP3-201ENST00000411409 RRP7AQ9Y3A4 280 aaKnown RBP12.32□□□□□ -0.44
RN7SKP3-201ENST00000411409 SIPA1L3O60292 1781 aaPredicted RBP12.32□□□□□ -0.44
RN7SKP3-201ENST00000411409 BTAF1O14981 1849 aa12.32□□□□□ -0.44
RN7SKP3-201ENST00000411409 SPDYE2BA6NHP3 402 aa12.31□□□□□ -0.44
RN7SKP3-201ENST00000411409 SPDYE6P0CI01 402 aa12.31□□□□□ -0.44
RN7SKP3-201ENST00000411409 SPDYE2Q495Y8 402 aa12.31□□□□□ -0.44
RN7SKP3-201ENST00000411409 MYH16Q9H6N6 1097 aa12.31□□□□□ -0.44
RN7SKP3-201ENST00000411409 VIRMAQ69YN4 1812 aaKnown RBP12.31□□□□□ -0.44
RN7SKP3-201ENST00000411409 PAPPAQ13219 1627 aa12.3□□□□□ -0.44
RN7SKP3-201ENST00000411409 CICQ96RK0 1608 aaPredicted RBP12.3□□□□□ -0.44
RN7SKP3-201ENST00000411409 LOC102724428A0A0B4J2F2 783 aa12.3□□□□□ -0.44
RN7SKP3-201ENST00000411409 E9PSI1 815 aa12.3□□□□□ -0.44
RN7SKP3-201ENST00000411409 SIK1P57059 783 aa12.3□□□□□ -0.44
RN7SKP3-201ENST00000411409 GOLGA2Q08379 1002 aa12.3□□□□□ -0.44
RN7SKP3-201ENST00000411409 DCTN1Q14203 1278 aa12.3□□□□□ -0.44
RN7SKP3-201ENST00000411409 TXNRD1Q16881 649 aa12.3□□□□□ -0.44
RN7SKP3-201ENST00000411409 TSPYL4Q9UJ04 414 aa12.3□□□□□ -0.44
RN7SKP3-201ENST00000411409 ASAP1Q9ULH1 1129 aa12.3□□□□□ -0.44
RN7SKP3-201ENST00000411409 HEG1Q9ULI3 1381 aa12.3□□□□□ -0.44
RN7SKP3-201ENST00000411409 LY75O60449 1722 aa12.29□□□□□ -0.44
RN7SKP3-201ENST00000411409 SNRPA1P09661 255 aaKnown RBP12.29□□□□□ -0.44
RN7SKP3-201ENST00000411409 RC3H1Q5TC82 1133 aaKnown RBP12.29□□□□□ -0.44
RN7SKP3-201ENST00000411409 PPP1R1BQ9UD71 204 aaPredicted RBP12.29□□□□□ -0.44
RN7SKP3-201ENST00000411409 ZBED9Q6R2W3 1325 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms