RNA–Protein interactions for RNA: ENST00000409938.5

EPHA4-203, Transcript of EPH receptor A4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene EPHA4, Length 3,363 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-203ENST00000409938 SOS1Q07889 1333 aaPredicted RBP9.62□□□□□ -0.87
EPHA4-203ENST00000409938 SLC4A2P04920 1241 aa9.62□□□□□ -0.87
EPHA4-203ENST00000409938 MTHFSDQ2M296 383 aaKnown RBP9.62□□□□□ -0.87
EPHA4-203ENST00000409938 DDX49Q9Y6V7 483 aaKnown RBP9.62□□□□□ -0.87
EPHA4-203ENST00000409938 FLT4P35916 1363 aa9.62□□□□□ -0.87
EPHA4-203ENST00000409938 HTATSF1O43719 755 aaKnown RBP9.62□□□□□ -0.87
EPHA4-203ENST00000409938 ST18O60284 1047 aa9.62□□□□□ -0.87
EPHA4-203ENST00000409938 CASC1Q6TDU7 716 aa9.62□□□□□ -0.87
EPHA4-203ENST00000409938 HDGFP51858 240 aaKnown RBP9.61□□□□□ -0.87
EPHA4-203ENST00000409938 EPB41L2O43491 1005 aaKnown RBP9.61□□□□□ -0.87
EPHA4-203ENST00000409938 HMMRO75330 724 aa9.61□□□□□ -0.87
EPHA4-203ENST00000409938 MCTP1Q6DN14 999 aa9.61□□□□□ -0.87
EPHA4-203ENST00000409938 AOX1Q06278 1338 aa9.61□□□□□ -0.87
EPHA4-203ENST00000409938 ANAPC15P60006 121 aa9.61□□□□□ -0.87
EPHA4-203ENST00000409938 ESYT1Q9BSJ8 1104 aa9.61□□□□□ -0.87
EPHA4-203ENST00000409938 FOXO3O43524 673 aa9.6□□□□□ -0.87
EPHA4-203ENST00000409938 RBSNQ9H1K0 784 aa9.6□□□□□ -0.87
EPHA4-203ENST00000409938 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.6□□□□□ -0.87
EPHA4-203ENST00000409938 PHRF1Q9P1Y6 1649 aaKnown RBP9.6□□□□□ -0.87
EPHA4-203ENST00000409938 BRD1O95696 1058 aa9.6□□□□□ -0.87
EPHA4-203ENST00000409938 ZSCAN30Q86W11 494 aa9.6□□□□□ -0.87
EPHA4-203ENST00000409938 INTS4Q96HW7 963 aaKnown RBP9.6□□□□□ -0.87
EPHA4-203ENST00000409938 PLEKHG5O94827 1062 aa9.59□□□□□ -0.87
EPHA4-203ENST00000409938 GNAI2P04899 355 aa9.59□□□□□ -0.87
EPHA4-203ENST00000409938 MCM2P49736 904 aa9.59□□□□□ -0.87
EPHA4-203ENST00000409938 ATP8B2P98198 1209 aa9.59□□□□□ -0.87
EPHA4-203ENST00000409938 BABAM1Q9NWV8 329 aa9.59□□□□□ -0.87
EPHA4-203ENST00000409938 TRIM44Q96DX7 344 aaPredicted RBP9.59□□□□□ -0.87
EPHA4-203ENST00000409938 TMX3Q96JJ7 454 aa9.59□□□□□ -0.87
EPHA4-203ENST00000409938 LMO7Q8WWI1 1683 aa9.58□□□□□ -0.88
EPHA4-203ENST00000409938 F6X3S4 739 aa9.58□□□□□ -0.88
EPHA4-203ENST00000409938 CHMLP26374 656 aa9.58□□□□□ -0.88
EPHA4-203ENST00000409938 TERF1P54274 439 aa9.58□□□□□ -0.88
EPHA4-203ENST00000409938 CAVIN1Q6NZI2 390 aaKnown RBP9.58□□□□□ -0.88
EPHA4-203ENST00000409938 TMEM63CQ9P1W3 806 aa9.58□□□□□ -0.88
EPHA4-203ENST00000409938 OFD1O75665 1012 aa9.58□□□□□ -0.88
EPHA4-203ENST00000409938 LTKP29376 864 aa9.58□□□□□ -0.88
EPHA4-203ENST00000409938 PRIM1P49642 420 aaKnown RBP9.58□□□□□ -0.88
EPHA4-203ENST00000409938 NAP1L5Q96NT1 182 aaPredicted RBP9.58□□□□□ -0.88
EPHA4-203ENST00000409938 EYA1Q99502 592 aa9.58□□□□□ -0.88
EPHA4-203ENST00000409938 MIS18AQ9NYP9 233 aa9.58□□□□□ -0.88
EPHA4-203ENST00000409938 TSPYL4Q9UJ04 414 aa9.58□□□□□ -0.88
EPHA4-203ENST00000409938 LTN1O94822 1766 aa9.58□□□□□ -0.88
EPHA4-203ENST00000409938 PNMA6EA0A0J9YXQ4 647 aa9.58□□□□□ -0.88
EPHA4-203ENST00000409938 ZNF500O60304 480 aaPredicted RBP9.58□□□□□ -0.88
EPHA4-203ENST00000409938 LRSAM1Q6UWE0 723 aa9.58□□□□□ -0.88
EPHA4-203ENST00000409938 PALD1Q9ULE6 856 aa9.58□□□□□ -0.88
EPHA4-203ENST00000409938 NOL7Q9UMY1 257 aaKnown RBP9.58□□□□□ -0.88
EPHA4-203ENST00000409938 NSFL1CQ9UNZ2 370 aaKnown RBP9.58□□□□□ -0.88
EPHA4-203ENST00000409938 ANKARQ7Z5J8 1434 aa9.58□□□□□ -0.88
EPHA4-203ENST00000409938 RRP9O43818 475 aaKnown RBP9.57□□□□□ -0.88
EPHA4-203ENST00000409938 MX1P20591 662 aa9.57□□□□□ -0.88
EPHA4-203ENST00000409938 LRRCC1Q9C099 1032 aa9.57□□□□□ -0.88
EPHA4-203ENST00000409938 TPM2P07951 284 aa9.57□□□□□ -0.88
EPHA4-203ENST00000409938 FLIIQ13045 1269 aa9.57□□□□□ -0.88
EPHA4-203ENST00000409938 CYB5RLQ6IPT4 315 aa9.57□□□□□ -0.88
EPHA4-203ENST00000409938 SRCIN1Q9C0H9 1055 aa9.57□□□□□ -0.88
EPHA4-203ENST00000409938 PRPF40AO75400 957 aaKnown RBP9.57□□□□□ -0.88
EPHA4-203ENST00000409938 GNAI3P08754 354 aa9.57□□□□□ -0.88
EPHA4-203ENST00000409938 CHD2O14647 1828 aaKnown RBP9.56□□□□□ -0.88
EPHA4-203ENST00000409938 POLA2Q14181 598 aa9.56□□□□□ -0.88
EPHA4-203ENST00000409938 EXOC6BQ9Y2D4 811 aa9.56□□□□□ -0.88
EPHA4-203ENST00000409938 CEMIPQ8WUJ3 1361 aa9.56□□□□□ -0.88
EPHA4-203ENST00000409938 SSH3Q8TE77 659 aa9.56□□□□□ -0.88
EPHA4-203ENST00000409938 RBM27Q9P2N5 1060 aaKnown RBP9.56□□□□□ -0.88
EPHA4-203ENST00000409938 USP44Q9H0E7 712 aa9.55□□□□□ -0.88
EPHA4-203ENST00000409938 IL25Q9H293 177 aa9.55□□□□□ -0.88
EPHA4-203ENST00000409938 MAP3K5Q99683 1374 aa9.55□□□□□ -0.88
EPHA4-203ENST00000409938 NFAT5O94916 1531 aa9.55□□□□□ -0.88
EPHA4-203ENST00000409938 APBB1O00213 710 aa9.55□□□□□ -0.88
EPHA4-203ENST00000409938 NEK4P51957 841 aa9.55□□□□□ -0.88
EPHA4-203ENST00000409938 CCDC30Q5VVM6 783 aa9.55□□□□□ -0.88
EPHA4-203ENST00000409938 UNC5CLQ8IV45 518 aa9.55□□□□□ -0.88
EPHA4-203ENST00000409938 TMEM87AQ8NBN3 555 aa9.55□□□□□ -0.88
EPHA4-203ENST00000409938 CHAMP1Q96JM3 812 aa9.55□□□□□ -0.88
EPHA4-203ENST00000409938 USP42Q9H9J4 1324 aaKnown RBP9.55□□□□□ -0.88
EPHA4-203ENST00000409938 RPAP1Q9BWH6 1393 aaPredicted RBP9.55□□□□□ -0.88
EPHA4-203ENST00000409938 SIPA1L3O60292 1781 aaPredicted RBP9.55□□□□□ -0.88
EPHA4-203ENST00000409938 MBD3O95983 291 aa9.55□□□□□ -0.88
EPHA4-203ENST00000409938 HSPA4P34932 840 aa9.55□□□□□ -0.88
EPHA4-203ENST00000409938 MLECQ14165 292 aa9.55□□□□□ -0.88
EPHA4-203ENST00000409938 TSHZ3Q63HK5 1081 aa9.55□□□□□ -0.88
EPHA4-203ENST00000409938 TCHHQ07283 1943 aa9.54□□□□□ -0.88
EPHA4-203ENST00000409938 IL17REQ8NFR9 667 aa9.54□□□□□ -0.88
EPHA4-203ENST00000409938 PI4K2BQ8TCG2 481 aa9.54□□□□□ -0.88
EPHA4-203ENST00000409938 RTF1Q92541 710 aaKnown RBP9.54□□□□□ -0.88
EPHA4-203ENST00000409938 CAMTA1Q9Y6Y1 1673 aa9.54□□□□□ -0.88
EPHA4-203ENST00000409938 SLC4A10Q6U841 1118 aa9.54□□□□□ -0.88
EPHA4-203ENST00000409938 ADAMTS7Q9UKP4 1686 aa9.54□□□□□ -0.88
EPHA4-203ENST00000409938 GNAT3A8MTJ3 354 aa9.54□□□□□ -0.88
EPHA4-203ENST00000409938 MCM5P33992 734 aa9.54□□□□□ -0.88
EPHA4-203ENST00000409938 HOXC9P31274 260 aa9.53□□□□□ -0.88
EPHA4-203ENST00000409938 KLHL34Q8N239 644 aa9.53□□□□□ -0.88
EPHA4-203ENST00000409938 TTC14Q96N46 770 aa9.53□□□□□ -0.88
EPHA4-203ENST00000409938 STK31Q9BXU1 1019 aa9.53□□□□□ -0.88
EPHA4-203ENST00000409938 TBX22Q9Y458 520 aa9.53□□□□□ -0.88
EPHA4-203ENST00000409938 NCAPD2Q15021 1401 aa9.53□□□□□ -0.88
EPHA4-203ENST00000409938 LRRFIP2Q9Y608 721 aaKnown RBP9.53□□□□□ -0.88
EPHA4-203ENST00000409938 LMTK3Q96Q04 1460 aa9.53□□□□□ -0.88
EPHA4-203ENST00000409938 RGPD2P0DJD1 1756 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms