RNA–Protein interactions for RNA: ENST00000409532.5

ITGA6-203, Transcript of integrin subunit alpha 6, humanhuman

TSL 2 BASIC

Gene ITGA6, Length 3,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-203ENST00000409532 PEAK1Q9H792 1746 aa13.78□□□□□ -0.2
ITGA6-203ENST00000409532 TECPR2O15040 1411 aa13.78□□□□□ -0.2
ITGA6-203ENST00000409532 AKAP12Q02952 1782 aa13.78□□□□□ -0.2
ITGA6-203ENST00000409532 ESPNB1AK53 854 aa13.78□□□□□ -0.2
ITGA6-203ENST00000409532 NUCB2P80303 420 aa13.78□□□□□ -0.2
ITGA6-203ENST00000409532 LRRCC1Q9C099 1032 aa13.78□□□□□ -0.2
ITGA6-203ENST00000409532 NASPP49321 788 aaPredicted RBP13.77□□□□□ -0.2
ITGA6-203ENST00000409532 UPF3BQ9BZI7 483 aaKnown RBP13.77□□□□□ -0.2
ITGA6-203ENST00000409532 PALD1Q9ULE6 856 aa13.77□□□□□ -0.2
ITGA6-203ENST00000409532 PHAXQ9H814 394 aaKnown RBP13.77□□□□□ -0.21
ITGA6-203ENST00000409532 SETD1BQ9UPS6 1966 aaKnown RBP13.77□□□□□ -0.21
ITGA6-203ENST00000409532 KLHL40Q2TBA0 621 aa13.77□□□□□ -0.21
ITGA6-203ENST00000409532 NUTM1Q86Y26 1132 aa13.77□□□□□ -0.21
ITGA6-203ENST00000409532 UNC5CLQ8IV45 518 aa13.77□□□□□ -0.21
ITGA6-203ENST00000409532 FLT4P35916 1363 aa13.76□□□□□ -0.21
ITGA6-203ENST00000409532 PTPRUQ92729 1446 aa13.76□□□□□ -0.21
ITGA6-203ENST00000409532 GNAT3A8MTJ3 354 aa13.76□□□□□ -0.21
ITGA6-203ENST00000409532 MX1P20591 662 aa13.76□□□□□ -0.21
ITGA6-203ENST00000409532 CCDC30Q5VVM6 783 aa13.76□□□□□ -0.21
ITGA6-203ENST00000409532 ABTB2Q8N961 1025 aa13.76□□□□□ -0.21
ITGA6-203ENST00000409532 CLCN1P35523 988 aa13.76□□□□□ -0.21
ITGA6-203ENST00000409532 IL17REQ8NFR9 667 aa13.76□□□□□ -0.21
ITGA6-203ENST00000409532 ANXA1P04083 346 aa13.76□□□□□ -0.21
ITGA6-203ENST00000409532 LMBRD1Q9NUN5 540 aa13.76□□□□□ -0.21
ITGA6-203ENST00000409532 ZDHHC9Q9Y397 364 aa13.76□□□□□ -0.21
ITGA6-203ENST00000409532 CEP170BQ9Y4F5 1589 aaPredicted RBP13.75□□□□□ -0.21
ITGA6-203ENST00000409532 DTNBO60941 627 aa13.75□□□□□ -0.21
ITGA6-203ENST00000409532 PTMSP20962 102 aa13.74□□□□□ -0.21
ITGA6-203ENST00000409532 TMX3Q96JJ7 454 aa13.74□□□□□ -0.21
ITGA6-203ENST00000409532 SBNO1A3KN83 1393 aa13.74□□□□□ -0.21
ITGA6-203ENST00000409532 HDGFL1Q5TGJ6 251 aa13.74□□□□□ -0.21
ITGA6-203ENST00000409532 LARP6Q9BRS8 491 aaKnown RBP13.74□□□□□ -0.21
ITGA6-203ENST00000409532 ARHGEF10O15013 1369 aa13.74□□□□□ -0.21
ITGA6-203ENST00000409532 USP31Q70CQ4 1352 aa13.74□□□□□ -0.21
ITGA6-203ENST00000409532 GNAI3P08754 354 aa13.74□□□□□ -0.21
ITGA6-203ENST00000409532 ANP32BQ92688 251 aaKnown RBP13.74□□□□□ -0.21
ITGA6-203ENST00000409532 ESYT1Q9BSJ8 1104 aa13.74□□□□□ -0.21
ITGA6-203ENST00000409532 IGSF1Q8N6C5 1336 aa13.73□□□□□ -0.21
ITGA6-203ENST00000409532 UBTFL1P0CB47 393 aaPredicted RBP13.73□□□□□ -0.21
ITGA6-203ENST00000409532 ZSCAN23Q3MJ62 389 aa13.73□□□□□ -0.21
ITGA6-203ENST00000409532 ISY1Q9ULR0 285 aaKnown RBP13.73□□□□□ -0.21
ITGA6-203ENST00000409532 NSFL1CQ9UNZ2 370 aaKnown RBP13.73□□□□□ -0.21
ITGA6-203ENST00000409532 REREQ9P2R6 1566 aa13.73□□□□□ -0.21
ITGA6-203ENST00000409532 SURF6O75683 361 aaKnown RBP13.73□□□□□ -0.21
ITGA6-203ENST00000409532 HOXC9P31274 260 aa13.73□□□□□ -0.21
ITGA6-203ENST00000409532 ATP8B2P98198 1209 aa13.73□□□□□ -0.21
ITGA6-203ENST00000409532 NRKQ7Z2Y5 1582 aa13.73□□□□□ -0.21
ITGA6-203ENST00000409532 USP44Q9H0E7 712 aa13.73□□□□□ -0.21
ITGA6-203ENST00000409532 IL25Q9H293 177 aa13.73□□□□□ -0.21
ITGA6-203ENST00000409532 CYP2E1P05181 493 aaPredicted RBP13.72□□□□□ -0.21
ITGA6-203ENST00000409532 TTC21AQ8NDW8 1320 aa13.72□□□□□ -0.21
ITGA6-203ENST00000409532 CHMLP26374 656 aa13.72□□□□□ -0.21
ITGA6-203ENST00000409532 PRIM1P49642 420 aaKnown RBP13.72□□□□□ -0.21
ITGA6-203ENST00000409532 GPT2Q8TD30 523 aa13.72□□□□□ -0.21
ITGA6-203ENST00000409532 CWC22Q9HCG8 908 aaKnown RBP13.72□□□□□ -0.21
ITGA6-203ENST00000409532 TAF7Q15545 349 aaPredicted RBP13.72□□□□□ -0.21
ITGA6-203ENST00000409532 OSBPL3Q9H4L5 887 aa13.72□□□□□ -0.21
ITGA6-203ENST00000409532 GDPD2Q9HCC8 539 aa13.72□□□□□ -0.21
ITGA6-203ENST00000409532 KCNA6P17658 529 aa13.71□□□□□ -0.21
ITGA6-203ENST00000409532 RBSNQ9H1K0 784 aa13.71□□□□□ -0.21
ITGA6-203ENST00000409532 RGPD8O14715 1765 aaPredicted RBP13.71□□□□□ -0.22
ITGA6-203ENST00000409532 PLEKHG1Q9ULL1 1385 aa13.71□□□□□ -0.22
ITGA6-203ENST00000409532 KCNQ3O43525 872 aa13.7□□□□□ -0.22
ITGA6-203ENST00000409532 CLEC17AQ6ZS10 378 aa13.7□□□□□ -0.22
ITGA6-203ENST00000409532 PPP1R42Q7Z4L9 355 aa13.7□□□□□ -0.22
ITGA6-203ENST00000409532 RNF214Q8ND24 703 aa13.7□□□□□ -0.22
ITGA6-203ENST00000409532 LGR6Q9HBX8 967 aa13.7□□□□□ -0.22
ITGA6-203ENST00000409532 SYCE3A1L190 88 aa13.7□□□□□ -0.22
ITGA6-203ENST00000409532 MCCP23508 829 aa13.7□□□□□ -0.22
ITGA6-203ENST00000409532 UBR1Q8IWV7 1749 aa13.7□□□□□ -0.22
ITGA6-203ENST00000409532 SRGAP3O43295 1099 aa13.69□□□□□ -0.22
ITGA6-203ENST00000409532 NBPF7P0C2Y1 421 aaPredicted RBP13.69□□□□□ -0.22
ITGA6-203ENST00000409532 PRKCSHP14314 528 aaPredicted RBP13.69□□□□□ -0.22
ITGA6-203ENST00000409532 KDRP35968 1356 aa13.69□□□□□ -0.22
ITGA6-203ENST00000409532 TMEM63CQ9P1W3 806 aa13.69□□□□□ -0.22
ITGA6-203ENST00000409532 SSH2Q76I76 1423 aa13.69□□□□□ -0.22
ITGA6-203ENST00000409532 LMOD2Q6P5Q4 547 aa13.68□□□□□ -0.22
ITGA6-203ENST00000409532 SALL3Q9BXA9 1300 aa13.68□□□□□ -0.22
ITGA6-203ENST00000409532 IBTKQ9P2D0 1353 aaPredicted RBP13.68□□□□□ -0.22
ITGA6-203ENST00000409532 CCDC173Q0VFZ6 552 aa13.68□□□□□ -0.22
ITGA6-203ENST00000409532 CHPF2Q9P2E5 772 aa13.68□□□□□ -0.22
ITGA6-203ENST00000409532 PI4KAP2A4QPH2 592 aa13.68□□□□□ -0.22
ITGA6-203ENST00000409532 OS9Q13438 667 aaPredicted RBP13.68□□□□□ -0.22
ITGA6-203ENST00000409532 PI4KAP1Q8N8J0 262 aa13.68□□□□□ -0.22
ITGA6-203ENST00000409532 MAP3K5Q99683 1374 aa13.67□□□□□ -0.22
ITGA6-203ENST00000409532 XPCQ01831 940 aaPredicted RBP13.67□□□□□ -0.22
ITGA6-203ENST00000409532 LRRC59Q96AG4 307 aaKnown RBP13.67□□□□□ -0.22
ITGA6-203ENST00000409532 SRCIN1Q9C0H9 1055 aa13.67□□□□□ -0.22
ITGA6-203ENST00000409532 RGPD1P0DJD0 1748 aa13.67□□□□□ -0.22
ITGA6-203ENST00000409532 MPRIPQ6WCQ1 1025 aa13.67□□□□□ -0.22
ITGA6-203ENST00000409532 DDX54Q8TDD1 881 aaKnown RBP13.67□□□□□ -0.22
ITGA6-203ENST00000409532 TBX22Q9Y458 520 aa13.67□□□□□ -0.22
ITGA6-203ENST00000409532 CPA1P15085 419 aa13.66□□□□□ -0.22
ITGA6-203ENST00000409532 NBPF6Q5VWK0 638 aa13.66□□□□□ -0.22
ITGA6-203ENST00000409532 CWC27Q6UX04 472 aaKnown RBP13.66□□□□□ -0.22
ITGA6-203ENST00000409532 NBPF4Q96M43 638 aa13.66□□□□□ -0.22
ITGA6-203ENST00000409532 SPG7Q9UQ90 795 aa13.66□□□□□ -0.22
ITGA6-203ENST00000409532 ZNF445P59923 1031 aa13.66□□□□□ -0.22
ITGA6-203ENST00000409532 RHPN1Q8TCX5 695 aa13.66□□□□□ -0.22
ITGA6-203ENST00000409532 MPNDQ8N594 471 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms