RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 LRRC7Q96NW7 1537 aa18.94■□□□□ 0.62
LIMS2-205ENST00000409455 DYNC1I1O14576 645 aa18.93■□□□□ 0.62
LIMS2-205ENST00000409455 AMPHP49418 695 aa18.92■□□□□ 0.62
LIMS2-205ENST00000409455 CCDC39Q9UFE4 941 aa18.92■□□□□ 0.62
LIMS2-205ENST00000409455 PRPF40AO75400 957 aaKnown RBP18.91■□□□□ 0.62
LIMS2-205ENST00000409455 SULT6B1Q6IMI4 303 aa18.91■□□□□ 0.62
LIMS2-205ENST00000409455 AEBP1Q8IUX7 1158 aa18.91■□□□□ 0.62
LIMS2-205ENST00000409455 ARHGAP45Q92619 1136 aa18.91■□□□□ 0.62
LIMS2-205ENST00000409455 PRDM4Q9UKN5 801 aa18.91■□□□□ 0.62
LIMS2-205ENST00000409455 ATF3P18847 181 aa18.91■□□□□ 0.62
LIMS2-205ENST00000409455 PEAK1Q9H792 1746 aa18.9■□□□□ 0.62
LIMS2-205ENST00000409455 PKP1Q13835 747 aa18.9■□□□□ 0.62
LIMS2-205ENST00000409455 SBNO1A3KN83 1393 aa18.9■□□□□ 0.62
LIMS2-205ENST00000409455 GSPT1P15170 499 aaKnown RBP18.9■□□□□ 0.62
LIMS2-205ENST00000409455 NFE2L2Q16236 605 aa18.9■□□□□ 0.62
LIMS2-205ENST00000409455 ST18O60284 1047 aa18.89■□□□□ 0.61
LIMS2-205ENST00000409455 SASS6Q6UVJ0 657 aa18.89■□□□□ 0.61
LIMS2-205ENST00000409455 LRSAM1Q6UWE0 723 aa18.89■□□□□ 0.61
LIMS2-205ENST00000409455 GPT2Q8TD30 523 aa18.89■□□□□ 0.61
LIMS2-205ENST00000409455 STRCP1A6NGW2 1772 aa18.89■□□□□ 0.61
LIMS2-205ENST00000409455 FLT4P35916 1363 aa18.89■□□□□ 0.61
LIMS2-205ENST00000409455 C1orf167Q5SNV9 1468 aa18.89■□□□□ 0.61
LIMS2-205ENST00000409455 SIRT2Q8IXJ6 389 aa18.89■□□□□ 0.61
LIMS2-205ENST00000409455 RBM27Q9P2N5 1060 aaKnown RBP18.88■□□□□ 0.61
LIMS2-205ENST00000409455 INTS3Q68E01 1043 aaKnown RBP18.88■□□□□ 0.61
LIMS2-205ENST00000409455 SMAP1Q8IYB5 467 aaPredicted RBP18.87■□□□□ 0.61
LIMS2-205ENST00000409455 USP26Q9BXU7 913 aa18.87■□□□□ 0.61
LIMS2-205ENST00000409455 MRPL50Q8N5N7 158 aaKnown RBP18.87■□□□□ 0.61
LIMS2-205ENST00000409455 SYCE3A1L190 88 aa18.86■□□□□ 0.61
LIMS2-205ENST00000409455 HOXC9P31274 260 aa18.86■□□□□ 0.61
LIMS2-205ENST00000409455 KRT28Q7Z3Y7 464 aa18.86■□□□□ 0.61
LIMS2-205ENST00000409455 PLEKHM2Q8IWE5 1019 aa18.86■□□□□ 0.61
LIMS2-205ENST00000409455 TTC22Q5TAA0 569 aa18.85■□□□□ 0.61
LIMS2-205ENST00000409455 CASC1Q6TDU7 716 aa18.85■□□□□ 0.61
LIMS2-205ENST00000409455 ABCC4O15439 1325 aa18.85■□□□□ 0.61
LIMS2-205ENST00000409455 LMOD2Q6P5Q4 547 aa18.85■□□□□ 0.61
LIMS2-205ENST00000409455 THUMPD2Q9BTF0 503 aaKnown RBP18.85■□□□□ 0.61
LIMS2-205ENST00000409455 PLEKHG5O94827 1062 aa18.84■□□□□ 0.61
LIMS2-205ENST00000409455 TMEM63CQ9P1W3 806 aa18.84■□□□□ 0.61
LIMS2-205ENST00000409455 MARF1Q9Y4F3 1742 aaKnown RBP18.84■□□□□ 0.61
LIMS2-205ENST00000409455 ZGPATQ8N5A5 531 aaKnown RBP18.84■□□□□ 0.61
LIMS2-205ENST00000409455 STRCQ7RTU9 1775 aa18.84■□□□□ 0.61
LIMS2-205ENST00000409455 MST1RQ04912 1400 aa18.84■□□□□ 0.61
LIMS2-205ENST00000409455 VAMP4O75379 141 aa18.83■□□□□ 0.61
LIMS2-205ENST00000409455 MBD3O95983 291 aa18.83■□□□□ 0.61
LIMS2-205ENST00000409455 CADPS2Q86UW7 1296 aa18.83■□□□□ 0.61
LIMS2-205ENST00000409455 EYA1Q99502 592 aa18.83■□□□□ 0.61
LIMS2-205ENST00000409455 PTMAP06454 111 aaKnown RBP18.82■□□□□ 0.6
LIMS2-205ENST00000409455 DDX17Q92841 729 aaKnown RBP18.82■□□□□ 0.6
LIMS2-205ENST00000409455 ARID3AQ99856 593 aa18.82■□□□□ 0.6
LIMS2-205ENST00000409455 ZNF335Q9H4Z2 1342 aaPredicted RBP18.82■□□□□ 0.6
LIMS2-205ENST00000409455 FAM83GA6ND36 823 aa18.81■□□□□ 0.6
LIMS2-205ENST00000409455 KIAA2012Q0VF49 1180 aa18.81■□□□□ 0.6
LIMS2-205ENST00000409455 KCNH5Q8NCM2 988 aa18.81■□□□□ 0.6
LIMS2-205ENST00000409455 ZDHHC9Q9Y397 364 aa18.81■□□□□ 0.6
LIMS2-205ENST00000409455 KIF24Q5T7B8 1368 aa18.81■□□□□ 0.6
LIMS2-205ENST00000409455 DCCP43146 1447 aa18.81■□□□□ 0.6
LIMS2-205ENST00000409455 LTV1Q96GA3 475 aaPredicted RBP18.81■□□□□ 0.6
LIMS2-205ENST00000409455 USP54Q70EL1 1684 aa18.8■□□□□ 0.6
LIMS2-205ENST00000409455 ARHGEF10O15013 1369 aa18.8■□□□□ 0.6
LIMS2-205ENST00000409455 REC8O95072 547 aa18.8■□□□□ 0.6
LIMS2-205ENST00000409455 GCP02774 474 aa18.8■□□□□ 0.6
LIMS2-205ENST00000409455 MSH6P52701 1360 aa18.8■□□□□ 0.6
LIMS2-205ENST00000409455 RNF214Q8ND24 703 aa18.8■□□□□ 0.6
LIMS2-205ENST00000409455 API5Q9BZZ5 524 aaKnown RBP18.8■□□□□ 0.6
LIMS2-205ENST00000409455 IGSF1Q8N6C5 1336 aa18.79■□□□□ 0.6
LIMS2-205ENST00000409455 DCTN1Q14203 1278 aa18.79■□□□□ 0.6
LIMS2-205ENST00000409455 DCTPP1Q9H773 170 aa18.79■□□□□ 0.6
LIMS2-205ENST00000409455 ZBTB7CA1YPR0 619 aa18.79■□□□□ 0.6
LIMS2-205ENST00000409455 IP6K1Q92551 441 aa18.79■□□□□ 0.6
LIMS2-205ENST00000409455 RGPD1P0DJD0 1748 aa18.78■□□□□ 0.6
LIMS2-205ENST00000409455 GNAI1P63096 354 aa18.78■□□□□ 0.6
LIMS2-205ENST00000409455 LMOD3Q0VAK6 560 aa18.78■□□□□ 0.6
LIMS2-205ENST00000409455 TSPYL6Q8N831 410 aa18.78■□□□□ 0.6
LIMS2-205ENST00000409455 CCDC94Q9BW85 323 aaPredicted RBP18.78■□□□□ 0.6
LIMS2-205ENST00000409455 DNTTIP2Q5QJE6 756 aaKnown RBP18.77■□□□□ 0.6
LIMS2-205ENST00000409455 SYAP1Q96A49 352 aaPredicted RBP18.77■□□□□ 0.6
LIMS2-205ENST00000409455 TSPY26PQ9H489 355 aa18.77■□□□□ 0.6
LIMS2-205ENST00000409455 NSFL1CQ9UNZ2 370 aaKnown RBP18.77■□□□□ 0.6
LIMS2-205ENST00000409455 KDRP35968 1356 aa18.77■□□□□ 0.6
LIMS2-205ENST00000409455 ELL2O00472 640 aaPredicted RBP18.77■□□□□ 0.6
LIMS2-205ENST00000409455 IFT57Q9NWB7 429 aa18.77■□□□□ 0.6
LIMS2-205ENST00000409455 SDSP20132 328 aa18.76■□□□□ 0.59
LIMS2-205ENST00000409455 NFAT5O94916 1531 aa18.76■□□□□ 0.59
LIMS2-205ENST00000409455 TWISTNBQ3B726 338 aaPredicted RBP18.76■□□□□ 0.59
LIMS2-205ENST00000409455 MYRIPQ8NFW9 859 aa18.76■□□□□ 0.59
LIMS2-205ENST00000409455 C16orf71Q8IYS4 520 aaPredicted RBP18.75■□□□□ 0.59
LIMS2-205ENST00000409455 MTHFSDQ2M296 383 aaKnown RBP18.75■□□□□ 0.59
LIMS2-205ENST00000409455 ARHGEF25Q86VW2 580 aa18.75■□□□□ 0.59
LIMS2-205ENST00000409455 CHAMP1Q96JM3 812 aa18.75■□□□□ 0.59
LIMS2-205ENST00000409455 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.75■□□□□ 0.59
LIMS2-205ENST00000409455 RTL1A6NKG5 1358 aa18.75■□□□□ 0.59
LIMS2-205ENST00000409455 KIF1AQ12756 1690 aa18.75■□□□□ 0.59
LIMS2-205ENST00000409455 PHF14O94880 888 aa18.74■□□□□ 0.59
LIMS2-205ENST00000409455 ZNF853P0CG23 659 aa18.74■□□□□ 0.59
LIMS2-205ENST00000409455 FOXD4L5Q5VV16 416 aaPredicted RBP18.74■□□□□ 0.59
LIMS2-205ENST00000409455 FOXD4L4Q8WXT5 416 aaPredicted RBP18.74■□□□□ 0.59
LIMS2-205ENST00000409455 PRIMPOLQ96LW4 560 aa18.74■□□□□ 0.59
LIMS2-205ENST00000409455 MBIPQ9NS73 344 aa18.74■□□□□ 0.59
LIMS2-205ENST00000409455 MCM10Q7L590 875 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms