RNA–Protein interactions for RNA: ENST00000409212.5

SH3BP4-203, Transcript of SH3 domain binding protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SH3BP4, Length 5,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP4-203ENST00000409212 ZNHIT6Q9NWK9 470 aaKnown RBP18.73■□□□□ 0.59
SH3BP4-203ENST00000409212 THOC2Q8NI27 1593 aaKnown RBP18.73■□□□□ 0.59
SH3BP4-203ENST00000409212 BRPF1P55201 1214 aaPredicted RBP18.73■□□□□ 0.59
SH3BP4-203ENST00000409212 TRIM27P14373 513 aa18.73■□□□□ 0.59
SH3BP4-203ENST00000409212 DISP3Q9P2K9 1392 aa18.72■□□□□ 0.59
SH3BP4-203ENST00000409212 F6X3S4 739 aa18.72■□□□□ 0.59
SH3BP4-203ENST00000409212 RBM5P52756 815 aaKnown RBP eCLIP18.72■□□□□ 0.59
SH3BP4-203ENST00000409212 FLIIQ13045 1269 aa18.72■□□□□ 0.59
SH3BP4-203ENST00000409212 ABCF2Q9UG63 623 aa18.72■□□□□ 0.59
SH3BP4-203ENST00000409212 SMARCA5O60264 1052 aaPredicted RBP18.72■□□□□ 0.59
SH3BP4-203ENST00000409212 HMGN5P82970 282 aaKnown RBP18.72■□□□□ 0.59
SH3BP4-203ENST00000409212 IFIT5Q13325 482 aaKnown RBP18.71■□□□□ 0.59
SH3BP4-203ENST00000409212 KRT28Q7Z3Y7 464 aa18.71■□□□□ 0.59
SH3BP4-203ENST00000409212 BOLA2Q9H3K6 86 aa18.71■□□□□ 0.59
SH3BP4-203ENST00000409212 LRRFIP2Q9Y608 721 aaKnown RBP18.71■□□□□ 0.59
SH3BP4-203ENST00000409212 MTERF4Q7Z6M4 381 aaKnown RBP18.71■□□□□ 0.59
SH3BP4-203ENST00000409212 ERCC4Q92889 916 aaPredicted RBP18.71■□□□□ 0.59
SH3BP4-203ENST00000409212 PLCH2O75038 1416 aa18.71■□□□□ 0.59
SH3BP4-203ENST00000409212 CAVIN4Q5BKX8 364 aa18.71■□□□□ 0.59
SH3BP4-203ENST00000409212 ZFYVE27Q5T4F4 411 aa18.71■□□□□ 0.59
SH3BP4-203ENST00000409212 NUP62CLQ9H1M0 184 aa18.7■□□□□ 0.58
SH3BP4-203ENST00000409212 ZNF287Q9HBT7 754 aa18.7■□□□□ 0.58
SH3BP4-203ENST00000409212 CEP57L1Q8IYX8 460 aa18.7■□□□□ 0.58
SH3BP4-203ENST00000409212 ACEP12821 1306 aa18.7■□□□□ 0.58
SH3BP4-203ENST00000409212 PPFIBP1Q86W92 1011 aa18.7■□□□□ 0.58
SH3BP4-203ENST00000409212 TTLL5Q6EMB2 1281 aa18.7■□□□□ 0.58
SH3BP4-203ENST00000409212 CNKSR2Q8WXI2 1034 aa18.7■□□□□ 0.58
SH3BP4-203ENST00000409212 PPP1R1BQ9UD71 204 aaPredicted RBP18.7■□□□□ 0.58
SH3BP4-203ENST00000409212 ZSCAN29Q8IWY8 852 aaPredicted RBP18.69■□□□□ 0.58
SH3BP4-203ENST00000409212 PRPF40BQ6NWY9 871 aaKnown RBP18.69■□□□□ 0.58
SH3BP4-203ENST00000409212 IFNL2Q8IZJ0 200 aa18.69■□□□□ 0.58
SH3BP4-203ENST00000409212 GRPEL1Q9HAV7 217 aa18.69■□□□□ 0.58
SH3BP4-203ENST00000409212 CBFA2T2O43439 604 aa18.69■□□□□ 0.58
SH3BP4-203ENST00000409212 ZPR1O75312 459 aa18.69■□□□□ 0.58
SH3BP4-203ENST00000409212 RDXP35241 583 aaKnown RBP18.69■□□□□ 0.58
SH3BP4-203ENST00000409212 LUC7LQ9NQ29 371 aaKnown RBP18.69■□□□□ 0.58
SH3BP4-203ENST00000409212 SH2B1Q9NRF2 756 aaPredicted RBP18.69■□□□□ 0.58
SH3BP4-203ENST00000409212 BMP2KQ9NSY1 1161 aaPredicted RBP18.69■□□□□ 0.58
SH3BP4-203ENST00000409212 TNRQ92752 1358 aa18.69■□□□□ 0.58
SH3BP4-203ENST00000409212 TEX13AQ9BXU3 409 aaPredicted RBP18.69■□□□□ 0.58
SH3BP4-203ENST00000409212 TMEM132AQ24JP5 1023 aa18.68■□□□□ 0.58
SH3BP4-203ENST00000409212 SPC24Q8NBT2 197 aa18.68■□□□□ 0.58
SH3BP4-203ENST00000409212 MYO6Q9UM54 1294 aa18.68■□□□□ 0.58
SH3BP4-203ENST00000409212 SYCP1Q15431 976 aa18.68■□□□□ 0.58
SH3BP4-203ENST00000409212 UPF3BQ9BZI7 483 aaKnown RBP18.68■□□□□ 0.58
SH3BP4-203ENST00000409212 A0A087WZG4 1122 aa18.68■□□□□ 0.58
SH3BP4-203ENST00000409212 HMGB1P09429 215 aaKnown RBP18.68■□□□□ 0.58
SH3BP4-203ENST00000409212 MAP7D2Q96T17 732 aa18.68■□□□□ 0.58
SH3BP4-203ENST00000409212 SPINK5Q9NQ38 1064 aaPredicted RBP18.68■□□□□ 0.58
SH3BP4-203ENST00000409212 HSP90AB2PQ58FF8 381 aa18.67■□□□□ 0.58
SH3BP4-203ENST00000409212 ATP10BO94823 1461 aa18.67■□□□□ 0.58
SH3BP4-203ENST00000409212 DCAF8L1A6NGE4 600 aa18.67■□□□□ 0.58
SH3BP4-203ENST00000409212 MAP3K12Q12852 859 aa18.67■□□□□ 0.58
SH3BP4-203ENST00000409212 TRMT112Q9UI30 125 aaKnown RBP18.67■□□□□ 0.58
SH3BP4-203ENST00000409212 CADPS2Q86UW7 1296 aa18.67■□□□□ 0.58
SH3BP4-203ENST00000409212 TMOD2Q9NZR1 351 aa18.67■□□□□ 0.58
SH3BP4-203ENST00000409212 CEP131Q9UPN4 1083 aa18.67■□□□□ 0.58
SH3BP4-203ENST00000409212 EXOC5O00471 708 aa18.66■□□□□ 0.58
SH3BP4-203ENST00000409212 WWC2Q6AWC2 1192 aa18.66■□□□□ 0.58
SH3BP4-203ENST00000409212 DDX11Q96FC9 970 aa18.66■□□□□ 0.58
SH3BP4-203ENST00000409212 TTC21AQ8NDW8 1320 aa18.66■□□□□ 0.58
SH3BP4-203ENST00000409212 CCDC196A0A1B0GTZ2 297 aa18.66■□□□□ 0.58
SH3BP4-203ENST00000409212 NUP160Q12769 1436 aa18.66■□□□□ 0.58
SH3BP4-203ENST00000409212 RAPGEF6Q8TEU7 1601 aa18.66■□□□□ 0.58
SH3BP4-203ENST00000409212 NAPBQ9H115 298 aa18.66■□□□□ 0.58
SH3BP4-203ENST00000409212 MBIPQ9NS73 344 aa18.66■□□□□ 0.58
SH3BP4-203ENST00000409212 DUOX2Q9NRD8 1548 aa18.66■□□□□ 0.58
SH3BP4-203ENST00000409212 CCDC8Q9H0W5 538 aaPredicted RBP18.66■□□□□ 0.58
SH3BP4-203ENST00000409212 ZHX3Q9H4I2 956 aa18.66■□□□□ 0.58
SH3BP4-203ENST00000409212 CCDC83Q8IWF9 413 aa18.65■□□□□ 0.58
SH3BP4-203ENST00000409212 TXLNBQ8N3L3 684 aa18.65■□□□□ 0.58
SH3BP4-203ENST00000409212 RALGAPBQ86X10 1494 aa18.65■□□□□ 0.58
SH3BP4-203ENST00000409212 ANKRD18BA2A2Z9 1011 aa18.65■□□□□ 0.58
SH3BP4-203ENST00000409212 PIK3R4Q99570 1358 aa18.65■□□□□ 0.58
SH3BP4-203ENST00000409212 SLC5A1P13866 664 aa18.65■□□□□ 0.58
SH3BP4-203ENST00000409212 ECHDC1Q9NTX5 307 aa18.65■□□□□ 0.58
SH3BP4-203ENST00000409212 UGGT2Q9NYU1 1516 aa18.65■□□□□ 0.58
SH3BP4-203ENST00000409212 PLEKHH1Q9ULM0 1364 aa18.64■□□□□ 0.58
SH3BP4-203ENST00000409212 ARHGAP45Q92619 1136 aa18.64■□□□□ 0.57
SH3BP4-203ENST00000409212 SCAND2PQ9GZW5 306 aaPredicted RBP18.64■□□□□ 0.57
SH3BP4-203ENST00000409212 SMTNL1A8MU46 457 aa18.63■□□□□ 0.57
SH3BP4-203ENST00000409212 MAP3K11Q16584 847 aa18.63■□□□□ 0.57
SH3BP4-203ENST00000409212 BMP2KLQ5H9B9 411 aa18.63■□□□□ 0.57
SH3BP4-203ENST00000409212 EVI5LQ96CN4 794 aa18.63■□□□□ 0.57
SH3BP4-203ENST00000409212 USP5P45974 858 aa18.63■□□□□ 0.57
SH3BP4-203ENST00000409212 MAP3K2Q9Y2U5 619 aa18.62■□□□□ 0.57
SH3BP4-203ENST00000409212 A2MP01023 1474 aa18.62■□□□□ 0.57
SH3BP4-203ENST00000409212 ADAMTS2O95450 1211 aa18.62■□□□□ 0.57
SH3BP4-203ENST00000409212 ANKRD24Q8TF21 1146 aa18.62■□□□□ 0.57
SH3BP4-203ENST00000409212 DMRT2Q9Y5R5 561 aa18.62■□□□□ 0.57
SH3BP4-203ENST00000409212 MINDY4BA8MYZ0 360 aa18.62■□□□□ 0.57
SH3BP4-203ENST00000409212 FERMT3Q86UX7 667 aa18.62■□□□□ 0.57
SH3BP4-203ENST00000409212 DEF6Q9H4E7 631 aa18.62■□□□□ 0.57
SH3BP4-203ENST00000409212 BRPF3Q9ULD4 1205 aa18.62■□□□□ 0.57
SH3BP4-203ENST00000409212 UHRF1BP1LA0JNW5 1464 aa18.61■□□□□ 0.57
SH3BP4-203ENST00000409212 TANGO6Q9C0B7 1094 aa18.61■□□□□ 0.57
SH3BP4-203ENST00000409212 LIMCH1Q9UPQ0 1083 aa18.61■□□□□ 0.57
SH3BP4-203ENST00000409212 RNF41Q9H4P4 317 aaPredicted RBP18.61■□□□□ 0.57
SH3BP4-203ENST00000409212 SSBP05455 408 aaKnown RBP eCLIP18.61■□□□□ 0.57
SH3BP4-203ENST00000409212 POLR3DP05423 398 aaPredicted RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms