RNA–Protein interactions for RNA: ENST00000407404.5

NR1H3-204, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5 BASIC

Gene NR1H3, Length 1,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-204ENST00000407404 SLC15A2Q16348 729 aa22.19■■□□□ 1.14
NR1H3-204ENST00000407404 HMGB2P26583 209 aaKnown RBP22.18■■□□□ 1.14
NR1H3-204ENST00000407404 MAPK8IP3Q9UPT6 1336 aa22.18■■□□□ 1.14
NR1H3-204ENST00000407404 MRC1P22897 1456 aa22.18■■□□□ 1.14
NR1H3-204ENST00000407404 IL17REQ8NFR9 667 aa22.17■■□□□ 1.14
NR1H3-204ENST00000407404 LOC102724428A0A0B4J2F2 783 aa22.16■■□□□ 1.14
NR1H3-204ENST00000407404 SIK1P57059 783 aa22.16■■□□□ 1.14
NR1H3-204ENST00000407404 RTF1Q92541 710 aaKnown RBP22.15■■□□□ 1.14
NR1H3-204ENST00000407404 C5P01031 1676 aa22.14■■□□□ 1.14
NR1H3-204ENST00000407404 TEFQ10587 303 aa22.14■■□□□ 1.14
NR1H3-204ENST00000407404 ZNF827Q17R98 1081 aa22.14■■□□□ 1.14
NR1H3-204ENST00000407404 AKT1S1Q96B36 256 aa22.14■■□□□ 1.14
NR1H3-204ENST00000407404 RBM42Q9BTD8 480 aaKnown RBP22.14■■□□□ 1.14
NR1H3-204ENST00000407404 HTATSF1O43719 755 aaKnown RBP22.13■■□□□ 1.13
NR1H3-204ENST00000407404 ATP6V1AP38606 617 aa22.13■■□□□ 1.13
NR1H3-204ENST00000407404 NFE2L2Q16236 605 aa22.13■■□□□ 1.13
NR1H3-204ENST00000407404 ADAMTS8Q9UP79 889 aa22.13■■□□□ 1.13
NR1H3-204ENST00000407404 TAF1LQ8IZX4 1826 aa22.13■■□□□ 1.13
NR1H3-204ENST00000407404 CEMIPQ8WUJ3 1361 aa22.13■■□□□ 1.13
NR1H3-204ENST00000407404 CCDC184Q52MB2 194 aa22.11■■□□□ 1.13
NR1H3-204ENST00000407404 DLG5Q8TDM6 1919 aa22.11■■□□□ 1.13
NR1H3-204ENST00000407404 PTCD1O75127 700 aaKnown RBP22.1■■□□□ 1.13
NR1H3-204ENST00000407404 MCM10Q7L590 875 aa22.1■■□□□ 1.13
NR1H3-204ENST00000407404 CCDC146Q8IYE0 955 aa22.1■■□□□ 1.13
NR1H3-204ENST00000407404 RUNDC1Q96C34 613 aa22.1■■□□□ 1.13
NR1H3-204ENST00000407404 TFCP2L1Q9NZI6 479 aa22.1■■□□□ 1.13
NR1H3-204ENST00000407404 ZNF831Q5JPB2 1677 aa22.1■■□□□ 1.13
NR1H3-204ENST00000407404 SIPA1L3O60292 1781 aaPredicted RBP22.1■■□□□ 1.13
NR1H3-204ENST00000407404 SLC39A6Q13433 755 aa22.09■■□□□ 1.13
NR1H3-204ENST00000407404 ITPK1Q13572 414 aa22.09■■□□□ 1.13
NR1H3-204ENST00000407404 C4BP0C0L5 1744 aa22.08■■□□□ 1.13
NR1H3-204ENST00000407404 DCTN1Q14203 1278 aa22.08■■□□□ 1.13
NR1H3-204ENST00000407404 CASZ1Q86V15 1759 aa22.08■■□□□ 1.13
NR1H3-204ENST00000407404 LINC00116Q8NCU8 138 aa22.08■■□□□ 1.13
NR1H3-204ENST00000407404 SLC4A9Q96Q91 983 aa22.08■■□□□ 1.13
NR1H3-204ENST00000407404 MRS2Q9HD23 443 aa22.08■■□□□ 1.13
NR1H3-204ENST00000407404 QSER1Q2KHR3 1735 aa22.08■■□□□ 1.12
NR1H3-204ENST00000407404 RIPK4P57078 832 aa22.06■■□□□ 1.12
NR1H3-204ENST00000407404 TTC5Q8N0Z6 440 aa22.06■■□□□ 1.12
NR1H3-204ENST00000407404 PDGFDQ9GZP0 370 aaPredicted RBP22.06■■□□□ 1.12
NR1H3-204ENST00000407404 TMPOP42166 694 aaKnown RBP22.06■■□□□ 1.12
NR1H3-204ENST00000407404 AK7Q96M32 723 aa22.06■■□□□ 1.12
NR1H3-204ENST00000407404 TUBGCP6Q96RT7 1819 aa22.05■■□□□ 1.12
NR1H3-204ENST00000407404 PNPLA7Q6ZV29 1317 aa22.05■■□□□ 1.12
NR1H3-204ENST00000407404 BTBD11A6QL63 1104 aa22.05■■□□□ 1.12
NR1H3-204ENST00000407404 ZNF790Q6PG37 636 aa22.05■■□□□ 1.12
NR1H3-204ENST00000407404 KCPQ6ZWJ8 1503 aa22.04■■□□□ 1.12
NR1H3-204ENST00000407404 UBR2Q8IWV8 1755 aa22.03■■□□□ 1.12
NR1H3-204ENST00000407404 COL5A3P25940 1745 aaPredicted RBP22.03■■□□□ 1.12
NR1H3-204ENST00000407404 LMOD3Q0VAK6 560 aa22.03■■□□□ 1.12
NR1H3-204ENST00000407404 PNISRQ8TF01 805 aaKnown RBP22.03■■□□□ 1.12
NR1H3-204ENST00000407404 RRP7AQ9Y3A4 280 aaKnown RBP22.03■■□□□ 1.12
NR1H3-204ENST00000407404 LRP5O75197 1615 aa22.02■■□□□ 1.12
NR1H3-204ENST00000407404 CICQ96RK0 1608 aaPredicted RBP22.02■■□□□ 1.12
NR1H3-204ENST00000407404 TJP1Q07157 1748 aa22.02■■□□□ 1.12
NR1H3-204ENST00000407404 TAF7Q15545 349 aaPredicted RBP22.02■■□□□ 1.12
NR1H3-204ENST00000407404 NEUROD2Q15784 382 aa22.02■■□□□ 1.12
NR1H3-204ENST00000407404 FLAD1Q8NFF5 587 aa22.02■■□□□ 1.12
NR1H3-204ENST00000407404 ZBTB7AO95365 584 aa22.01■■□□□ 1.11
NR1H3-204ENST00000407404 RC3H1Q5TC82 1133 aaKnown RBP22.01■■□□□ 1.11
NR1H3-204ENST00000407404 VSIG10Q8N0Z9 540 aa22.01■■□□□ 1.11
NR1H3-204ENST00000407404 THUMPD2Q9BTF0 503 aaKnown RBP22.01■■□□□ 1.11
NR1H3-204ENST00000407404 SPON1Q9HCB6 807 aa22.01■■□□□ 1.11
NR1H3-204ENST00000407404 CNTNAP4Q9C0A0 1308 aa22■■□□□ 1.11
NR1H3-204ENST00000407404 UBR3Q6ZT12 1888 aa22■■□□□ 1.11
NR1H3-204ENST00000407404 GNPATO15228 680 aa22■■□□□ 1.11
NR1H3-204ENST00000407404 MSH5O43196 834 aa22■■□□□ 1.11
NR1H3-204ENST00000407404 COL23A1Q86Y22 540 aaPredicted RBP22■■□□□ 1.11
NR1H3-204ENST00000407404 DNAJC10Q8IXB1 793 aa22■■□□□ 1.11
NR1H3-204ENST00000407404 SLC16A10Q8TF71 515 aa22■■□□□ 1.11
NR1H3-204ENST00000407404 ZNF496Q96IT1 587 aaPredicted RBP22■■□□□ 1.11
NR1H3-204ENST00000407404 KCNQ3O43525 872 aa21.99■■□□□ 1.11
NR1H3-204ENST00000407404 FMNL2Q96PY5 1086 aa21.99■■□□□ 1.11
NR1H3-204ENST00000407404 MTFR1LQ9H019 292 aa21.99■■□□□ 1.11
NR1H3-204ENST00000407404 SSFA2P28290 1259 aa21.98■■□□□ 1.11
NR1H3-204ENST00000407404 ATF5Q9Y2D1 282 aaPredicted RBP21.98■■□□□ 1.11
NR1H3-204ENST00000407404 HEG1Q9ULI3 1381 aa21.98■■□□□ 1.11
NR1H3-204ENST00000407404 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.97■■□□□ 1.11
NR1H3-204ENST00000407404 APAF1O14727 1248 aa21.97■■□□□ 1.11
NR1H3-204ENST00000407404 PHF14O94880 888 aa21.97■■□□□ 1.11
NR1H3-204ENST00000407404 CRKLP46109 303 aaKnown RBP21.97■■□□□ 1.11
NR1H3-204ENST00000407404 RTCBQ9Y3I0 505 aaKnown RBP21.97■■□□□ 1.11
NR1H3-204ENST00000407404 AMIGO3Q86WK7 504 aa21.96■■□□□ 1.11
NR1H3-204ENST00000407404 MIS18AQ9NYP9 233 aa21.96■■□□□ 1.11
NR1H3-204ENST00000407404 RPS6KA4O75676 772 aa21.95■■□□□ 1.1
NR1H3-204ENST00000407404 SMIM5Q71RC9 77 aa21.95■■□□□ 1.1
NR1H3-204ENST00000407404 TEX13AQ9BXU3 409 aaPredicted RBP21.95■■□□□ 1.1
NR1H3-204ENST00000407404 TRIM35Q9UPQ4 493 aa21.95■■□□□ 1.1
NR1H3-204ENST00000407404 CYP19A1P11511 503 aaPredicted RBP21.94■■□□□ 1.1
NR1H3-204ENST00000407404 CCDC87Q9NVE4 849 aa21.94■■□□□ 1.1
NR1H3-204ENST00000407404 MYH14Q7Z406 1995 aaKnown RBP21.93■■□□□ 1.1
NR1H3-204ENST00000407404 STARD3NLO95772 234 aa21.93■■□□□ 1.1
NR1H3-204ENST00000407404 TRAPPC3LQ5T215 181 aa21.93■■□□□ 1.1
NR1H3-204ENST00000407404 INTS5Q6P9B9 1019 aaKnown RBP21.93■■□□□ 1.1
NR1H3-204ENST00000407404 KDM3BQ7LBC6 1761 aa21.93■■□□□ 1.1
NR1H3-204ENST00000407404 ADRA2BP18089 450 aa21.92■■□□□ 1.1
NR1H3-204ENST00000407404 PTGER2P43116 358 aa21.92■■□□□ 1.1
NR1H3-204ENST00000407404 SNRPA1P09661 255 aaKnown RBP21.9■■□□□ 1.1
NR1H3-204ENST00000407404 FAM9BQ8IZU0 186 aa21.9■■□□□ 1.1
NR1H3-204ENST00000407404 BABAM1Q9NWV8 329 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms