RNA–Protein interactions for RNA: ENST00000407249.7

CDK11B-204, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-204ENST00000407249 PHACTR3Q96KR7 559 aa20.08■□□□□ 0.81
CDK11B-204ENST00000407249 PRDM10Q9NQV6 1147 aa20.08■□□□□ 0.81
CDK11B-204ENST00000407249 EIF4A2Q14240 407 aaKnown RBP20.08■□□□□ 0.8
CDK11B-204ENST00000407249 ARHGEF10O15013 1369 aa20.07■□□□□ 0.8
CDK11B-204ENST00000407249 TSPYL6Q8N831 410 aa20.07■□□□□ 0.8
CDK11B-204ENST00000407249 FLT4P35916 1363 aa20.07■□□□□ 0.8
CDK11B-204ENST00000407249 ABCC4O15439 1325 aa20.07■□□□□ 0.8
CDK11B-204ENST00000407249 NPHP4O75161 1426 aaPredicted RBP20.07■□□□□ 0.8
CDK11B-204ENST00000407249 DLG5Q8TDM6 1919 aa20.06■□□□□ 0.8
CDK11B-204ENST00000407249 GOLGA6L22H0YM25 854 aa20.06■□□□□ 0.8
CDK11B-204ENST00000407249 CDC45O75419 566 aa20.06■□□□□ 0.8
CDK11B-204ENST00000407249 ADGRL3Q9HAR2 1447 aa20.06■□□□□ 0.8
CDK11B-204ENST00000407249 KLHL40Q2TBA0 621 aa20.05■□□□□ 0.8
CDK11B-204ENST00000407249 IBTKQ9P2D0 1353 aaPredicted RBP20.05■□□□□ 0.8
CDK11B-204ENST00000407249 THUMPD2Q9BTF0 503 aaKnown RBP20.05■□□□□ 0.8
CDK11B-204ENST00000407249 ZNF853P0CG23 659 aa20.04■□□□□ 0.8
CDK11B-204ENST00000407249 NWD1Q149M9 1564 aa20.04■□□□□ 0.8
CDK11B-204ENST00000407249 BAG4O95429 457 aaKnown RBP20.04■□□□□ 0.8
CDK11B-204ENST00000407249 CCDC173Q0VFZ6 552 aa20.04■□□□□ 0.8
CDK11B-204ENST00000407249 PPP1R9BQ96SB3 815 aa20.04■□□□□ 0.8
CDK11B-204ENST00000407249 GSPT1P15170 499 aaKnown RBP20.03■□□□□ 0.8
CDK11B-204ENST00000407249 NASPP49321 788 aaPredicted RBP20.03■□□□□ 0.8
CDK11B-204ENST00000407249 TAF3Q5VWG9 929 aa20.03■□□□□ 0.8
CDK11B-204ENST00000407249 HDAC5Q9UQL6 1122 aa20.02■□□□□ 0.8
CDK11B-204ENST00000407249 DDX49Q9Y6V7 483 aaKnown RBP20.02■□□□□ 0.8
CDK11B-204ENST00000407249 MAP3K19Q56UN5 1328 aa20.02■□□□□ 0.79
CDK11B-204ENST00000407249 ELL2O00472 640 aaPredicted RBP20.01■□□□□ 0.79
CDK11B-204ENST00000407249 FAM193AP78312 1265 aa20.01■□□□□ 0.79
CDK11B-204ENST00000407249 CFAP44Q96MT7 982 aa20.01■□□□□ 0.79
CDK11B-204ENST00000407249 MBIPQ9NS73 344 aa20.01■□□□□ 0.79
CDK11B-204ENST00000407249 MARF1Q9Y4F3 1742 aaKnown RBP20.01■□□□□ 0.79
CDK11B-204ENST00000407249 PLEKHM2Q8IWE5 1019 aa20.01■□□□□ 0.79
CDK11B-204ENST00000407249 RABEP1Q15276 862 aa20■□□□□ 0.79
CDK11B-204ENST00000407249 SULT6B1Q6IMI4 303 aa20■□□□□ 0.79
CDK11B-204ENST00000407249 ZSCAN20P17040 1043 aaPredicted RBP20■□□□□ 0.79
CDK11B-204ENST00000407249 GRIPAP1Q4V328 841 aa20■□□□□ 0.79
CDK11B-204ENST00000407249 DNTTIP2Q5QJE6 756 aaKnown RBP19.99■□□□□ 0.79
CDK11B-204ENST00000407249 TWISTNBQ3B726 338 aaPredicted RBP19.99■□□□□ 0.79
CDK11B-204ENST00000407249 MTERF4Q7Z6M4 381 aaKnown RBP19.99■□□□□ 0.79
CDK11B-204ENST00000407249 RTL1A6NKG5 1358 aa19.99■□□□□ 0.79
CDK11B-204ENST00000407249 KDRP35968 1356 aa19.99■□□□□ 0.79
CDK11B-204ENST00000407249 HSP90AB2PQ58FF8 381 aa19.99■□□□□ 0.79
CDK11B-204ENST00000407249 PHF8Q9UPP1 1060 aa19.99■□□□□ 0.79
CDK11B-204ENST00000407249 TICAM2Q86XR7 235 aa19.98■□□□□ 0.79
CDK11B-204ENST00000407249 API5Q9BZZ5 524 aaKnown RBP19.98■□□□□ 0.79
CDK11B-204ENST00000407249 DCTPP1Q9H773 170 aa19.98■□□□□ 0.79
CDK11B-204ENST00000407249 NLRP6P59044 892 aa19.97■□□□□ 0.79
CDK11B-204ENST00000407249 ZSCAN30Q86W11 494 aa19.97■□□□□ 0.79
CDK11B-204ENST00000407249 CYP2E1P05181 493 aaPredicted RBP19.97■□□□□ 0.79
CDK11B-204ENST00000407249 PTMAP06454 111 aaKnown RBP19.97■□□□□ 0.79
CDK11B-204ENST00000407249 ZNF445P59923 1031 aa19.97■□□□□ 0.79
CDK11B-204ENST00000407249 NUCB2P80303 420 aa19.97■□□□□ 0.79
CDK11B-204ENST00000407249 C8orf58Q8NAV2 365 aa19.97■□□□□ 0.79
CDK11B-204ENST00000407249 GTPBP4Q9BZE4 634 aaKnown RBP19.97■□□□□ 0.79
CDK11B-204ENST00000407249 CCDC9Q9Y3X0 531 aaKnown RBP19.97■□□□□ 0.79
CDK11B-204ENST00000407249 AMPHP49418 695 aa19.96■□□□□ 0.79
CDK11B-204ENST00000407249 TTC22Q5TAA0 569 aa19.96■□□□□ 0.79
CDK11B-204ENST00000407249 USP26Q9BXU7 913 aa19.96■□□□□ 0.79
CDK11B-204ENST00000407249 LETM1O95202 739 aaPredicted RBP19.96■□□□□ 0.79
CDK11B-204ENST00000407249 IGSF1Q8N6C5 1336 aa19.96■□□□□ 0.79
CDK11B-204ENST00000407249 AEBP1Q8IUX7 1158 aa19.95■□□□□ 0.78
CDK11B-204ENST00000407249 TERF1P54274 439 aa19.95■□□□□ 0.78
CDK11B-204ENST00000407249 PSEN1P49768 467 aa19.94■□□□□ 0.78
CDK11B-204ENST00000407249 MCTP1Q6DN14 999 aa19.94■□□□□ 0.78
CDK11B-204ENST00000407249 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.94■□□□□ 0.78
CDK11B-204ENST00000407249 TPRNQ4KMQ1 711 aa19.93■□□□□ 0.78
CDK11B-204ENST00000407249 ZNF622Q969S3 477 aaKnown RBP eCLIP19.93■□□□□ 0.781e-6■■■□□ 18.5
CDK11B-204ENST00000407249 LMBRD1Q9NUN5 540 aa19.93■□□□□ 0.78
CDK11B-204ENST00000407249 KIAA1211Q6ZU35 1233 aa19.93■□□□□ 0.78
CDK11B-204ENST00000407249 MAPK8IP2Q13387 824 aaPredicted RBP19.92■□□□□ 0.78
CDK11B-204ENST00000407249 TMED8Q6PL24 325 aaPredicted RBP19.92■□□□□ 0.78
CDK11B-204ENST00000407249 C16orf71Q8IYS4 520 aaPredicted RBP19.92■□□□□ 0.78
CDK11B-204ENST00000407249 ABTB2Q8N961 1025 aa19.92■□□□□ 0.78
CDK11B-204ENST00000407249 KIAA0232Q92628 1395 aa19.92■□□□□ 0.78
CDK11B-204ENST00000407249 PKP1Q13835 747 aa19.92■□□□□ 0.78
CDK11B-204ENST00000407249 ZSCAN23Q3MJ62 389 aa19.92■□□□□ 0.78
CDK11B-204ENST00000407249 AXDND1Q5T1B0 1012 aaPredicted RBP19.92■□□□□ 0.78
CDK11B-204ENST00000407249 INTS3Q68E01 1043 aaKnown RBP19.92■□□□□ 0.78
CDK11B-204ENST00000407249 PATL2C9JE40 543 aaKnown RBP19.91■□□□□ 0.78
CDK11B-204ENST00000407249 CAVIN1Q6NZI2 390 aaKnown RBP19.91■□□□□ 0.78
CDK11B-204ENST00000407249 PHRF1Q9P1Y6 1649 aaKnown RBP19.91■□□□□ 0.78
CDK11B-204ENST00000407249 CWC22Q9HCG8 908 aaKnown RBP19.91■□□□□ 0.78
CDK11B-204ENST00000407249 SOX12O15370 315 aa19.9■□□□□ 0.78
CDK11B-204ENST00000407249 HTATSF1O43719 755 aaKnown RBP19.9■□□□□ 0.78
CDK11B-204ENST00000407249 OFD1O75665 1012 aa19.9■□□□□ 0.78
CDK11B-204ENST00000407249 APPP05067 770 aa19.9■□□□□ 0.78
CDK11B-204ENST00000407249 HOXC9P31274 260 aa19.9■□□□□ 0.78
CDK11B-204ENST00000407249 ANKRD44Q8N8A2 993 aa19.9■□□□□ 0.78
CDK11B-204ENST00000407249 KIF1AQ12756 1690 aa19.9■□□□□ 0.78
CDK11B-204ENST00000407249 AK9Q5TCS8 1911 aa19.89■□□□□ 0.77
CDK11B-204ENST00000407249 CHL1O00533 1208 aa19.89■□□□□ 0.77
CDK11B-204ENST00000407249 MYCNP04198 464 aaPredicted RBP19.89■□□□□ 0.77
CDK11B-204ENST00000407249 SLC20A2Q08357 652 aa19.89■□□□□ 0.77
CDK11B-204ENST00000407249 OTUD7AQ8TE49 926 aaPredicted RBP19.89■□□□□ 0.77
CDK11B-204ENST00000407249 NFAT5O94916 1531 aa19.89■□□□□ 0.77
CDK11B-204ENST00000407249 ATP10DQ9P241 1426 aa19.89■□□□□ 0.77
CDK11B-204ENST00000407249 MSNP26038 577 aaKnown RBP19.89■□□□□ 0.77
CDK11B-204ENST00000407249 HS1BP3Q53T59 392 aa19.89■□□□□ 0.77
CDK11B-204ENST00000407249 FAM83GA6ND36 823 aa19.88■□□□□ 0.77
CDK11B-204ENST00000407249 SDSP20132 328 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms