RNA–Protein interactions for RNA: ENST00000405384.6

ATL2-203, Transcript of atlastin GTPase 2, humanhuman

TSL 1 (best)

Gene ATL2, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL2-203ENST00000405384 MIS18AQ9NYP9 233 aa17.67■□□□□ 0.42
ATL2-203ENST00000405384 SLC39A6Q13433 755 aa17.66■□□□□ 0.42
ATL2-203ENST00000405384 NCBP3Q53F19 620 aaKnown RBP17.66■□□□□ 0.42
ATL2-203ENST00000405384 ASAP1Q9ULH1 1129 aa17.66■□□□□ 0.42
ATL2-203ENST00000405384 TAF7Q15545 349 aaPredicted RBP17.65■□□□□ 0.42
ATL2-203ENST00000405384 LAS1LQ9Y4W2 734 aaKnown RBP17.65■□□□□ 0.42
ATL2-203ENST00000405384 NGEFQ8N5V2 710 aa17.64■□□□□ 0.42
ATL2-203ENST00000405384 YTHDC1Q96MU7 727 aaKnown RBP17.64■□□□□ 0.42
ATL2-203ENST00000405384 BTAF1O14981 1849 aa17.64■□□□□ 0.42
ATL2-203ENST00000405384 ZNF521Q96K83 1311 aa17.64■□□□□ 0.41
ATL2-203ENST00000405384 SIPA1L3O60292 1781 aaPredicted RBP17.64■□□□□ 0.41
ATL2-203ENST00000405384 BTBD11A6QL63 1104 aa17.64■□□□□ 0.41
ATL2-203ENST00000405384 KCNQ3O43525 872 aa17.64■□□□□ 0.41
ATL2-203ENST00000405384 ATG3Q9NT62 314 aa17.64■□□□□ 0.41
ATL2-203ENST00000405384 APBA3O96018 575 aa17.63■□□□□ 0.41
ATL2-203ENST00000405384 TNS1Q9HBL0 1735 aaKnown RBP17.62■□□□□ 0.41
ATL2-203ENST00000405384 UPF1Q92900 1129 aaKnown RBP eCLIP17.62■□□□□ 0.41
ATL2-203ENST00000405384 SPINK5Q9NQ38 1064 aaPredicted RBP17.62■□□□□ 0.41
ATL2-203ENST00000405384 WDR63Q8IWG1 891 aa17.61■□□□□ 0.41
ATL2-203ENST00000405384 TSPYL4Q9UJ04 414 aa17.61■□□□□ 0.41
ATL2-203ENST00000405384 CHL1O00533 1208 aa17.6■□□□□ 0.41
ATL2-203ENST00000405384 CALD1Q05682 793 aaKnown RBP17.6■□□□□ 0.41
ATL2-203ENST00000405384 ZNF790Q6PG37 636 aa17.6■□□□□ 0.41
ATL2-203ENST00000405384 CFAP44Q96MT7 982 aa17.6■□□□□ 0.41
ATL2-203ENST00000405384 PTCD1O75127 700 aaKnown RBP17.6■□□□□ 0.41
ATL2-203ENST00000405384 ZNF853P0CG23 659 aa17.6■□□□□ 0.41
ATL2-203ENST00000405384 IFT57Q9NWB7 429 aa17.6■□□□□ 0.41
ATL2-203ENST00000405384 PALLDQ8WX93 1383 aa17.6■□□□□ 0.41
ATL2-203ENST00000405384 SF3B2Q13435 895 aaKnown RBP17.59■□□□□ 0.41
ATL2-203ENST00000405384 DEFB132Q7Z7B7 95 aa17.59■□□□□ 0.41
ATL2-203ENST00000405384 MBIPQ9NS73 344 aa17.59■□□□□ 0.41
ATL2-203ENST00000405384 TTC5Q8N0Z6 440 aa17.59■□□□□ 0.41
ATL2-203ENST00000405384 TSR2Q969E8 191 aaKnown RBP17.59■□□□□ 0.41
ATL2-203ENST00000405384 CDCA7LQ96GN5 454 aa17.59■□□□□ 0.41
ATL2-203ENST00000405384 PAPPAQ13219 1627 aa17.58■□□□□ 0.4
ATL2-203ENST00000405384 KCNQ4P56696 695 aa17.58■□□□□ 0.4
ATL2-203ENST00000405384 GNAI1P63096 354 aa17.58■□□□□ 0.4
ATL2-203ENST00000405384 EN1Q05925 392 aaPredicted RBP17.58■□□□□ 0.4
ATL2-203ENST00000405384 SMARCC1Q92922 1105 aaPredicted RBP17.58■□□□□ 0.4
ATL2-203ENST00000405384 RBM42Q9BTD8 480 aaKnown RBP17.58■□□□□ 0.4
ATL2-203ENST00000405384 IL16Q14005 1332 aa17.58■□□□□ 0.4
ATL2-203ENST00000405384 GOLGA2Q08379 1002 aa17.57■□□□□ 0.4
ATL2-203ENST00000405384 ZNF496Q96IT1 587 aaPredicted RBP17.57■□□□□ 0.4
ATL2-203ENST00000405384 ZBED9Q6R2W3 1325 aa17.57■□□□□ 0.4
ATL2-203ENST00000405384 CCDC125Q86Z20 511 aa17.57■□□□□ 0.4
ATL2-203ENST00000405384 SLC4A9Q96Q91 983 aa17.57■□□□□ 0.4
ATL2-203ENST00000405384 KDM3BQ7LBC6 1761 aa17.56■□□□□ 0.4
ATL2-203ENST00000405384 KCPQ6ZWJ8 1503 aa17.56■□□□□ 0.4
ATL2-203ENST00000405384 PLSCR1O15162 318 aa17.56■□□□□ 0.4
ATL2-203ENST00000405384 BABAM1Q9NWV8 329 aa17.56■□□□□ 0.4
ATL2-203ENST00000405384 LOC102724428A0A0B4J2F2 783 aa17.55■□□□□ 0.4
ATL2-203ENST00000405384 BAG6P46379 1132 aa17.55■□□□□ 0.4
ATL2-203ENST00000405384 SIK1P57059 783 aa17.55■□□□□ 0.4
ATL2-203ENST00000405384 EZH2Q15910 746 aaKnown RBP17.55■□□□□ 0.4
ATL2-203ENST00000405384 KRT24Q2M2I5 525 aa17.55■□□□□ 0.4
ATL2-203ENST00000405384 PROM2Q8N271 834 aa17.55■□□□□ 0.4
ATL2-203ENST00000405384 EIF4A1P60842 406 aaKnown RBP17.55■□□□□ 0.4
ATL2-203ENST00000405384 CAMKK2Q96RR4 588 aa17.55■□□□□ 0.4
ATL2-203ENST00000405384 FANCIQ9NVI1 1328 aa17.54■□□□□ 0.4
ATL2-203ENST00000405384 SLFN5Q08AF3 891 aa17.54■□□□□ 0.4
ATL2-203ENST00000405384 FMNL2Q96PY5 1086 aa17.54■□□□□ 0.4
ATL2-203ENST00000405384 UBR2Q8IWV8 1755 aa17.54■□□□□ 0.4
ATL2-203ENST00000405384 PRAMEF22A3QJZ6 481 aa17.53■□□□□ 0.4
ATL2-203ENST00000405384 TXNRD1Q16881 649 aa17.53■□□□□ 0.4
ATL2-203ENST00000405384 LRRC4BQ9NT99 713 aa17.53■□□□□ 0.4
ATL2-203ENST00000405384 CCNL1Q9UK58 526 aaPredicted RBP17.53■□□□□ 0.4
ATL2-203ENST00000405384 LY75O60449 1722 aa17.53■□□□□ 0.4
ATL2-203ENST00000405384 E9PSI1 815 aa17.53■□□□□ 0.4
ATL2-203ENST00000405384 ATP6V1AP38606 617 aa17.53■□□□□ 0.4
ATL2-203ENST00000405384 ITPK1Q13572 414 aa17.53■□□□□ 0.4
ATL2-203ENST00000405384 MYH16Q9H6N6 1097 aa17.52■□□□□ 0.4
ATL2-203ENST00000405384 HEG1Q9ULI3 1381 aa17.52■□□□□ 0.39
ATL2-203ENST00000405384 DNAJC10Q8IXB1 793 aa17.51■□□□□ 0.39
ATL2-203ENST00000405384 C8orf58Q8NAV2 365 aa17.51■□□□□ 0.39
ATL2-203ENST00000405384 ELL2O00472 640 aaPredicted RBP17.5■□□□□ 0.39
ATL2-203ENST00000405384 GIGYF1O75420 1035 aaPredicted RBP17.49■□□□□ 0.39
ATL2-203ENST00000405384 TRMT2AQ8IZ69 625 aaKnown RBP17.49■□□□□ 0.39
ATL2-203ENST00000405384 TSPYL6Q8N831 410 aa17.49■□□□□ 0.39
ATL2-203ENST00000405384 SNRPA1P09661 255 aaKnown RBP17.49■□□□□ 0.39
ATL2-203ENST00000405384 EXOSC9Q06265 439 aaKnown RBP17.49■□□□□ 0.39
ATL2-203ENST00000405384 SLC27A3Q5K4L6 730 aa17.49■□□□□ 0.39
ATL2-203ENST00000405384 DUSP27Q5VZP5 1158 aa17.49■□□□□ 0.39
ATL2-203ENST00000405384 VSIG10Q8N0Z9 540 aa17.49■□□□□ 0.39
ATL2-203ENST00000405384 LINC00116Q8NCU8 138 aa17.49■□□□□ 0.39
ATL2-203ENST00000405384 USP16Q9Y5T5 823 aa17.49■□□□□ 0.39
ATL2-203ENST00000405384 RGPD3A6NKT7 1758 aaPredicted RBP17.48■□□□□ 0.39
ATL2-203ENST00000405384 RGPD4Q7Z3J3 1758 aa17.48■□□□□ 0.39
ATL2-203ENST00000405384 TJP1Q07157 1748 aa17.48■□□□□ 0.39
ATL2-203ENST00000405384 C5P01031 1676 aa17.47■□□□□ 0.39
ATL2-203ENST00000405384 NECTIN2Q92692 538 aa17.46■□□□□ 0.39
ATL2-203ENST00000405384 CYP19A1P11511 503 aaPredicted RBP17.45■□□□□ 0.38
ATL2-203ENST00000405384 EIF2S2P20042 333 aaKnown RBP17.45■□□□□ 0.38
ATL2-203ENST00000405384 RREB1Q92766 1687 aa17.44■□□□□ 0.38
ATL2-203ENST00000405384 SOCS7O14512 581 aa17.44■□□□□ 0.38
ATL2-203ENST00000405384 PIP4K2AP48426 406 aaPredicted RBP17.44■□□□□ 0.38
ATL2-203ENST00000405384 TWISTNBQ3B726 338 aaPredicted RBP17.44■□□□□ 0.38
ATL2-203ENST00000405384 TEX13AQ9BXU3 409 aaPredicted RBP17.44■□□□□ 0.38
ATL2-203ENST00000405384 ZNF831Q5JPB2 1677 aa17.44■□□□□ 0.38
ATL2-203ENST00000405384 TAF1LQ8IZX4 1826 aa17.44■□□□□ 0.38
ATL2-203ENST00000405384 A1BGP04217 495 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms