RNA–Protein interactions for RNA: ENST00000404603.5

SNRPD3-203, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 5

Gene SNRPD3, Length 715 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-203ENST00000404603 LHX8Q68G74 356 aa11.01□□□□□ -0.65
SNRPD3-203ENST00000404603 AEBP1Q8IUX7 1158 aa11.01□□□□□ -0.65
SNRPD3-203ENST00000404603 DDX54Q8TDD1 881 aaKnown RBP11.01□□□□□ -0.65
SNRPD3-203ENST00000404603 ADAMTS8Q9UP79 889 aa11.01□□□□□ -0.65
SNRPD3-203ENST00000404603 MAP3K5Q99683 1374 aa11.01□□□□□ -0.65
SNRPD3-203ENST00000404603 BRWD3Q6RI45 1802 aa11□□□□□ -0.65
SNRPD3-203ENST00000404603 ERVV-2B6SEH9 535 aa11□□□□□ -0.65
SNRPD3-203ENST00000404603 PHKG2P15735 406 aa11□□□□□ -0.65
SNRPD3-203ENST00000404603 CLCN6P51797 869 aa11□□□□□ -0.65
SNRPD3-203ENST00000404603 NKX1-1Q15270 411 aaPredicted RBP11□□□□□ -0.65
SNRPD3-203ENST00000404603 NFE2L2Q16236 605 aa11□□□□□ -0.65
SNRPD3-203ENST00000404603 MIER1Q8N108 512 aa11□□□□□ -0.65
SNRPD3-203ENST00000404603 POTEIP0CG38 1075 aa10.99□□□□□ -0.65
SNRPD3-203ENST00000404603 FAM9BQ8IZU0 186 aa10.99□□□□□ -0.65
SNRPD3-203ENST00000404603 PLEKHF1Q96S99 279 aa10.99□□□□□ -0.65
SNRPD3-203ENST00000404603 TEFQ10587 303 aa10.98□□□□□ -0.65
SNRPD3-203ENST00000404603 CCDC27Q2M243 656 aa10.97□□□□□ -0.65
SNRPD3-203ENST00000404603 MTHFSDQ2M296 383 aaKnown RBP10.97□□□□□ -0.65
SNRPD3-203ENST00000404603 MARCH10Q8NA82 808 aaPredicted RBP10.97□□□□□ -0.65
SNRPD3-203ENST00000404603 BABAM1Q9NWV8 329 aa10.97□□□□□ -0.65
SNRPD3-203ENST00000404603 CYP27B1O15528 508 aa10.96□□□□□ -0.65
SNRPD3-203ENST00000404603 TMPOP42166 694 aaKnown RBP10.96□□□□□ -0.65
SNRPD3-203ENST00000404603 RIPK4P57078 832 aa10.96□□□□□ -0.65
SNRPD3-203ENST00000404603 ZNF579Q8NAF0 562 aaKnown RBP10.96□□□□□ -0.65
SNRPD3-203ENST00000404603 UPF1Q92900 1129 aaKnown RBP eCLIP10.96□□□□□ -0.659e-8■■■■□ 23
SNRPD3-203ENST00000404603 SMARCC1Q92922 1105 aaPredicted RBP10.96□□□□□ -0.65
SNRPD3-203ENST00000404603 CHMP4AQ9BY43 222 aa10.96□□□□□ -0.65
SNRPD3-203ENST00000404603 BCL11BQ9C0K0 894 aaPredicted RBP10.96□□□□□ -0.65
SNRPD3-203ENST00000404603 TMOD3Q9NYL9 352 aa10.96□□□□□ -0.65
SNRPD3-203ENST00000404603 CABP4P57796 275 aa10.95□□□□□ -0.66
SNRPD3-203ENST00000404603 PHACTR3Q96KR7 559 aa10.95□□□□□ -0.66
SNRPD3-203ENST00000404603 SHANK3Q9BYB0 1731 aa10.95□□□□□ -0.66
SNRPD3-203ENST00000404603 NHSQ6T4R5 1651 aa10.95□□□□□ -0.66
SNRPD3-203ENST00000404603 MRC1P22897 1456 aa10.94□□□□□ -0.66
SNRPD3-203ENST00000404603 CEMIPQ8WUJ3 1361 aa10.94□□□□□ -0.66
SNRPD3-203ENST00000404603 CCDC146Q8IYE0 955 aa10.94□□□□□ -0.66
SNRPD3-203ENST00000404603 SYTL4Q96C24 671 aaPredicted RBP10.94□□□□□ -0.66
SNRPD3-203ENST00000404603 ADAMTS7Q9UKP4 1686 aa10.93□□□□□ -0.66
SNRPD3-203ENST00000404603 APAF1O14727 1248 aa10.93□□□□□ -0.66
SNRPD3-203ENST00000404603 RNMTO43148 476 aaKnown RBP10.93□□□□□ -0.66
SNRPD3-203ENST00000404603 BAG6P46379 1132 aa10.93□□□□□ -0.66
SNRPD3-203ENST00000404603 CCDC184Q52MB2 194 aa10.93□□□□□ -0.66
SNRPD3-203ENST00000404603 FAM182BQ5T319 152 aa10.93□□□□□ -0.66
SNRPD3-203ENST00000404603 TTC5Q8N0Z6 440 aa10.93□□□□□ -0.66
SNRPD3-203ENST00000404603 SLC52A2Q9HAB3 445 aa10.93□□□□□ -0.66
SNRPD3-203ENST00000404603 MPRIPQ6WCQ1 1025 aa10.92□□□□□ -0.66
SNRPD3-203ENST00000404603 SCN11AQ9UI33 1791 aa10.92□□□□□ -0.66
SNRPD3-203ENST00000404603 DOT1LQ8TEK3 1739 aa10.92□□□□□ -0.66
SNRPD3-203ENST00000404603 IL16Q14005 1332 aa10.91□□□□□ -0.66
SNRPD3-203ENST00000404603 RGPD3A6NKT7 1758 aaPredicted RBP10.91□□□□□ -0.66
SNRPD3-203ENST00000404603 RGPD4Q7Z3J3 1758 aa10.91□□□□□ -0.66
SNRPD3-203ENST00000404603 TAF7Q15545 349 aaPredicted RBP10.91□□□□□ -0.66
SNRPD3-203ENST00000404603 WDR63Q8IWG1 891 aa10.91□□□□□ -0.66
SNRPD3-203ENST00000404603 KDM6AO15550 1401 aaPredicted RBP10.91□□□□□ -0.66
SNRPD3-203ENST00000404603 SOS1Q07889 1333 aaPredicted RBP10.9□□□□□ -0.66
SNRPD3-203ENST00000404603 PLSCR1O15162 318 aa10.9□□□□□ -0.66
SNRPD3-203ENST00000404603 PRIM1P49642 420 aaKnown RBP10.9□□□□□ -0.66
SNRPD3-203ENST00000404603 GNAI1P63096 354 aa10.9□□□□□ -0.66
SNRPD3-203ENST00000404603 NEUROD2Q15784 382 aa10.9□□□□□ -0.66
SNRPD3-203ENST00000404603 SLC27A3Q5K4L6 730 aa10.9□□□□□ -0.66
SNRPD3-203ENST00000404603 DCBLD2Q96PD2 775 aa10.9□□□□□ -0.66
SNRPD3-203ENST00000404603 TEX13AQ9BXU3 409 aaPredicted RBP10.9□□□□□ -0.66
SNRPD3-203ENST00000404603 MYH16Q9H6N6 1097 aa10.9□□□□□ -0.66
SNRPD3-203ENST00000404603 BTBD11A6QL63 1104 aa10.89□□□□□ -0.67
SNRPD3-203ENST00000404603 TRIM37O94972 964 aa10.89□□□□□ -0.67
SNRPD3-203ENST00000404603 NFATC2IPQ8NCF5 419 aa10.89□□□□□ -0.67
SNRPD3-203ENST00000404603 IFT57Q9NWB7 429 aa10.89□□□□□ -0.67
SNRPD3-203ENST00000404603 APBA3O96018 575 aa10.88□□□□□ -0.67
SNRPD3-203ENST00000404603 MCM10Q7L590 875 aa10.88□□□□□ -0.67
SNRPD3-203ENST00000404603 VSIG10Q8N0Z9 540 aa10.88□□□□□ -0.67
SNRPD3-203ENST00000404603 IL17REQ8NFR9 667 aa10.88□□□□□ -0.67
SNRPD3-203ENST00000404603 ACSBG1Q96GR2 724 aa10.88□□□□□ -0.67
SNRPD3-203ENST00000404603 CFAP44Q96MT7 982 aa10.88□□□□□ -0.67
SNRPD3-203ENST00000404603 SBF2Q86WG5 1849 aa10.88□□□□□ -0.67
SNRPD3-203ENST00000404603 DLG5Q8TDM6 1919 aa10.88□□□□□ -0.67
SNRPD3-203ENST00000404603 ZNF790Q6PG37 636 aa10.87□□□□□ -0.67
SNRPD3-203ENST00000404603 WWC1Q8IX03 1113 aa10.87□□□□□ -0.67
SNRPD3-203ENST00000404603 PIGBQ92521 554 aa10.87□□□□□ -0.67
SNRPD3-203ENST00000404603 FMNL2Q96PY5 1086 aa10.87□□□□□ -0.67
SNRPD3-203ENST00000404603 TSPYL4Q9UJ04 414 aa10.87□□□□□ -0.67
SNRPD3-203ENST00000404603 RRP7AQ9Y3A4 280 aaKnown RBP10.87□□□□□ -0.67
SNRPD3-203ENST00000404603 PALLDQ8WX93 1383 aa10.87□□□□□ -0.67
SNRPD3-203ENST00000404603 TNS1Q9HBL0 1735 aaKnown RBP10.87□□□□□ -0.67
SNRPD3-203ENST00000404603 TOGARAM1Q9Y4F4 1720 aa10.87□□□□□ -0.67
SNRPD3-203ENST00000404603 ZNF831Q5JPB2 1677 aa10.86□□□□□ -0.67
SNRPD3-203ENST00000404603 E9PSI1 815 aa10.86□□□□□ -0.67
SNRPD3-203ENST00000404603 HOXB7P09629 217 aa10.86□□□□□ -0.67
SNRPD3-203ENST00000404603 HNRNPUQ00839 825 aaKnown RBP eCLIP10.86□□□□□ -0.67
SNRPD3-203ENST00000404603 GOLGA2Q08379 1002 aa10.86□□□□□ -0.67
SNRPD3-203ENST00000404603 LGR6Q9HBX8 967 aa10.86□□□□□ -0.67
SNRPD3-203ENST00000404603 TRIM35Q9UPQ4 493 aa10.86□□□□□ -0.67
SNRPD3-203ENST00000404603 BTAF1O14981 1849 aa10.86□□□□□ -0.67
SNRPD3-203ENST00000404603 ITGB4P16144 1822 aa10.86□□□□□ -0.67
SNRPD3-203ENST00000404603 ZBED9Q6R2W3 1325 aa10.85□□□□□ -0.67
SNRPD3-203ENST00000404603 GALR2O43603 387 aaPredicted RBP10.85□□□□□ -0.67
SNRPD3-203ENST00000404603 STARD3NLO95772 234 aa10.85□□□□□ -0.67
SNRPD3-203ENST00000404603 NPM2Q86SE8 214 aaKnown RBP10.85□□□□□ -0.67
SNRPD3-203ENST00000404603 SIPA1L3O60292 1781 aaPredicted RBP10.85□□□□□ -0.67
SNRPD3-203ENST00000404603 PAPPAQ13219 1627 aa10.84□□□□□ -0.67
SNRPD3-203ENST00000404603 VIRMAQ69YN4 1812 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms