RNA–Protein interactions for RNA: ENST00000403974.6

PMS2CL-202, Transcript of PMS2 C-terminal like pseudogene, humanhuman

BASIC

Gene PMS2CL, Length 1,529 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2CL-202ENST00000403974 SMARCC1Q92922 1105 aaPredicted RBP16.29■□□□□ 0.2
PMS2CL-202ENST00000403974 ASAP1Q9ULH1 1129 aa16.29■□□□□ 0.2
PMS2CL-202ENST00000403974 HTATSF1O43719 755 aaKnown RBP16.29■□□□□ 0.2
PMS2CL-202ENST00000403974 TMPOP42166 694 aaKnown RBP16.29■□□□□ 0.2
PMS2CL-202ENST00000403974 PROM2Q8N271 834 aa16.29■□□□□ 0.2
PMS2CL-202ENST00000403974 ATG3Q9NT62 314 aa16.29■□□□□ 0.2
PMS2CL-202ENST00000403974 PALLDQ8WX93 1383 aa16.28■□□□□ 0.2
PMS2CL-202ENST00000403974 KCNQ4P56696 695 aa16.28■□□□□ 0.2
PMS2CL-202ENST00000403974 SENP3-EIF4A1A0A087X0R7 540 aa16.27■□□□□ 0.2
PMS2CL-202ENST00000403974 APAF1O14727 1248 aa16.27■□□□□ 0.2
PMS2CL-202ENST00000403974 CCNL1Q9UK58 526 aaPredicted RBP16.27■□□□□ 0.2
PMS2CL-202ENST00000403974 RBM42Q9BTD8 480 aaKnown RBP16.26■□□□□ 0.19
PMS2CL-202ENST00000403974 SLC39A6Q13433 755 aa16.25■□□□□ 0.19
PMS2CL-202ENST00000403974 SLC27A3Q5K4L6 730 aa16.25■□□□□ 0.19
PMS2CL-202ENST00000403974 NBPF14Q5TI25 921 aa16.25■□□□□ 0.19
PMS2CL-202ENST00000403974 THUMPD2Q9BTF0 503 aaKnown RBP16.25■□□□□ 0.19
PMS2CL-202ENST00000403974 RGPD3A6NKT7 1758 aaPredicted RBP16.25■□□□□ 0.19
PMS2CL-202ENST00000403974 RGPD4Q7Z3J3 1758 aa16.25■□□□□ 0.19
PMS2CL-202ENST00000403974 PTCD1O75127 700 aaKnown RBP16.24■□□□□ 0.19
PMS2CL-202ENST00000403974 LMOD3Q0VAK6 560 aa16.24■□□□□ 0.19
PMS2CL-202ENST00000403974 CEMIPQ8WUJ3 1361 aa16.24■□□□□ 0.19
PMS2CL-202ENST00000403974 ADAMTS7Q9UKP4 1686 aa16.24■□□□□ 0.19
PMS2CL-202ENST00000403974 LRRC4BQ9NT99 713 aa16.24■□□□□ 0.19
PMS2CL-202ENST00000403974 MRC1P22897 1456 aa16.23■□□□□ 0.19
PMS2CL-202ENST00000403974 RREB1Q92766 1687 aa16.23■□□□□ 0.19
PMS2CL-202ENST00000403974 LOC102724428A0A0B4J2F2 783 aa16.23■□□□□ 0.19
PMS2CL-202ENST00000403974 BTBD11A6QL63 1104 aa16.23■□□□□ 0.19
PMS2CL-202ENST00000403974 SIK1P57059 783 aa16.23■□□□□ 0.19
PMS2CL-202ENST00000403974 TTC5Q8N0Z6 440 aa16.23■□□□□ 0.19
PMS2CL-202ENST00000403974 ATP6V1AP38606 617 aa16.22■□□□□ 0.19
PMS2CL-202ENST00000403974 LY75O60449 1722 aa16.22■□□□□ 0.19
PMS2CL-202ENST00000403974 NUP188Q5SRE5 1749 aa16.22■□□□□ 0.19
PMS2CL-202ENST00000403974 TAF7Q15545 349 aaPredicted RBP16.21■□□□□ 0.19
PMS2CL-202ENST00000403974 NCBP3Q53F19 620 aaKnown RBP16.21■□□□□ 0.19
PMS2CL-202ENST00000403974 NGEFQ8N5V2 710 aa16.21■□□□□ 0.19
PMS2CL-202ENST00000403974 STK32BQ9NY57 414 aa16.21■□□□□ 0.19
PMS2CL-202ENST00000403974 MIS18AQ9NYP9 233 aa16.21■□□□□ 0.19
PMS2CL-202ENST00000403974 PSDA5PKW4 1024 aaPredicted RBP16.2■□□□□ 0.18
PMS2CL-202ENST00000403974 HNRNPUQ00839 825 aaKnown RBP eCLIP16.2■□□□□ 0.18
PMS2CL-202ENST00000403974 R3HDM1Q15032 1099 aaKnown RBP16.2■□□□□ 0.18
PMS2CL-202ENST00000403974 TRIM35Q9UPQ4 493 aa16.2■□□□□ 0.18
PMS2CL-202ENST00000403974 SALL2Q9Y467 1007 aaPredicted RBP16.2■□□□□ 0.18
PMS2CL-202ENST00000403974 ZNF790Q6PG37 636 aa16.19■□□□□ 0.18
PMS2CL-202ENST00000403974 ANO8Q9HCE9 1232 aaPredicted RBP16.19■□□□□ 0.18
PMS2CL-202ENST00000403974 LAS1LQ9Y4W2 734 aaKnown RBP16.19■□□□□ 0.18
PMS2CL-202ENST00000403974 KCNQ3O43525 872 aa16.19■□□□□ 0.18
PMS2CL-202ENST00000403974 SIPA1L3O60292 1781 aaPredicted RBP16.18■□□□□ 0.18
PMS2CL-202ENST00000403974 ITPK1Q13572 414 aa16.18■□□□□ 0.18
PMS2CL-202ENST00000403974 SLC4A9Q96Q91 983 aa16.18■□□□□ 0.18
PMS2CL-202ENST00000403974 HMGB2P26583 209 aaKnown RBP16.17■□□□□ 0.18
PMS2CL-202ENST00000403974 SLC15A2Q16348 729 aa16.17■□□□□ 0.18
PMS2CL-202ENST00000403974 ZNF827Q17R98 1081 aa16.17■□□□□ 0.18
PMS2CL-202ENST00000403974 CCDC27Q2M243 656 aa16.17■□□□□ 0.18
PMS2CL-202ENST00000403974 LINC00116Q8NCU8 138 aa16.17■□□□□ 0.18
PMS2CL-202ENST00000403974 ZNF496Q96IT1 587 aaPredicted RBP16.16■□□□□ 0.18
PMS2CL-202ENST00000403974 FMNL2Q96PY5 1086 aa16.16■□□□□ 0.18
PMS2CL-202ENST00000403974 TFCP2L1Q9NZI6 479 aa16.16■□□□□ 0.18
PMS2CL-202ENST00000403974 TSPYL4Q9UJ04 414 aa16.16■□□□□ 0.18
PMS2CL-202ENST00000403974 PAPPAQ13219 1627 aa16.16■□□□□ 0.18
PMS2CL-202ENST00000403974 ZBED9Q6R2W3 1325 aa16.15■□□□□ 0.18
PMS2CL-202ENST00000403974 DNAJC10Q8IXB1 793 aa16.15■□□□□ 0.18
PMS2CL-202ENST00000403974 AK7Q96M32 723 aa16.15■□□□□ 0.18
PMS2CL-202ENST00000403974 C5P01031 1676 aa16.15■□□□□ 0.18
PMS2CL-202ENST00000403974 AKT1S1Q96B36 256 aa16.14■□□□□ 0.18
PMS2CL-202ENST00000403974 YTHDC1Q96MU7 727 aaKnown RBP16.14■□□□□ 0.18
PMS2CL-202ENST00000403974 KCPQ6ZWJ8 1503 aa16.14■□□□□ 0.17
PMS2CL-202ENST00000403974 CALD1Q05682 793 aaKnown RBP16.14■□□□□ 0.17
PMS2CL-202ENST00000403974 ZNF521Q96K83 1311 aa16.13■□□□□ 0.17
PMS2CL-202ENST00000403974 WWC1Q8IX03 1113 aa16.13■□□□□ 0.17
PMS2CL-202ENST00000403974 HEG1Q9ULI3 1381 aa16.13■□□□□ 0.17
PMS2CL-202ENST00000403974 TAF1LQ8IZX4 1826 aa16.12■□□□□ 0.17
PMS2CL-202ENST00000403974 GNPATO15228 680 aa16.12■□□□□ 0.17
PMS2CL-202ENST00000403974 MSH5O43196 834 aa16.12■□□□□ 0.17
PMS2CL-202ENST00000403974 PHF14O94880 888 aa16.12■□□□□ 0.17
PMS2CL-202ENST00000403974 VSIG10Q8N0Z9 540 aa16.12■□□□□ 0.17
PMS2CL-202ENST00000403974 C4BP0C0L5 1744 aa16.12■□□□□ 0.17
PMS2CL-202ENST00000403974 UBR2Q8IWV8 1755 aa16.11■□□□□ 0.17
PMS2CL-202ENST00000403974 BABAM1Q9NWV8 329 aa16.11■□□□□ 0.17
PMS2CL-202ENST00000403974 KDM3BQ7LBC6 1761 aa16.11■□□□□ 0.17
PMS2CL-202ENST00000403974 STARD3NLO95772 234 aa16.1■□□□□ 0.17
PMS2CL-202ENST00000403974 SNRPA1P09661 255 aaKnown RBP16.1■□□□□ 0.17
PMS2CL-202ENST00000403974 CRKLP46109 303 aaKnown RBP16.1■□□□□ 0.17
PMS2CL-202ENST00000403974 EIF4A1P60842 406 aaKnown RBP16.1■□□□□ 0.17
PMS2CL-202ENST00000403974 SMIM5Q71RC9 77 aa16.1■□□□□ 0.17
PMS2CL-202ENST00000403974 TEX13AQ9BXU3 409 aaPredicted RBP16.1■□□□□ 0.17
PMS2CL-202ENST00000403974 TJP1Q07157 1748 aa16.1■□□□□ 0.17
PMS2CL-202ENST00000403974 ZNF831Q5JPB2 1677 aa16.09■□□□□ 0.17
PMS2CL-202ENST00000403974 CHL1O00533 1208 aa16.09■□□□□ 0.17
PMS2CL-202ENST00000403974 CYP19A1P11511 503 aaPredicted RBP16.09■□□□□ 0.17
PMS2CL-202ENST00000403974 GNAI1P63096 354 aa16.09■□□□□ 0.17
PMS2CL-202ENST00000403974 RC3H1Q5TC82 1133 aaKnown RBP16.09■□□□□ 0.17
PMS2CL-202ENST00000403974 CFAP44Q96MT7 982 aa16.09■□□□□ 0.17
PMS2CL-202ENST00000403974 PDGFDQ9GZP0 370 aaPredicted RBP16.09■□□□□ 0.17
PMS2CL-202ENST00000403974 PRAMEF22A3QJZ6 481 aa16.09■□□□□ 0.17
PMS2CL-202ENST00000403974 WDR63Q8IWG1 891 aa16.09■□□□□ 0.17
PMS2CL-202ENST00000403974 CCDC87Q9NVE4 849 aa16.09■□□□□ 0.17
PMS2CL-202ENST00000403974 IFT57Q9NWB7 429 aa16.09■□□□□ 0.17
PMS2CL-202ENST00000403974 RTCBQ9Y3I0 505 aaKnown RBP16.09■□□□□ 0.17
PMS2CL-202ENST00000403974 IL16Q14005 1332 aa16.08■□□□□ 0.17
PMS2CL-202ENST00000403974 CNTNAP4Q9C0A0 1308 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms