RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 TSPOAP1O95153 1857 aa14.63□□□□□ -0.07
RBM39-206ENST00000403542 EIF2S2P20042 333 aaKnown RBP14.63□□□□□ -0.07
RBM39-206ENST00000403542 MX1P20591 662 aa14.63□□□□□ -0.07
RBM39-206ENST00000403542 FLIIQ13045 1269 aa14.63□□□□□ -0.07
RBM39-206ENST00000403542 EYA1Q99502 592 aa14.63□□□□□ -0.07
RBM39-206ENST00000403542 LRRCC1Q9C099 1032 aa14.63□□□□□ -0.07
RBM39-206ENST00000403542 ZSCAN30Q86W11 494 aa14.62□□□□□ -0.07
RBM39-206ENST00000403542 ESYT1Q9BSJ8 1104 aa14.61□□□□□ -0.07
RBM39-206ENST00000403542 ANXA1P04083 346 aa14.61□□□□□ -0.07
RBM39-206ENST00000403542 HAP1P54257 671 aaPredicted RBP14.61□□□□□ -0.07
RBM39-206ENST00000403542 DDX54Q8TDD1 881 aaKnown RBP14.6□□□□□ -0.07
RBM39-206ENST00000403542 RBM33Q96EV2 1170 aaKnown RBP14.6□□□□□ -0.07
RBM39-206ENST00000403542 PHAXQ9H814 394 aaKnown RBP14.6□□□□□ -0.07
RBM39-206ENST00000403542 CWC22Q9HCG8 908 aaKnown RBP14.6□□□□□ -0.07
RBM39-206ENST00000403542 R3HCC1Q9Y3T6 440 aaKnown RBP14.6□□□□□ -0.07
RBM39-206ENST00000403542 LTKP29376 864 aa14.6□□□□□ -0.07
RBM39-206ENST00000403542 CCT4P50991 539 aaKnown RBP14.6□□□□□ -0.07
RBM39-206ENST00000403542 CLEC17AQ6ZS10 378 aa14.6□□□□□ -0.07
RBM39-206ENST00000403542 PPP1R9BQ96SB3 815 aa14.6□□□□□ -0.07
RBM39-206ENST00000403542 VSIG10Q8N0Z9 540 aa14.59□□□□□ -0.07
RBM39-206ENST00000403542 GADD45BO75293 160 aaPredicted RBP14.59□□□□□ -0.07
RBM39-206ENST00000403542 CPA1P15085 419 aa14.59□□□□□ -0.07
RBM39-206ENST00000403542 NLRP6P59044 892 aa14.59□□□□□ -0.07
RBM39-206ENST00000403542 ZNF445P59923 1031 aa14.59□□□□□ -0.07
RBM39-206ENST00000403542 CRB1P82279 1406 aa14.59□□□□□ -0.07
RBM39-206ENST00000403542 CHMLP26374 656 aa14.59□□□□□ -0.07
RBM39-206ENST00000403542 SURF6O75683 361 aaKnown RBP14.58□□□□□ -0.08
RBM39-206ENST00000403542 KIF24Q5T7B8 1368 aa14.57□□□□□ -0.08
RBM39-206ENST00000403542 DLC1Q96QB1 1528 aa14.57□□□□□ -0.08
RBM39-206ENST00000403542 KIAA0232Q92628 1395 aa14.57□□□□□ -0.08
RBM39-206ENST00000403542 RIMS1Q86UR5 1692 aaKnown RBP14.57□□□□□ -0.08
RBM39-206ENST00000403542 RIMBP3CA6NJZ7 1639 aa14.57□□□□□ -0.08
RBM39-206ENST00000403542 RIMBP3BA6NNM3 1639 aa14.57□□□□□ -0.08
RBM39-206ENST00000403542 RIMBP3Q9UFD9 1639 aa14.57□□□□□ -0.08
RBM39-206ENST00000403542 UBTFL1P0CB47 393 aaPredicted RBP14.56□□□□□ -0.08
RBM39-206ENST00000403542 MCCP23508 829 aa14.56□□□□□ -0.08
RBM39-206ENST00000403542 SPG7Q9UQ90 795 aa14.56□□□□□ -0.08
RBM39-206ENST00000403542 PTMAP06454 111 aaKnown RBP14.56□□□□□ -0.08
RBM39-206ENST00000403542 PLCB2Q00722 1185 aa14.56□□□□□ -0.08
RBM39-206ENST00000403542 CCDC30Q5VVM6 783 aa14.55□□□□□ -0.08
RBM39-206ENST00000403542 IL17REQ8NFR9 667 aa14.55□□□□□ -0.08
RBM39-206ENST00000403542 ZNF830Q96NB3 372 aaPredicted RBP14.55□□□□□ -0.08
RBM39-206ENST00000403542 USP44Q9H0E7 712 aa14.55□□□□□ -0.08
RBM39-206ENST00000403542 FAM13BQ9NYF5 915 aa14.55□□□□□ -0.08
RBM39-206ENST00000403542 HDGFL1Q5TGJ6 251 aa14.55□□□□□ -0.08
RBM39-206ENST00000403542 LRSAM1Q6UWE0 723 aa14.55□□□□□ -0.08
RBM39-206ENST00000403542 CWC27Q6UX04 472 aaKnown RBP14.55□□□□□ -0.08
RBM39-206ENST00000403542 PPP1R42Q7Z4L9 355 aa14.55□□□□□ -0.08
RBM39-206ENST00000403542 GNAI3P08754 354 aa14.54□□□□□ -0.08
RBM39-206ENST00000403542 HDGFP51858 240 aaKnown RBP14.54□□□□□ -0.08
RBM39-206ENST00000403542 ATP8B2P98198 1209 aa14.54□□□□□ -0.08
RBM39-206ENST00000403542 AMOTL2Q9Y2J4 779 aa14.54□□□□□ -0.08
RBM39-206ENST00000403542 SRGAP3O43295 1099 aa14.54□□□□□ -0.08
RBM39-206ENST00000403542 OSBPL3Q9H4L5 887 aa14.54□□□□□ -0.08
RBM39-206ENST00000403542 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.54□□□□□ -0.08
RBM39-206ENST00000403542 GNAT3A8MTJ3 354 aa14.53□□□□□ -0.08
RBM39-206ENST00000403542 NBPF7P0C2Y1 421 aaPredicted RBP14.53□□□□□ -0.08
RBM39-206ENST00000403542 USP6P35125 1406 aa14.53□□□□□ -0.08
RBM39-206ENST00000403542 BRD1O95696 1058 aa14.53□□□□□ -0.08
RBM39-206ENST00000403542 OS9Q13438 667 aaPredicted RBP14.52□□□□□ -0.08
RBM39-206ENST00000403542 USP48Q86UV5 1035 aa14.52□□□□□ -0.08
RBM39-206ENST00000403542 KCNQ3O43525 872 aa14.52□□□□□ -0.09
RBM39-206ENST00000403542 IBTKQ9P2D0 1353 aaPredicted RBP14.52□□□□□ -0.09
RBM39-206ENST00000403542 PLEKHG3A1L390 1219 aa14.52□□□□□ -0.09
RBM39-206ENST00000403542 CNPY2Q9Y2B0 182 aa14.52□□□□□ -0.09
RBM39-206ENST00000403542 CHMP3Q9Y3E7 222 aa14.52□□□□□ -0.09
RBM39-206ENST00000403542 OVOS2A0A0J9YW53 1432 aa14.51□□□□□ -0.09
RBM39-206ENST00000403542 OVOS2Q6IE36 1432 aa14.51□□□□□ -0.09
RBM39-206ENST00000403542 SALL3Q9BXA9 1300 aa14.51□□□□□ -0.09
RBM39-206ENST00000403542 NRXN3Q9Y4C0 1643 aa14.51□□□□□ -0.09
RBM39-206ENST00000403542 OFD1O75665 1012 aa14.51□□□□□ -0.09
RBM39-206ENST00000403542 RASEFQ8IZ41 740 aa14.51□□□□□ -0.09
RBM39-206ENST00000403542 ABTB2Q8N961 1025 aa14.51□□□□□ -0.09
RBM39-206ENST00000403542 CEP170BQ9Y4F5 1589 aaPredicted RBP14.51□□□□□ -0.09
RBM39-206ENST00000403542 FIBPO43427 364 aa14.51□□□□□ -0.09
RBM39-206ENST00000403542 RRP9O43818 475 aaKnown RBP14.51□□□□□ -0.09
RBM39-206ENST00000403542 PEAK1Q9H792 1746 aa14.5□□□□□ -0.09
RBM39-206ENST00000403542 TAF7Q15545 349 aaPredicted RBP14.5□□□□□ -0.09
RBM39-206ENST00000403542 C17orf53Q8N3J3 647 aaPredicted RBP14.5□□□□□ -0.09
RBM39-206ENST00000403542 JARID2Q92833 1246 aaPredicted RBP14.5□□□□□ -0.09
RBM39-206ENST00000403542 LGR6Q9HBX8 967 aa14.5□□□□□ -0.09
RBM39-206ENST00000403542 SOS1Q07889 1333 aaPredicted RBP14.5□□□□□ -0.09
RBM39-206ENST00000403542 NOL7Q9UMY1 257 aaKnown RBP14.5□□□□□ -0.09
RBM39-206ENST00000403542 FLT4P35916 1363 aa14.5□□□□□ -0.09
RBM39-206ENST00000403542 TNRQ92752 1358 aa14.5□□□□□ -0.09
RBM39-206ENST00000403542 TMEM2Q9UHN6 1383 aa14.5□□□□□ -0.09
RBM39-206ENST00000403542 PI4KAP2A4QPH2 592 aa14.49□□□□□ -0.09
RBM39-206ENST00000403542 PI4KAP1Q8N8J0 262 aa14.49□□□□□ -0.09
RBM39-206ENST00000403542 SRCIN1Q9C0H9 1055 aa14.49□□□□□ -0.09
RBM39-206ENST00000403542 CHPF2Q9P2E5 772 aa14.49□□□□□ -0.09
RBM39-206ENST00000403542 SETD1AO15047 1707 aaKnown RBP14.49□□□□□ -0.09
RBM39-206ENST00000403542 TSPY26PQ9H489 355 aa14.49□□□□□ -0.09
RBM39-206ENST00000403542 C3P01024 1663 aa14.49□□□□□ -0.09
RBM39-206ENST00000403542 RHPN1Q8TCX5 695 aa14.48□□□□□ -0.09
RBM39-206ENST00000403542 PDLIM2Q96JY6 352 aa14.48□□□□□ -0.09
RBM39-206ENST00000403542 USP25Q9UHP3 1055 aa14.48□□□□□ -0.09
RBM39-206ENST00000403542 PA2G4Q9UQ80 394 aaKnown RBP14.48□□□□□ -0.09
RBM39-206ENST00000403542 HOXC9P31274 260 aa14.48□□□□□ -0.09
RBM39-206ENST00000403542 CUL4AQ13619 759 aa14.48□□□□□ -0.09
RBM39-206ENST00000403542 GLIPR1L2Q4G1C9 344 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms