RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 TEFQ10587 303 aa22.67■■□□□ 1.22
PTCHD3P3-201ENST00000403073 KCNQ4P56696 695 aa22.66■■□□□ 1.22
PTCHD3P3-201ENST00000403073 SMARCC1Q92922 1105 aaPredicted RBP22.66■■□□□ 1.22
PTCHD3P3-201ENST00000403073 THUMPD2Q9BTF0 503 aaKnown RBP22.66■■□□□ 1.22
PTCHD3P3-201ENST00000403073 CEMIPQ8WUJ3 1361 aa22.65■■□□□ 1.22
PTCHD3P3-201ENST00000403073 PALLDQ8WX93 1383 aa22.65■■□□□ 1.22
PTCHD3P3-201ENST00000403073 BTAF1O14981 1849 aa22.65■■□□□ 1.22
PTCHD3P3-201ENST00000403073 LRRC4BQ9NT99 713 aa22.64■■□□□ 1.21
PTCHD3P3-201ENST00000403073 SLC39A6Q13433 755 aa22.63■■□□□ 1.21
PTCHD3P3-201ENST00000403073 TRIM35Q9UPQ4 493 aa22.63■■□□□ 1.21
PTCHD3P3-201ENST00000403073 ADAMTS7Q9UKP4 1686 aa22.62■■□□□ 1.21
PTCHD3P3-201ENST00000403073 CCNL1Q9UK58 526 aaPredicted RBP22.62■■□□□ 1.21
PTCHD3P3-201ENST00000403073 ITGB4P16144 1822 aa22.61■■□□□ 1.21
PTCHD3P3-201ENST00000403073 MRC1P22897 1456 aa22.61■■□□□ 1.21
PTCHD3P3-201ENST00000403073 SCN11AQ9UI33 1791 aa22.61■■□□□ 1.21
PTCHD3P3-201ENST00000403073 PTCD1O75127 700 aaKnown RBP22.6■■□□□ 1.21
PTCHD3P3-201ENST00000403073 LMOD3Q0VAK6 560 aa22.6■■□□□ 1.21
PTCHD3P3-201ENST00000403073 SLC27A3Q5K4L6 730 aa22.6■■□□□ 1.21
PTCHD3P3-201ENST00000403073 RBM42Q9BTD8 480 aaKnown RBP22.6■■□□□ 1.21
PTCHD3P3-201ENST00000403073 KAT6BQ8WYB5 2073 aa22.6■■□□□ 1.21
PTCHD3P3-201ENST00000403073 LOC102724428A0A0B4J2F2 783 aa22.59■■□□□ 1.21
PTCHD3P3-201ENST00000403073 BTBD11A6QL63 1104 aa22.59■■□□□ 1.21
PTCHD3P3-201ENST00000403073 SIK1P57059 783 aa22.59■■□□□ 1.21
PTCHD3P3-201ENST00000403073 MIS18AQ9NYP9 233 aa22.59■■□□□ 1.21
PTCHD3P3-201ENST00000403073 TAF7Q15545 349 aaPredicted RBP22.58■■□□□ 1.21
PTCHD3P3-201ENST00000403073 SLC4A9Q96Q91 983 aa22.58■■□□□ 1.21
PTCHD3P3-201ENST00000403073 KCNQ3O43525 872 aa22.57■■□□□ 1.2
PTCHD3P3-201ENST00000403073 ATP6V1AP38606 617 aa22.57■■□□□ 1.2
PTCHD3P3-201ENST00000403073 NBPF14Q5TI25 921 aa22.56■■□□□ 1.2
PTCHD3P3-201ENST00000403073 ZNF790Q6PG37 636 aa22.56■■□□□ 1.2
PTCHD3P3-201ENST00000403073 ITPK1Q13572 414 aa22.55■■□□□ 1.2
PTCHD3P3-201ENST00000403073 TTC5Q8N0Z6 440 aa22.55■■□□□ 1.2
PTCHD3P3-201ENST00000403073 SALL2Q9Y467 1007 aaPredicted RBP22.55■■□□□ 1.2
PTCHD3P3-201ENST00000403073 RGPD3A6NKT7 1758 aaPredicted RBP22.54■■□□□ 1.2
PTCHD3P3-201ENST00000403073 RGPD4Q7Z3J3 1758 aa22.54■■□□□ 1.2
PTCHD3P3-201ENST00000403073 ANO8Q9HCE9 1232 aaPredicted RBP22.54■■□□□ 1.2
PTCHD3P3-201ENST00000403073 RREB1Q92766 1687 aa22.52■■□□□ 1.2
PTCHD3P3-201ENST00000403073 LINC00116Q8NCU8 138 aa22.52■■□□□ 1.2
PTCHD3P3-201ENST00000403073 ZNF496Q96IT1 587 aaPredicted RBP22.52■■□□□ 1.2
PTCHD3P3-201ENST00000403073 STK32BQ9NY57 414 aa22.52■■□□□ 1.2
PTCHD3P3-201ENST00000403073 DLG5Q8TDM6 1919 aa22.51■■□□□ 1.19
PTCHD3P3-201ENST00000403073 PSDA5PKW4 1024 aaPredicted RBP22.51■■□□□ 1.19
PTCHD3P3-201ENST00000403073 R3HDM1Q15032 1099 aaKnown RBP22.51■■□□□ 1.19
PTCHD3P3-201ENST00000403073 ZNF827Q17R98 1081 aa22.51■■□□□ 1.19
PTCHD3P3-201ENST00000403073 LAS1LQ9Y4W2 734 aaKnown RBP22.51■■□□□ 1.19
PTCHD3P3-201ENST00000403073 LY75O60449 1722 aa22.51■■□□□ 1.19
PTCHD3P3-201ENST00000403073 SLC15A2Q16348 729 aa22.5■■□□□ 1.19
PTCHD3P3-201ENST00000403073 AKT1S1Q96B36 256 aa22.5■■□□□ 1.19
PTCHD3P3-201ENST00000403073 NUP188Q5SRE5 1749 aa22.5■■□□□ 1.19
PTCHD3P3-201ENST00000403073 CCDC27Q2M243 656 aa22.49■■□□□ 1.19
PTCHD3P3-201ENST00000403073 WWC1Q8IX03 1113 aa22.49■■□□□ 1.19
PTCHD3P3-201ENST00000403073 DNAJC10Q8IXB1 793 aa22.49■■□□□ 1.19
PTCHD3P3-201ENST00000403073 FMNL2Q96PY5 1086 aa22.49■■□□□ 1.19
PTCHD3P3-201ENST00000403073 TSPYL4Q9UJ04 414 aa22.49■■□□□ 1.19
PTCHD3P3-201ENST00000403073 KCPQ6ZWJ8 1503 aa22.48■■□□□ 1.19
PTCHD3P3-201ENST00000403073 CHL1O00533 1208 aa22.47■■□□□ 1.19
PTCHD3P3-201ENST00000403073 NCBP3Q53F19 620 aaKnown RBP22.47■■□□□ 1.19
PTCHD3P3-201ENST00000403073 VSIG10Q8N0Z9 540 aa22.47■■□□□ 1.19
PTCHD3P3-201ENST00000403073 SIPA1L3O60292 1781 aaPredicted RBP22.47■■□□□ 1.19
PTCHD3P3-201ENST00000403073 VIRMAQ69YN4 1812 aaKnown RBP22.47■■□□□ 1.19
PTCHD3P3-201ENST00000403073 PAPPAQ13219 1627 aa22.46■■□□□ 1.19
PTCHD3P3-201ENST00000403073 TFCP2L1Q9NZI6 479 aa22.46■■□□□ 1.19
PTCHD3P3-201ENST00000403073 HEG1Q9ULI3 1381 aa22.46■■□□□ 1.19
PTCHD3P3-201ENST00000403073 HMGB2P26583 209 aaKnown RBP22.45■■□□□ 1.18
PTCHD3P3-201ENST00000403073 EIF4A1P60842 406 aaKnown RBP22.45■■□□□ 1.18
PTCHD3P3-201ENST00000403073 CALD1Q05682 793 aaKnown RBP22.45■■□□□ 1.18
PTCHD3P3-201ENST00000403073 BABAM1Q9NWV8 329 aa22.45■■□□□ 1.18
PTCHD3P3-201ENST00000403073 PRAMEF22A3QJZ6 481 aa22.44■■□□□ 1.18
PTCHD3P3-201ENST00000403073 SMIM5Q71RC9 77 aa22.44■■□□□ 1.18
PTCHD3P3-201ENST00000403073 AK7Q96M32 723 aa22.44■■□□□ 1.18
PTCHD3P3-201ENST00000403073 CFAP44Q96MT7 982 aa22.44■■□□□ 1.18
PTCHD3P3-201ENST00000403073 ZNF853P0CG23 659 aa22.43■■□□□ 1.18
PTCHD3P3-201ENST00000403073 CYP19A1P11511 503 aaPredicted RBP22.43■■□□□ 1.18
PTCHD3P3-201ENST00000403073 CRKLP46109 303 aaKnown RBP22.42■■□□□ 1.18
PTCHD3P3-201ENST00000403073 AMIGO3Q86WK7 504 aa22.42■■□□□ 1.18
PTCHD3P3-201ENST00000403073 PDGFDQ9GZP0 370 aaPredicted RBP22.42■■□□□ 1.18
PTCHD3P3-201ENST00000403073 MBIPQ9NS73 344 aa22.42■■□□□ 1.18
PTCHD3P3-201ENST00000403073 IFT57Q9NWB7 429 aa22.42■■□□□ 1.18
PTCHD3P3-201ENST00000403073 SNRPA1P09661 255 aaKnown RBP22.41■■□□□ 1.18
PTCHD3P3-201ENST00000403073 GNAI1P63096 354 aa22.41■■□□□ 1.18
PTCHD3P3-201ENST00000403073 RC3H1Q5TC82 1133 aaKnown RBP22.41■■□□□ 1.18
PTCHD3P3-201ENST00000403073 INTS5Q6P9B9 1019 aaKnown RBP22.41■■□□□ 1.18
PTCHD3P3-201ENST00000403073 NGEFQ8N5V2 710 aa22.41■■□□□ 1.18
PTCHD3P3-201ENST00000403073 TEX13AQ9BXU3 409 aaPredicted RBP22.41■■□□□ 1.18
PTCHD3P3-201ENST00000403073 USP16Q9Y5T5 823 aa22.41■■□□□ 1.18
PTCHD3P3-201ENST00000403073 CNTNAP4Q9C0A0 1308 aa22.4■■□□□ 1.18
PTCHD3P3-201ENST00000403073 GNPATO15228 680 aa22.4■■□□□ 1.18
PTCHD3P3-201ENST00000403073 PNPLA7Q6ZV29 1317 aa22.39■■□□□ 1.18
PTCHD3P3-201ENST00000403073 GIGYF1O75420 1035 aaPredicted RBP22.39■■□□□ 1.17
PTCHD3P3-201ENST00000403073 STARD3NLO95772 234 aa22.39■■□□□ 1.17
PTCHD3P3-201ENST00000403073 WDR63Q8IWG1 891 aa22.39■■□□□ 1.17
PTCHD3P3-201ENST00000403073 C5P01031 1676 aa22.39■■□□□ 1.17
PTCHD3P3-201ENST00000403073 UBR2Q8IWV8 1755 aa22.38■■□□□ 1.17
PTCHD3P3-201ENST00000403073 C4BP0C0L5 1744 aa22.38■■□□□ 1.17
PTCHD3P3-201ENST00000403073 PHF14O94880 888 aa22.38■■□□□ 1.17
PTCHD3P3-201ENST00000403073 KRT24Q2M2I5 525 aa22.38■■□□□ 1.17
PTCHD3P3-201ENST00000403073 COL23A1Q86Y22 540 aaPredicted RBP22.38■■□□□ 1.17
PTCHD3P3-201ENST00000403073 CCDC87Q9NVE4 849 aa22.38■■□□□ 1.17
PTCHD3P3-201ENST00000403073 ZNF831Q5JPB2 1677 aa22.38■■□□□ 1.17
PTCHD3P3-201ENST00000403073 RPS6KA4O75676 772 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms