RNA–Protein interactions for RNA: ENST00000401787.7

KDM4C-203, Transcript of lysine demethylase 4C, humanhuman

TSL 1 (best) BASIC

Gene KDM4C, Length 1,406 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4C-203ENST00000401787 HNRNPUQ00839 825 aaKnown RBP eCLIP32.58■■■□□ 2.81
KDM4C-203ENST00000401787 MRC1P22897 1456 aa32.58■■■□□ 2.81
KDM4C-203ENST00000401787 CCDC27Q2M243 656 aa32.57■■■□□ 2.8
KDM4C-203ENST00000401787 CALD1Q05682 793 aaKnown RBP32.56■■■□□ 2.8
KDM4C-203ENST00000401787 WWC1Q8IX03 1113 aa32.56■■■□□ 2.8
KDM4C-203ENST00000401787 LAS1LQ9Y4W2 734 aaKnown RBP32.56■■■□□ 2.8
KDM4C-203ENST00000401787 BTBD11A6QL63 1104 aa32.55■■■□□ 2.8
KDM4C-203ENST00000401787 TAF7Q15545 349 aaPredicted RBP32.55■■■□□ 2.8
KDM4C-203ENST00000401787 NCBP3Q53F19 620 aaKnown RBP32.55■■■□□ 2.8
KDM4C-203ENST00000401787 CCDC125Q86Z20 511 aa32.55■■■□□ 2.8
KDM4C-203ENST00000401787 TNS1Q9HBL0 1735 aaKnown RBP32.54■■■□□ 2.8
KDM4C-203ENST00000401787 UPF1Q92900 1129 aaKnown RBP eCLIP32.53■■■□□ 2.8
KDM4C-203ENST00000401787 ASAP1Q9ULH1 1129 aa32.52■■■□□ 2.8
KDM4C-203ENST00000401787 SIPA1L3O60292 1781 aaPredicted RBP32.52■■■□□ 2.8
KDM4C-203ENST00000401787 SMARCC1Q92922 1105 aaPredicted RBP32.51■■■□□ 2.8
KDM4C-203ENST00000401787 BAG6P46379 1132 aa32.51■■■□□ 2.79
KDM4C-203ENST00000401787 SLC39A6Q13433 755 aa32.51■■■□□ 2.79
KDM4C-203ENST00000401787 TTC5Q8N0Z6 440 aa32.51■■■□□ 2.79
KDM4C-203ENST00000401787 MIS18AQ9NYP9 233 aa32.51■■■□□ 2.79
KDM4C-203ENST00000401787 ATG3Q9NT62 314 aa32.5■■■□□ 2.79
KDM4C-203ENST00000401787 PALLDQ8WX93 1383 aa32.48■■■□□ 2.79
KDM4C-203ENST00000401787 TSPYL4Q9UJ04 414 aa32.48■■■□□ 2.79
KDM4C-203ENST00000401787 RBM42Q9BTD8 480 aaKnown RBP32.46■■■□□ 2.79
KDM4C-203ENST00000401787 PTCD1O75127 700 aaKnown RBP32.45■■■□□ 2.79
KDM4C-203ENST00000401787 ZNF790Q6PG37 636 aa32.45■■■□□ 2.79
KDM4C-203ENST00000401787 WDR63Q8IWG1 891 aa32.45■■■□□ 2.79
KDM4C-203ENST00000401787 GNAI1P63096 354 aa32.44■■■□□ 2.78
KDM4C-203ENST00000401787 EN1Q05925 392 aaPredicted RBP32.44■■■□□ 2.78
KDM4C-203ENST00000401787 DEFB132Q7Z7B7 95 aa32.44■■■□□ 2.78
KDM4C-203ENST00000401787 PLSCR1O15162 318 aa32.43■■■□□ 2.78
KDM4C-203ENST00000401787 IFT57Q9NWB7 429 aa32.43■■■□□ 2.78
KDM4C-203ENST00000401787 CFAP44Q96MT7 982 aa32.43■■■□□ 2.78
KDM4C-203ENST00000401787 YTHDC1Q96MU7 727 aaKnown RBP32.43■■■□□ 2.78
KDM4C-203ENST00000401787 KCNQ3O43525 872 aa32.42■■■□□ 2.78
KDM4C-203ENST00000401787 PAPPAQ13219 1627 aa32.41■■■□□ 2.78
KDM4C-203ENST00000401787 BABAM1Q9NWV8 329 aa32.41■■■□□ 2.78
KDM4C-203ENST00000401787 IL16Q14005 1332 aa32.41■■■□□ 2.78
KDM4C-203ENST00000401787 CHL1O00533 1208 aa32.39■■■□□ 2.78
KDM4C-203ENST00000401787 GOLGA2Q08379 1002 aa32.39■■■□□ 2.78
KDM4C-203ENST00000401787 CCNL1Q9UK58 526 aaPredicted RBP32.39■■■□□ 2.78
KDM4C-203ENST00000401787 KDM3BQ7LBC6 1761 aa32.39■■■□□ 2.77
KDM4C-203ENST00000401787 ZNF521Q96K83 1311 aa32.38■■■□□ 2.77
KDM4C-203ENST00000401787 LOC102724428A0A0B4J2F2 783 aa32.38■■■□□ 2.77
KDM4C-203ENST00000401787 SIK1P57059 783 aa32.38■■■□□ 2.77
KDM4C-203ENST00000401787 EZH2Q15910 746 aaKnown RBP32.38■■■□□ 2.77
KDM4C-203ENST00000401787 FMNL2Q96PY5 1086 aa32.38■■■□□ 2.77
KDM4C-203ENST00000401787 TXNRD1Q16881 649 aa32.37■■■□□ 2.77
KDM4C-203ENST00000401787 MBIPQ9NS73 344 aa32.37■■■□□ 2.77
KDM4C-203ENST00000401787 LY75O60449 1722 aa32.37■■■□□ 2.77
KDM4C-203ENST00000401787 ATP6V1AP38606 617 aa32.36■■■□□ 2.77
KDM4C-203ENST00000401787 ZNF496Q96IT1 587 aaPredicted RBP32.36■■■□□ 2.77
KDM4C-203ENST00000401787 ZNF853P0CG23 659 aa32.35■■■□□ 2.77
KDM4C-203ENST00000401787 KCNQ4P56696 695 aa32.35■■■□□ 2.77
KDM4C-203ENST00000401787 CAMKK2Q96RR4 588 aa32.35■■■□□ 2.77
KDM4C-203ENST00000401787 RGPD3A6NKT7 1758 aaPredicted RBP32.35■■■□□ 2.77
KDM4C-203ENST00000401787 RGPD4Q7Z3J3 1758 aa32.35■■■□□ 2.77
KDM4C-203ENST00000401787 TSR2Q969E8 191 aaKnown RBP32.34■■■□□ 2.77
KDM4C-203ENST00000401787 MYH16Q9H6N6 1097 aa32.34■■■□□ 2.77
KDM4C-203ENST00000401787 UBR2Q8IWV8 1755 aa32.34■■■□□ 2.77
KDM4C-203ENST00000401787 KCPQ6ZWJ8 1503 aa32.34■■■□□ 2.77
KDM4C-203ENST00000401787 SLC27A3Q5K4L6 730 aa32.34■■■□□ 2.77
KDM4C-203ENST00000401787 ZBED9Q6R2W3 1325 aa32.33■■■□□ 2.77
KDM4C-203ENST00000401787 SOCS7O14512 581 aa32.31■■■□□ 2.76
KDM4C-203ENST00000401787 EIF4A1P60842 406 aaKnown RBP32.31■■■□□ 2.76
KDM4C-203ENST00000401787 SPINK5Q9NQ38 1064 aaPredicted RBP32.31■■■□□ 2.76
KDM4C-203ENST00000401787 HEG1Q9ULI3 1381 aa32.31■■■□□ 2.76
KDM4C-203ENST00000401787 E9PSI1 815 aa32.3■■■□□ 2.76
KDM4C-203ENST00000401787 PROM2Q8N271 834 aa32.3■■■□□ 2.76
KDM4C-203ENST00000401787 CDCA7LQ96GN5 454 aa32.28■■■□□ 2.76
KDM4C-203ENST00000401787 SLC4A9Q96Q91 983 aa32.28■■■□□ 2.76
KDM4C-203ENST00000401787 FANCIQ9NVI1 1328 aa32.28■■■□□ 2.76
KDM4C-203ENST00000401787 SNRPA1P09661 255 aaKnown RBP32.27■■■□□ 2.76
KDM4C-203ENST00000401787 VSIG10Q8N0Z9 540 aa32.27■■■□□ 2.76
KDM4C-203ENST00000401787 LRRC4BQ9NT99 713 aa32.27■■■□□ 2.76
KDM4C-203ENST00000401787 ITPK1Q13572 414 aa32.26■■■□□ 2.76
KDM4C-203ENST00000401787 DNAJC10Q8IXB1 793 aa32.26■■■□□ 2.76
KDM4C-203ENST00000401787 HMGB2P26583 209 aaKnown RBP32.25■■■□□ 2.75
KDM4C-203ENST00000401787 SLFN5Q08AF3 891 aa32.25■■■□□ 2.75
KDM4C-203ENST00000401787 KRT24Q2M2I5 525 aa32.25■■■□□ 2.75
KDM4C-203ENST00000401787 TEX13AQ9BXU3 409 aaPredicted RBP32.25■■■□□ 2.75
KDM4C-203ENST00000401787 RREB1Q92766 1687 aa32.23■■■□□ 2.75
KDM4C-203ENST00000401787 C5P01031 1676 aa32.22■■■□□ 2.75
KDM4C-203ENST00000401787 ZNF831Q5JPB2 1677 aa32.22■■■□□ 2.75
KDM4C-203ENST00000401787 TJP1Q07157 1748 aa32.22■■■□□ 2.75
KDM4C-203ENST00000401787 ELL2O00472 640 aaPredicted RBP32.22■■■□□ 2.75
KDM4C-203ENST00000401787 GIGYF1O75420 1035 aaPredicted RBP32.22■■■□□ 2.75
KDM4C-203ENST00000401787 STARD3NLO95772 234 aa32.22■■■□□ 2.75
KDM4C-203ENST00000401787 TAF1LQ8IZX4 1826 aa32.21■■■□□ 2.75
KDM4C-203ENST00000401787 PRAMEF22A3QJZ6 481 aa32.21■■■□□ 2.75
KDM4C-203ENST00000401787 LINC00116Q8NCU8 138 aa32.21■■■□□ 2.75
KDM4C-203ENST00000401787 DUSP27Q5VZP5 1158 aa32.19■■■□□ 2.74
KDM4C-203ENST00000401787 NUP188Q5SRE5 1749 aa32.19■■■□□ 2.74
KDM4C-203ENST00000401787 EIF2S2P20042 333 aaKnown RBP32.18■■■□□ 2.74
KDM4C-203ENST00000401787 EXOSC9Q06265 439 aaKnown RBP32.18■■■□□ 2.74
KDM4C-203ENST00000401787 C8orf58Q8NAV2 365 aa32.18■■■□□ 2.74
KDM4C-203ENST00000401787 USP16Q9Y5T5 823 aa32.18■■■□□ 2.74
KDM4C-203ENST00000401787 AK7Q96M32 723 aa32.17■■■□□ 2.74
KDM4C-203ENST00000401787 NBPF14Q5TI25 921 aa32.17■■■□□ 2.74
KDM4C-203ENST00000401787 COL5A3P25940 1745 aaPredicted RBP32.16■■■□□ 2.74
KDM4C-203ENST00000401787 CYP19A1P11511 503 aaPredicted RBP32.16■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms