RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 RAB3GAP2Q9H2M9 1393 aa7.35□□□□□ -1.23
HMGB3P7-201ENST00000400214 RAB11FIP3O75154 756 aa7.35□□□□□ -1.23
HMGB3P7-201ENST00000400214 NLRP7Q8WX94 980 aa7.35□□□□□ -1.23
HMGB3P7-201ENST00000400214 DDX12PQ92771 950 aa7.35□□□□□ -1.23
HMGB3P7-201ENST00000400214 TRIM52Q96A61 297 aa7.35□□□□□ -1.23
HMGB3P7-201ENST00000400214 PPLO60437 1756 aa7.35□□□□□ -1.23
HMGB3P7-201ENST00000400214 XIRP1Q702N8 1843 aaKnown RBP7.34□□□□□ -1.23
HMGB3P7-201ENST00000400214 ANKRD33BA6NCL7 494 aa7.34□□□□□ -1.23
HMGB3P7-201ENST00000400214 PTPN5P54829 565 aa7.34□□□□□ -1.23
HMGB3P7-201ENST00000400214 MARSP56192 900 aaKnown RBP7.34□□□□□ -1.23
HMGB3P7-201ENST00000400214 TAGLNQ01995 201 aaKnown RBP7.34□□□□□ -1.23
HMGB3P7-201ENST00000400214 VAC14Q08AM6 782 aa7.34□□□□□ -1.23
HMGB3P7-201ENST00000400214 ZNF326Q5BKZ1 582 aaKnown RBP7.34□□□□□ -1.23
HMGB3P7-201ENST00000400214 MPHOSPH9Q99550 1183 aa7.34□□□□□ -1.23
HMGB3P7-201ENST00000400214 SUGT1Q9Y2Z0 365 aa7.34□□□□□ -1.23
HMGB3P7-201ENST00000400214 EID1Q9Y6B2 187 aa7.34□□□□□ -1.23
HMGB3P7-201ENST00000400214 CPS1P31327 1500 aa7.33□□□□□ -1.24
HMGB3P7-201ENST00000400214 IFT172Q9UG01 1749 aa7.33□□□□□ -1.24
HMGB3P7-201ENST00000400214 SOWAHDA6NJG2 315 aa7.33□□□□□ -1.24
HMGB3P7-201ENST00000400214 AP1G2O75843 785 aa7.33□□□□□ -1.24
HMGB3P7-201ENST00000400214 HDGFP51858 240 aaKnown RBP7.33□□□□□ -1.24
HMGB3P7-201ENST00000400214 FOSBP53539 338 aa7.33□□□□□ -1.24
HMGB3P7-201ENST00000400214 RBM46Q8TBY0 533 aaKnown RBP7.33□□□□□ -1.24
HMGB3P7-201ENST00000400214 CERKQ8TCT0 537 aa7.33□□□□□ -1.24
HMGB3P7-201ENST00000400214 ALG2Q9H553 416 aa7.33□□□□□ -1.24
HMGB3P7-201ENST00000400214 RIMS2Q9UQ26 1411 aa7.33□□□□□ -1.24
HMGB3P7-201ENST00000400214 DIP2AQ14689 1571 aa7.33□□□□□ -1.24
HMGB3P7-201ENST00000400214 PLEKHG1Q9ULL1 1385 aa7.33□□□□□ -1.24
HMGB3P7-201ENST00000400214 NEXMIFQ5QGS0 1516 aa7.32□□□□□ -1.24
HMGB3P7-201ENST00000400214 ZNF335Q9H4Z2 1342 aaPredicted RBP7.32□□□□□ -1.24
HMGB3P7-201ENST00000400214 NRXN3Q9Y4C0 1643 aa7.32□□□□□ -1.24
HMGB3P7-201ENST00000400214 WASHC4Q2M389 1173 aa7.32□□□□□ -1.24
HMGB3P7-201ENST00000400214 PPP4R3BQ5MIZ7 849 aa7.32□□□□□ -1.24
HMGB3P7-201ENST00000400214 TMEM164Q5U3C3 297 aa7.32□□□□□ -1.24
HMGB3P7-201ENST00000400214 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.32□□□□□ -1.24
HMGB3P7-201ENST00000400214 PTCD2Q8WV60 388 aaKnown RBP7.32□□□□□ -1.24
HMGB3P7-201ENST00000400214 STAC3Q96MF2 364 aa7.32□□□□□ -1.24
HMGB3P7-201ENST00000400214 MAFBQ9Y5Q3 323 aaPredicted RBP7.32□□□□□ -1.24
HMGB3P7-201ENST00000400214 NWD1Q149M9 1564 aa7.32□□□□□ -1.24
HMGB3P7-201ENST00000400214 SETD1AO15047 1707 aaKnown RBP7.31□□□□□ -1.24
HMGB3P7-201ENST00000400214 MAP3K9P80192 1104 aa7.31□□□□□ -1.24
HMGB3P7-201ENST00000400214 THSD4Q6ZMP0 1018 aa7.31□□□□□ -1.24
HMGB3P7-201ENST00000400214 RIC3Q7Z5B4 369 aa7.31□□□□□ -1.24
HMGB3P7-201ENST00000400214 STK32AQ8WU08 396 aa7.31□□□□□ -1.24
HMGB3P7-201ENST00000400214 GJD4Q96KN9 370 aaPredicted RBP7.31□□□□□ -1.24
HMGB3P7-201ENST00000400214 CDCA7Q9BWT1 371 aaPredicted RBP7.31□□□□□ -1.24
HMGB3P7-201ENST00000400214 RBM27Q9P2N5 1060 aaKnown RBP7.31□□□□□ -1.24
HMGB3P7-201ENST00000400214 ZMIZ1Q9ULJ6 1067 aa7.31□□□□□ -1.24
HMGB3P7-201ENST00000400214 VPS9D1Q9Y2B5 631 aa7.31□□□□□ -1.24
HMGB3P7-201ENST00000400214 NDUFB9Q9Y6M9 179 aa7.31□□□□□ -1.24
HMGB3P7-201ENST00000400214 SETBP1Q9Y6X0 1596 aa7.31□□□□□ -1.24
HMGB3P7-201ENST00000400214 RPGRIP1LQ68CZ1 1315 aa7.3□□□□□ -1.24
HMGB3P7-201ENST00000400214 CCDC144AA2RUR9 1427 aa7.3□□□□□ -1.24
HMGB3P7-201ENST00000400214 SPATA31E1Q6ZUB1 1445 aa7.3□□□□□ -1.24
HMGB3P7-201ENST00000400214 TPD52L2O43399 206 aaKnown RBP7.3□□□□□ -1.24
HMGB3P7-201ENST00000400214 GPR37L1O60883 481 aa7.3□□□□□ -1.24
HMGB3P7-201ENST00000400214 USP17L8P0C7I0 530 aa7.3□□□□□ -1.24
HMGB3P7-201ENST00000400214 ERCC5P28715 1186 aaPredicted RBP7.3□□□□□ -1.24
HMGB3P7-201ENST00000400214 ARID4AP29374 1257 aaPredicted RBP7.3□□□□□ -1.24
HMGB3P7-201ENST00000400214 TMC2Q8TDI7 906 aa7.3□□□□□ -1.24
HMGB3P7-201ENST00000400214 FBXO41Q8TF61 875 aa7.3□□□□□ -1.24
HMGB3P7-201ENST00000400214 GPATCH3Q96I76 525 aa7.3□□□□□ -1.24
HMGB3P7-201ENST00000400214 DNAJC2Q99543 621 aaKnown RBP7.3□□□□□ -1.24
HMGB3P7-201ENST00000400214 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.3□□□□□ -1.24
HMGB3P7-201ENST00000400214 SBNO2Q9Y2G9 1366 aa7.3□□□□□ -1.24
HMGB3P7-201ENST00000400214 ADAMTS13Q76LX8 1427 aa7.29□□□□□ -1.24
HMGB3P7-201ENST00000400214 SERPINB4P48594 390 aa7.29□□□□□ -1.24
HMGB3P7-201ENST00000400214 CSPP1Q1MSJ5 1256 aa7.29□□□□□ -1.24
HMGB3P7-201ENST00000400214 TSNAXIP1Q2TAA8 658 aa7.29□□□□□ -1.24
HMGB3P7-201ENST00000400214 Q6ZNB5 142 aa7.29□□□□□ -1.24
HMGB3P7-201ENST00000400214 NOP9Q86U38 636 aaKnown RBP7.29□□□□□ -1.24
HMGB3P7-201ENST00000400214 EXOC8Q8IYI6 725 aa7.29□□□□□ -1.24
HMGB3P7-201ENST00000400214 LNPKQ9C0E8 428 aa7.29□□□□□ -1.24
HMGB3P7-201ENST00000400214 MYH16Q9H6N6 1097 aa7.29□□□□□ -1.24
HMGB3P7-201ENST00000400214 TBX22Q9Y458 520 aa7.29□□□□□ -1.24
HMGB3P7-201ENST00000400214 PIK3R4Q99570 1358 aa7.29□□□□□ -1.24
HMGB3P7-201ENST00000400214 ANKRD30BQ9BXX2 1392 aa7.29□□□□□ -1.24
HMGB3P7-201ENST00000400214 LRRC7Q96NW7 1537 aa7.28□□□□□ -1.24
HMGB3P7-201ENST00000400214 KCNA6P17658 529 aa7.28□□□□□ -1.24
HMGB3P7-201ENST00000400214 FOXK1P85037 733 aa7.28□□□□□ -1.24
HMGB3P7-201ENST00000400214 KCNK17Q96T54 332 aa7.28□□□□□ -1.24
HMGB3P7-201ENST00000400214 SLC4A5Q9BY07 1137 aa7.28□□□□□ -1.24
HMGB3P7-201ENST00000400214 CDHR5Q9HBB8 845 aa7.28□□□□□ -1.24
HMGB3P7-201ENST00000400214 NPDC1Q9NQX5 325 aaPredicted RBP7.28□□□□□ -1.24
HMGB3P7-201ENST00000400214 BIN2Q9UBW5 565 aaPredicted RBP7.28□□□□□ -1.24
HMGB3P7-201ENST00000400214 NKTRP30414 1462 aaKnown RBP7.28□□□□□ -1.24
HMGB3P7-201ENST00000400214 XRN1Q8IZH2 1706 aaKnown RBP7.27□□□□□ -1.25
HMGB3P7-201ENST00000400214 BHMG1C9JSJ3 638 aaPredicted RBP7.27□□□□□ -1.25
HMGB3P7-201ENST00000400214 SSFA2P28290 1259 aa7.27□□□□□ -1.25
HMGB3P7-201ENST00000400214 DIXDC1Q155Q3 683 aa7.27□□□□□ -1.25
HMGB3P7-201ENST00000400214 QPCTQ16769 361 aa7.27□□□□□ -1.25
HMGB3P7-201ENST00000400214 FAM161AQ3B820 660 aa7.27□□□□□ -1.25
HMGB3P7-201ENST00000400214 TBC1D9Q6ZT07 1266 aa7.27□□□□□ -1.25
HMGB3P7-201ENST00000400214 FBXO33Q7Z6M2 555 aa7.27□□□□□ -1.25
HMGB3P7-201ENST00000400214 PRR7Q8TB68 274 aa7.27□□□□□ -1.25
HMGB3P7-201ENST00000400214 SLAIN2Q9P270 581 aa7.27□□□□□ -1.25
HMGB3P7-201ENST00000400214 TMA7Q9Y2S6 64 aaKnown RBP7.27□□□□□ -1.25
HMGB3P7-201ENST00000400214 ALKQ9UM73 1620 aa7.27□□□□□ -1.25
HMGB3P7-201ENST00000400214 ELOAQ14241 798 aaKnown RBP7.26□□□□□ -1.25
HMGB3P7-201ENST00000400214 TUSC1Q2TAM9 212 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms