RNA–Protein interactions for RNA: ENST00000400188.7

GABRB3-203, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2 BASIC

Gene GABRB3, Length 1,900 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-203ENST00000400188 HSP90AB1P08238 724 aaKnown RBP12.75□□□□□ -0.37
GABRB3-203ENST00000400188 RIPK4P57078 832 aa12.75□□□□□ -0.37
GABRB3-203ENST00000400188 ASAP1Q9ULH1 1129 aa12.75□□□□□ -0.37
GABRB3-203ENST00000400188 VIRMAQ69YN4 1812 aaKnown RBP12.75□□□□□ -0.37
GABRB3-203ENST00000400188 ADAMTS7Q9UKP4 1686 aa12.75□□□□□ -0.37
GABRB3-203ENST00000400188 EZH2Q15910 746 aaKnown RBP12.74□□□□□ -0.37
GABRB3-203ENST00000400188 PNNQ9H307 717 aaKnown RBP12.74□□□□□ -0.37
GABRB3-203ENST00000400188 TMOD3Q9NYL9 352 aa12.74□□□□□ -0.37
GABRB3-203ENST00000400188 CABP4P57796 275 aa12.74□□□□□ -0.37
GABRB3-203ENST00000400188 SF3B2Q13435 895 aaKnown RBP12.74□□□□□ -0.37
GABRB3-203ENST00000400188 PROM2Q8N271 834 aa12.74□□□□□ -0.37
GABRB3-203ENST00000400188 SLC52A2Q9HAB3 445 aa12.74□□□□□ -0.37
GABRB3-203ENST00000400188 TRIM35Q9UPQ4 493 aa12.74□□□□□ -0.37
GABRB3-203ENST00000400188 SALL2Q9Y467 1007 aaPredicted RBP12.74□□□□□ -0.37
GABRB3-203ENST00000400188 CEMIPQ8WUJ3 1361 aa12.73□□□□□ -0.37
GABRB3-203ENST00000400188 ERVV-2B6SEH9 535 aa12.73□□□□□ -0.37
GABRB3-203ENST00000400188 SLC39A6Q13433 755 aa12.73□□□□□ -0.37
GABRB3-203ENST00000400188 CAMKK2Q96RR4 588 aa12.72□□□□□ -0.37
GABRB3-203ENST00000400188 ATG3Q9NT62 314 aa12.72□□□□□ -0.37
GABRB3-203ENST00000400188 CCDC125Q86Z20 511 aa12.72□□□□□ -0.37
GABRB3-203ENST00000400188 RTF1Q92541 710 aaKnown RBP12.72□□□□□ -0.37
GABRB3-203ENST00000400188 MIS18AQ9NYP9 233 aa12.72□□□□□ -0.37
GABRB3-203ENST00000400188 MRC1P22897 1456 aa12.72□□□□□ -0.37
GABRB3-203ENST00000400188 BAG6P46379 1132 aa12.71□□□□□ -0.37
GABRB3-203ENST00000400188 KCNQ3O43525 872 aa12.7□□□□□ -0.38
GABRB3-203ENST00000400188 LRRC4BQ9NT99 713 aa12.7□□□□□ -0.38
GABRB3-203ENST00000400188 PALLDQ8WX93 1383 aa12.7□□□□□ -0.38
GABRB3-203ENST00000400188 PLSCR1O15162 318 aa12.7□□□□□ -0.38
GABRB3-203ENST00000400188 TEFQ10587 303 aa12.7□□□□□ -0.38
GABRB3-203ENST00000400188 SLC4A9Q96Q91 983 aa12.7□□□□□ -0.38
GABRB3-203ENST00000400188 PTCD1O75127 700 aaKnown RBP12.69□□□□□ -0.38
GABRB3-203ENST00000400188 TXNRD1Q16881 649 aa12.69□□□□□ -0.38
GABRB3-203ENST00000400188 SIPA1L3O60292 1781 aaPredicted RBP12.69□□□□□ -0.38
GABRB3-203ENST00000400188 HTATSF1O43719 755 aaKnown RBP12.68□□□□□ -0.38
GABRB3-203ENST00000400188 BTBD11A6QL63 1104 aa12.67□□□□□ -0.38
GABRB3-203ENST00000400188 RBM42Q9BTD8 480 aaKnown RBP12.67□□□□□ -0.38
GABRB3-203ENST00000400188 LY75O60449 1722 aa12.66□□□□□ -0.38
GABRB3-203ENST00000400188 LOC102724428A0A0B4J2F2 783 aa12.66□□□□□ -0.38
GABRB3-203ENST00000400188 SIK1P57059 783 aa12.66□□□□□ -0.38
GABRB3-203ENST00000400188 PAPPAQ13219 1627 aa12.66□□□□□ -0.38
GABRB3-203ENST00000400188 ITPK1Q13572 414 aa12.66□□□□□ -0.38
GABRB3-203ENST00000400188 ZNF790Q6PG37 636 aa12.66□□□□□ -0.38
GABRB3-203ENST00000400188 ANO8Q9HCE9 1232 aaPredicted RBP12.66□□□□□ -0.38
GABRB3-203ENST00000400188 CCNL1Q9UK58 526 aaPredicted RBP12.66□□□□□ -0.38
GABRB3-203ENST00000400188 LAS1LQ9Y4W2 734 aaKnown RBP12.66□□□□□ -0.38
GABRB3-203ENST00000400188 RREB1Q92766 1687 aa12.65□□□□□ -0.38
GABRB3-203ENST00000400188 KCPQ6ZWJ8 1503 aa12.65□□□□□ -0.38
GABRB3-203ENST00000400188 PRAMEF22A3QJZ6 481 aa12.65□□□□□ -0.38
GABRB3-203ENST00000400188 LMOD3Q0VAK6 560 aa12.65□□□□□ -0.38
GABRB3-203ENST00000400188 TAF7Q15545 349 aaPredicted RBP12.65□□□□□ -0.38
GABRB3-203ENST00000400188 WWC1Q8IX03 1113 aa12.65□□□□□ -0.38
GABRB3-203ENST00000400188 ZNF496Q96IT1 587 aaPredicted RBP12.65□□□□□ -0.38
GABRB3-203ENST00000400188 RGPD3A6NKT7 1758 aaPredicted RBP12.65□□□□□ -0.39
GABRB3-203ENST00000400188 RGPD4Q7Z3J3 1758 aa12.65□□□□□ -0.39
GABRB3-203ENST00000400188 NUP188Q5SRE5 1749 aa12.65□□□□□ -0.39
GABRB3-203ENST00000400188 SMIM5Q71RC9 77 aa12.64□□□□□ -0.39
GABRB3-203ENST00000400188 SMARCC1Q92922 1105 aaPredicted RBP12.64□□□□□ -0.39
GABRB3-203ENST00000400188 ATP6V1AP38606 617 aa12.64□□□□□ -0.39
GABRB3-203ENST00000400188 ZNF827Q17R98 1081 aa12.63□□□□□ -0.39
GABRB3-203ENST00000400188 KRT24Q2M2I5 525 aa12.63□□□□□ -0.39
GABRB3-203ENST00000400188 AMIGO3Q86WK7 504 aa12.63□□□□□ -0.39
GABRB3-203ENST00000400188 LINC00116Q8NCU8 138 aa12.63□□□□□ -0.39
GABRB3-203ENST00000400188 SPINK5Q9NQ38 1064 aaPredicted RBP12.63□□□□□ -0.39
GABRB3-203ENST00000400188 RBM19Q9Y4C8 960 aaKnown RBP12.63□□□□□ -0.39
GABRB3-203ENST00000400188 UBR2Q8IWV8 1755 aa12.63□□□□□ -0.39
GABRB3-203ENST00000400188 TTC5Q8N0Z6 440 aa12.62□□□□□ -0.39
GABRB3-203ENST00000400188 TSPYL4Q9UJ04 414 aa12.62□□□□□ -0.39
GABRB3-203ENST00000400188 CCDC27Q2M243 656 aa12.62□□□□□ -0.39
GABRB3-203ENST00000400188 SLC27A3Q5K4L6 730 aa12.62□□□□□ -0.39
GABRB3-203ENST00000400188 ERICH6BQ5W0A0 696 aa12.62□□□□□ -0.39
GABRB3-203ENST00000400188 DNAJC10Q8IXB1 793 aa12.62□□□□□ -0.39
GABRB3-203ENST00000400188 KDM3BQ7LBC6 1761 aa12.61□□□□□ -0.39
GABRB3-203ENST00000400188 PSDA5PKW4 1024 aaPredicted RBP12.61□□□□□ -0.39
GABRB3-203ENST00000400188 CHL1O00533 1208 aa12.61□□□□□ -0.39
GABRB3-203ENST00000400188 TSR2Q969E8 191 aaKnown RBP12.61□□□□□ -0.39
GABRB3-203ENST00000400188 PDGFDQ9GZP0 370 aaPredicted RBP12.61□□□□□ -0.39
GABRB3-203ENST00000400188 MBIPQ9NS73 344 aa12.61□□□□□ -0.39
GABRB3-203ENST00000400188 ZNF521Q96K83 1311 aa12.61□□□□□ -0.39
GABRB3-203ENST00000400188 TJP1Q07157 1748 aa12.61□□□□□ -0.39
GABRB3-203ENST00000400188 ZNF853P0CG23 659 aa12.6□□□□□ -0.39
GABRB3-203ENST00000400188 TAF1LQ8IZX4 1826 aa12.6□□□□□ -0.39
GABRB3-203ENST00000400188 C5P01031 1676 aa12.6□□□□□ -0.39
GABRB3-203ENST00000400188 EIF4A1P60842 406 aaKnown RBP12.6□□□□□ -0.39
GABRB3-203ENST00000400188 CFAP44Q96MT7 982 aa12.6□□□□□ -0.39
GABRB3-203ENST00000400188 HEG1Q9ULI3 1381 aa12.6□□□□□ -0.39
GABRB3-203ENST00000400188 PIP4K2AP48426 406 aaPredicted RBP12.59□□□□□ -0.39
GABRB3-203ENST00000400188 HNRNPUQ00839 825 aaKnown RBP eCLIP12.59□□□□□ -0.39
GABRB3-203ENST00000400188 R3HDM1Q15032 1099 aaKnown RBP12.59□□□□□ -0.39
GABRB3-203ENST00000400188 AKT1S1Q96B36 256 aa12.59□□□□□ -0.39
GABRB3-203ENST00000400188 FMNL2Q96PY5 1086 aa12.59□□□□□ -0.39
GABRB3-203ENST00000400188 USP16Q9Y5T5 823 aa12.59□□□□□ -0.39
GABRB3-203ENST00000400188 IFT57Q9NWB7 429 aa12.58□□□□□ -0.39
GABRB3-203ENST00000400188 C4BP0C0L5 1744 aa12.58□□□□□ -0.4
GABRB3-203ENST00000400188 CDCA7LQ96GN5 454 aa12.58□□□□□ -0.4
GABRB3-203ENST00000400188 COL5A3P25940 1745 aaPredicted RBP12.58□□□□□ -0.4
GABRB3-203ENST00000400188 MYH14Q7Z406 1995 aaKnown RBP12.58□□□□□ -0.4
GABRB3-203ENST00000400188 FANCIQ9NVI1 1328 aa12.57□□□□□ -0.4
GABRB3-203ENST00000400188 GIGYF1O75420 1035 aaPredicted RBP12.57□□□□□ -0.4
GABRB3-203ENST00000400188 CYP19A1P11511 503 aaPredicted RBP12.57□□□□□ -0.4
GABRB3-203ENST00000400188 CRKLP46109 303 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms