RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 HEG1Q9ULI3 1381 aa9.95□□□□□ -0.82
USP16-204ENST00000399976 SCN7AQ01118 1682 aa9.95□□□□□ -0.82
USP16-204ENST00000399976 BAG6P46379 1132 aa9.95□□□□□ -0.82
USP16-204ENST00000399976 SLC52A2Q9HAB3 445 aa9.95□□□□□ -0.82
USP16-204ENST00000399976 N4BP2Q86UW6 1770 aaPredicted RBP9.94□□□□□ -0.82
USP16-204ENST00000399976 C4AP0C0L4 1744 aa9.94□□□□□ -0.82
USP16-204ENST00000399976 MRS2Q9HD23 443 aa9.94□□□□□ -0.82
USP16-204ENST00000399976 ADAMTS8Q9UP79 889 aa9.94□□□□□ -0.82
USP16-204ENST00000399976 HMOX1P09601 288 aa9.93□□□□□ -0.82
USP16-204ENST00000399976 TMPOP42166 694 aaKnown RBP9.93□□□□□ -0.82
USP16-204ENST00000399976 CAMKK2Q96RR4 588 aa9.93□□□□□ -0.82
USP16-204ENST00000399976 SF3B2Q13435 895 aaKnown RBP9.93□□□□□ -0.82
USP16-204ENST00000399976 PHACTR3Q96KR7 559 aa9.93□□□□□ -0.82
USP16-204ENST00000399976 KAT6BQ8WYB5 2073 aa9.93□□□□□ -0.82
USP16-204ENST00000399976 HOXB7P09629 217 aa9.92□□□□□ -0.82
USP16-204ENST00000399976 CHMP4AQ9BY43 222 aa9.92□□□□□ -0.82
USP16-204ENST00000399976 TMOD3Q9NYL9 352 aa9.92□□□□□ -0.82
USP16-204ENST00000399976 WDR63Q8IWG1 891 aa9.91□□□□□ -0.82
USP16-204ENST00000399976 PALLDQ8WX93 1383 aa9.91□□□□□ -0.82
USP16-204ENST00000399976 ZNF521Q96K83 1311 aa9.91□□□□□ -0.82
USP16-204ENST00000399976 ANKRD36CQ5JPF3 1778 aa9.91□□□□□ -0.82
USP16-204ENST00000399976 A0A0G2JS52 829 aa9.91□□□□□ -0.82
USP16-204ENST00000399976 MYT1Q01538 1121 aa9.91□□□□□ -0.82
USP16-204ENST00000399976 RC3H1Q5TC82 1133 aaKnown RBP9.91□□□□□ -0.82
USP16-204ENST00000399976 TEX13AQ9BXU3 409 aaPredicted RBP9.91□□□□□ -0.82
USP16-204ENST00000399976 ERBB4Q15303 1308 aa9.91□□□□□ -0.82
USP16-204ENST00000399976 CNTNAP4Q9C0A0 1308 aa9.91□□□□□ -0.82
USP16-204ENST00000399976 IL17REQ8NFR9 667 aa9.9□□□□□ -0.82
USP16-204ENST00000399976 RTF1Q92541 710 aaKnown RBP9.9□□□□□ -0.82
USP16-204ENST00000399976 ZNF853P0CG23 659 aa9.9□□□□□ -0.82
USP16-204ENST00000399976 DDX54Q8TDD1 881 aaKnown RBP9.9□□□□□ -0.82
USP16-204ENST00000399976 NRXN2Q9P2S2 1712 aa9.9□□□□□ -0.82
USP16-204ENST00000399976 KIF13BQ9NQT8 1826 aa9.9□□□□□ -0.82
USP16-204ENST00000399976 CABP4P57796 275 aa9.9□□□□□ -0.83
USP16-204ENST00000399976 PIGBQ92521 554 aa9.9□□□□□ -0.83
USP16-204ENST00000399976 IFT57Q9NWB7 429 aa9.9□□□□□ -0.83
USP16-204ENST00000399976 TAF7Q15545 349 aaPredicted RBP9.89□□□□□ -0.83
USP16-204ENST00000399976 TRIM35Q9UPQ4 493 aa9.89□□□□□ -0.83
USP16-204ENST00000399976 MYH14Q7Z406 1995 aaKnown RBP9.89□□□□□ -0.83
USP16-204ENST00000399976 IBTKQ9P2D0 1353 aaPredicted RBP9.89□□□□□ -0.83
USP16-204ENST00000399976 PRIM1P49642 420 aaKnown RBP9.89□□□□□ -0.83
USP16-204ENST00000399976 CCDC184Q52MB2 194 aa9.88□□□□□ -0.83
USP16-204ENST00000399976 TRIM37O94972 964 aa9.88□□□□□ -0.83
USP16-204ENST00000399976 ATG3Q9NT62 314 aa9.88□□□□□ -0.83
USP16-204ENST00000399976 CHL1O00533 1208 aa9.87□□□□□ -0.83
USP16-204ENST00000399976 ADRA2BP18089 450 aa9.87□□□□□ -0.83
USP16-204ENST00000399976 RIPK4P57078 832 aa9.87□□□□□ -0.83
USP16-204ENST00000399976 TEFQ10587 303 aa9.87□□□□□ -0.83
USP16-204ENST00000399976 CFAP44Q96MT7 982 aa9.87□□□□□ -0.83
USP16-204ENST00000399976 FLAD1Q8NFF5 587 aa9.87□□□□□ -0.83
USP16-204ENST00000399976 GNAI1P63096 354 aa9.87□□□□□ -0.83
USP16-204ENST00000399976 APBA3O96018 575 aa9.86□□□□□ -0.83
USP16-204ENST00000399976 ZNF790Q6PG37 636 aa9.86□□□□□ -0.83
USP16-204ENST00000399976 MPRIPQ6WCQ1 1025 aa9.86□□□□□ -0.83
USP16-204ENST00000399976 LAMB2P55268 1798 aa9.86□□□□□ -0.83
USP16-204ENST00000399976 TXNRD1Q16881 649 aa9.86□□□□□ -0.83
USP16-204ENST00000399976 LGR6Q9HBX8 967 aa9.86□□□□□ -0.83
USP16-204ENST00000399976 CT47B1P0C2W7 299 aaPredicted RBP9.85□□□□□ -0.83
USP16-204ENST00000399976 AKT1S1Q96B36 256 aa9.85□□□□□ -0.83
USP16-204ENST00000399976 FMNL2Q96PY5 1086 aa9.85□□□□□ -0.83
USP16-204ENST00000399976 KCNQ2O43526 872 aa9.85□□□□□ -0.83
USP16-204ENST00000399976 LOC102724428A0A0B4J2F2 783 aa9.84□□□□□ -0.83
USP16-204ENST00000399976 SIK1P57059 783 aa9.84□□□□□ -0.83
USP16-204ENST00000399976 NFATC2IPQ8NCF5 419 aa9.84□□□□□ -0.83
USP16-204ENST00000399976 ZNF428Q96B54 188 aa9.84□□□□□ -0.83
USP16-204ENST00000399976 DLEC1Q9Y238 1755 aa9.84□□□□□ -0.83
USP16-204ENST00000399976 APAF1O14727 1248 aa9.84□□□□□ -0.83
USP16-204ENST00000399976 WWC1Q8IX03 1113 aa9.84□□□□□ -0.83
USP16-204ENST00000399976 PROM2Q8N271 834 aa9.84□□□□□ -0.83
USP16-204ENST00000399976 SLC16A10Q8TF71 515 aa9.84□□□□□ -0.83
USP16-204ENST00000399976 ARFGEF2Q9Y6D5 1785 aa9.84□□□□□ -0.83
USP16-204ENST00000399976 BTBD11A6QL63 1104 aa9.84□□□□□ -0.83
USP16-204ENST00000399976 NBPF14Q5TI25 921 aa9.84□□□□□ -0.83
USP16-204ENST00000399976 SSFA2P28290 1259 aa9.83□□□□□ -0.84
USP16-204ENST00000399976 TRMT2AQ8IZ69 625 aaKnown RBP9.83□□□□□ -0.84
USP16-204ENST00000399976 TTC5Q8N0Z6 440 aa9.83□□□□□ -0.84
USP16-204ENST00000399976 MIER1Q8N108 512 aa9.83□□□□□ -0.84
USP16-204ENST00000399976 NUP98P52948 1817 aa9.83□□□□□ -0.84
USP16-204ENST00000399976 EIF4A1P60842 406 aaKnown RBP9.83□□□□□ -0.84
USP16-204ENST00000399976 SNRPA1P09661 255 aaKnown RBP9.82□□□□□ -0.84
USP16-204ENST00000399976 ACSBG1Q96GR2 724 aa9.82□□□□□ -0.84
USP16-204ENST00000399976 CCNL1Q9UK58 526 aaPredicted RBP9.82□□□□□ -0.84
USP16-204ENST00000399976 ZBED9Q6R2W3 1325 aa9.82□□□□□ -0.84
USP16-204ENST00000399976 RIC1Q4ADV7 1423 aa9.82□□□□□ -0.84
USP16-204ENST00000399976 ASAP1Q9ULH1 1129 aa9.81□□□□□ -0.84
USP16-204ENST00000399976 EZH2Q15910 746 aaKnown RBP9.81□□□□□ -0.84
USP16-204ENST00000399976 MYH16Q9H6N6 1097 aa9.81□□□□□ -0.84
USP16-204ENST00000399976 A0A087WZG4 1122 aa9.81□□□□□ -0.84
USP16-204ENST00000399976 E9PSI1 815 aa9.81□□□□□ -0.84
USP16-204ENST00000399976 MCM10Q7L590 875 aa9.81□□□□□ -0.84
USP16-204ENST00000399976 CCDC146Q8IYE0 955 aa9.81□□□□□ -0.84
USP16-204ENST00000399976 KIAA1551Q9HCM1 1747 aa9.8□□□□□ -0.84
USP16-204ENST00000399976 STARD3NLO95772 234 aa9.8□□□□□ -0.84
USP16-204ENST00000399976 CYP19A1P11511 503 aaPredicted RBP9.8□□□□□ -0.84
USP16-204ENST00000399976 EN1Q05925 392 aaPredicted RBP9.8□□□□□ -0.84
USP16-204ENST00000399976 SLC15A2Q16348 729 aa9.8□□□□□ -0.84
USP16-204ENST00000399976 FAM182BQ5T319 152 aa9.8□□□□□ -0.84
USP16-204ENST00000399976 STK32BQ9NY57 414 aa9.8□□□□□ -0.84
USP16-204ENST00000399976 GIGYF1O75420 1035 aaPredicted RBP9.8□□□□□ -0.84
USP16-204ENST00000399976 RPS6KA4O75676 772 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms