RNA–Protein interactions for RNA: ENST00000399892.6

SEH1L-202, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best) BASIC

Gene SEH1L, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-202ENST00000399892 EN1Q05925 392 aaPredicted RBP23.26■■□□□ 1.31
SEH1L-202ENST00000399892 SENP3-EIF4A1A0A087X0R7 540 aa23.26■■□□□ 1.31
SEH1L-202ENST00000399892 CEMIPQ8WUJ3 1361 aa23.26■■□□□ 1.31
SEH1L-202ENST00000399892 PLSCR1O15162 318 aa23.25■■□□□ 1.31
SEH1L-202ENST00000399892 MRC1P22897 1456 aa23.24■■□□□ 1.31
SEH1L-202ENST00000399892 SMARCC1Q92922 1105 aaPredicted RBP23.24■■□□□ 1.31
SEH1L-202ENST00000399892 THUMPD2Q9BTF0 503 aaKnown RBP23.23■■□□□ 1.31
SEH1L-202ENST00000399892 ASAP1Q9ULH1 1129 aa23.23■■□□□ 1.31
SEH1L-202ENST00000399892 PALLDQ8WX93 1383 aa23.22■■□□□ 1.31
SEH1L-202ENST00000399892 SALL2Q9Y467 1007 aaPredicted RBP23.22■■□□□ 1.31
SEH1L-202ENST00000399892 RGPD3A6NKT7 1758 aaPredicted RBP23.21■■□□□ 1.31
SEH1L-202ENST00000399892 RGPD4Q7Z3J3 1758 aa23.21■■□□□ 1.31
SEH1L-202ENST00000399892 SIPA1L3O60292 1781 aaPredicted RBP23.21■■□□□ 1.31
SEH1L-202ENST00000399892 EZH2Q15910 746 aaKnown RBP23.21■■□□□ 1.31
SEH1L-202ENST00000399892 TRIM35Q9UPQ4 493 aa23.21■■□□□ 1.31
SEH1L-202ENST00000399892 BTBD11A6QL63 1104 aa23.2■■□□□ 1.3
SEH1L-202ENST00000399892 ATG3Q9NT62 314 aa23.2■■□□□ 1.3
SEH1L-202ENST00000399892 TAF7Q15545 349 aaPredicted RBP23.19■■□□□ 1.3
SEH1L-202ENST00000399892 TTC5Q8N0Z6 440 aa23.19■■□□□ 1.3
SEH1L-202ENST00000399892 CAMKK2Q96RR4 588 aa23.19■■□□□ 1.3
SEH1L-202ENST00000399892 SLC39A6Q13433 755 aa23.18■■□□□ 1.3
SEH1L-202ENST00000399892 RBM42Q9BTD8 480 aaKnown RBP23.18■■□□□ 1.3
SEH1L-202ENST00000399892 LY75O60449 1722 aa23.18■■□□□ 1.3
SEH1L-202ENST00000399892 TXNRD1Q16881 649 aa23.17■■□□□ 1.3
SEH1L-202ENST00000399892 PTCD1O75127 700 aaKnown RBP23.17■■□□□ 1.3
SEH1L-202ENST00000399892 CALD1Q05682 793 aaKnown RBP23.17■■□□□ 1.3
SEH1L-202ENST00000399892 CCNL1Q9UK58 526 aaPredicted RBP23.17■■□□□ 1.3
SEH1L-202ENST00000399892 NGEFQ8N5V2 710 aa23.16■■□□□ 1.3
SEH1L-202ENST00000399892 LAS1LQ9Y4W2 734 aaKnown RBP23.16■■□□□ 1.3
SEH1L-202ENST00000399892 SLC27A3Q5K4L6 730 aa23.15■■□□□ 1.3
SEH1L-202ENST00000399892 ZNF790Q6PG37 636 aa23.15■■□□□ 1.3
SEH1L-202ENST00000399892 LOC102724428A0A0B4J2F2 783 aa23.15■■□□□ 1.3
SEH1L-202ENST00000399892 SIK1P57059 783 aa23.15■■□□□ 1.3
SEH1L-202ENST00000399892 CCDC27Q2M243 656 aa23.15■■□□□ 1.3
SEH1L-202ENST00000399892 PAPPAQ13219 1627 aa23.14■■□□□ 1.3
SEH1L-202ENST00000399892 NCBP3Q53F19 620 aaKnown RBP23.14■■□□□ 1.29
SEH1L-202ENST00000399892 MIS18AQ9NYP9 233 aa23.14■■□□□ 1.29
SEH1L-202ENST00000399892 WWC1Q8IX03 1113 aa23.13■■□□□ 1.29
SEH1L-202ENST00000399892 RREB1Q92766 1687 aa23.13■■□□□ 1.29
SEH1L-202ENST00000399892 ATP6V1AP38606 617 aa23.12■■□□□ 1.29
SEH1L-202ENST00000399892 KCNQ4P56696 695 aa23.12■■□□□ 1.29
SEH1L-202ENST00000399892 PROM2Q8N271 834 aa23.12■■□□□ 1.29
SEH1L-202ENST00000399892 TSPYL4Q9UJ04 414 aa23.12■■□□□ 1.29
SEH1L-202ENST00000399892 HMGB2P26583 209 aaKnown RBP23.12■■□□□ 1.29
SEH1L-202ENST00000399892 UBR2Q8IWV8 1755 aa23.1■■□□□ 1.29
SEH1L-202ENST00000399892 FMNL2Q96PY5 1086 aa23.1■■□□□ 1.29
SEH1L-202ENST00000399892 LRRC4BQ9NT99 713 aa23.1■■□□□ 1.29
SEH1L-202ENST00000399892 NUP188Q5SRE5 1749 aa23.09■■□□□ 1.29
SEH1L-202ENST00000399892 BABAM1Q9NWV8 329 aa23.09■■□□□ 1.29
SEH1L-202ENST00000399892 KDM3BQ7LBC6 1761 aa23.09■■□□□ 1.29
SEH1L-202ENST00000399892 KCNQ3O43525 872 aa23.08■■□□□ 1.29
SEH1L-202ENST00000399892 GNAI1P63096 354 aa23.08■■□□□ 1.29
SEH1L-202ENST00000399892 NBPF14Q5TI25 921 aa23.08■■□□□ 1.29
SEH1L-202ENST00000399892 ZNF496Q96IT1 587 aaPredicted RBP23.08■■□□□ 1.29
SEH1L-202ENST00000399892 CFAP44Q96MT7 982 aa23.08■■□□□ 1.29
SEH1L-202ENST00000399892 TAF1LQ8IZX4 1826 aa23.08■■□□□ 1.28
SEH1L-202ENST00000399892 C5P01031 1676 aa23.07■■□□□ 1.28
SEH1L-202ENST00000399892 KCPQ6ZWJ8 1503 aa23.07■■□□□ 1.28
SEH1L-202ENST00000399892 IFT57Q9NWB7 429 aa23.07■■□□□ 1.28
SEH1L-202ENST00000399892 HNRNPUQ00839 825 aaKnown RBP eCLIP23.06■■□□□ 1.28
SEH1L-202ENST00000399892 ZNF831Q5JPB2 1677 aa23.06■■□□□ 1.28
SEH1L-202ENST00000399892 CHL1O00533 1208 aa23.05■■□□□ 1.28
SEH1L-202ENST00000399892 WDR63Q8IWG1 891 aa23.05■■□□□ 1.28
SEH1L-202ENST00000399892 VSIG10Q8N0Z9 540 aa23.05■■□□□ 1.28
SEH1L-202ENST00000399892 SLC4A9Q96Q91 983 aa23.05■■□□□ 1.28
SEH1L-202ENST00000399892 HEG1Q9ULI3 1381 aa23.04■■□□□ 1.28
SEH1L-202ENST00000399892 ITPK1Q13572 414 aa23.03■■□□□ 1.28
SEH1L-202ENST00000399892 STK32BQ9NY57 414 aa23.03■■□□□ 1.28
SEH1L-202ENST00000399892 IL16Q14005 1332 aa23.03■■□□□ 1.28
SEH1L-202ENST00000399892 MBIPQ9NS73 344 aa23.03■■□□□ 1.28
SEH1L-202ENST00000399892 SNRPA1P09661 255 aaKnown RBP23.02■■□□□ 1.28
SEH1L-202ENST00000399892 DNAJC10Q8IXB1 793 aa23.02■■□□□ 1.28
SEH1L-202ENST00000399892 TEX13AQ9BXU3 409 aaPredicted RBP23.02■■□□□ 1.28
SEH1L-202ENST00000399892 TJP1Q07157 1748 aa23.02■■□□□ 1.27
SEH1L-202ENST00000399892 ZNF853P0CG23 659 aa23.01■■□□□ 1.27
SEH1L-202ENST00000399892 EIF4A1P60842 406 aaKnown RBP23.01■■□□□ 1.27
SEH1L-202ENST00000399892 LINC00116Q8NCU8 138 aa23.01■■□□□ 1.27
SEH1L-202ENST00000399892 AK7Q96M32 723 aa23.01■■□□□ 1.27
SEH1L-202ENST00000399892 STARD3NLO95772 234 aa23.01■■□□□ 1.27
SEH1L-202ENST00000399892 C4BP0C0L5 1744 aa23■■□□□ 1.27
SEH1L-202ENST00000399892 COL5A3P25940 1745 aaPredicted RBP23■■□□□ 1.27
SEH1L-202ENST00000399892 ANO8Q9HCE9 1232 aaPredicted RBP22.99■■□□□ 1.27
SEH1L-202ENST00000399892 TFCP2L1Q9NZI6 479 aa22.99■■□□□ 1.27
SEH1L-202ENST00000399892 CICQ96RK0 1608 aaPredicted RBP22.99■■□□□ 1.27
SEH1L-202ENST00000399892 GOLGA2Q08379 1002 aa22.98■■□□□ 1.27
SEH1L-202ENST00000399892 SLC15A2Q16348 729 aa22.98■■□□□ 1.27
SEH1L-202ENST00000399892 TSR2Q969E8 191 aaKnown RBP22.98■■□□□ 1.27
SEH1L-202ENST00000399892 ZNF521Q96K83 1311 aa22.98■■□□□ 1.27
SEH1L-202ENST00000399892 MYH16Q9H6N6 1097 aa22.98■■□□□ 1.27
SEH1L-202ENST00000399892 GIGYF1O75420 1035 aaPredicted RBP22.96■■□□□ 1.27
SEH1L-202ENST00000399892 CRKLP46109 303 aaKnown RBP22.96■■□□□ 1.27
SEH1L-202ENST00000399892 ZNF827Q17R98 1081 aa22.96■■□□□ 1.27
SEH1L-202ENST00000399892 AKT1S1Q96B36 256 aa22.96■■□□□ 1.27
SEH1L-202ENST00000399892 CNTNAP4Q9C0A0 1308 aa22.96■■□□□ 1.27
SEH1L-202ENST00000399892 PRAMEF22A3QJZ6 481 aa22.96■■□□□ 1.27
SEH1L-202ENST00000399892 GNPATO15228 680 aa22.96■■□□□ 1.27
SEH1L-202ENST00000399892 CYP19A1P11511 503 aaPredicted RBP22.96■■□□□ 1.27
SEH1L-202ENST00000399892 R3HDM1Q15032 1099 aaKnown RBP22.96■■□□□ 1.27
SEH1L-202ENST00000399892 MYH14Q7Z406 1995 aaKnown RBP22.95■■□□□ 1.26
SEH1L-202ENST00000399892 USP16Q9Y5T5 823 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms