RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 EIF5P55010 431 aaKnown RBP9.93□□□□□ -0.82
CACNA1C-220ENST00000399655 CAMK4Q16566 473 aa9.93□□□□□ -0.82
CACNA1C-220ENST00000399655 TTC31Q49AM3 519 aaPredicted RBP9.93□□□□□ -0.82
CACNA1C-220ENST00000399655 EIF2S2P20042 333 aaKnown RBP9.93□□□□□ -0.82
CACNA1C-220ENST00000399655 ZNF622Q969S3 477 aaKnown RBP eCLIP9.93□□□□□ -0.82
CACNA1C-220ENST00000399655 COPG1Q9Y678 874 aaKnown RBP9.93□□□□□ -0.82
CACNA1C-220ENST00000399655 PPFIA3O75145 1194 aa9.93□□□□□ -0.82
CACNA1C-220ENST00000399655 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.93□□□□□ -0.82
CACNA1C-220ENST00000399655 HSPA5P11021 654 aaKnown RBP9.93□□□□□ -0.82
CACNA1C-220ENST00000399655 BAZ2BQ9UIF8 2168 aaKnown RBP9.93□□□□□ -0.82
CACNA1C-220ENST00000399655 A0A1B0GW55 424 aa9.92□□□□□ -0.82
CACNA1C-220ENST00000399655 DUX4L2P0CJ85 424 aa9.92□□□□□ -0.82
CACNA1C-220ENST00000399655 DUX4L3P0CJ86 424 aa9.92□□□□□ -0.82
CACNA1C-220ENST00000399655 DUX4L4P0CJ87 422 aa9.92□□□□□ -0.82
CACNA1C-220ENST00000399655 DUX4L5P0CJ88 424 aa9.92□□□□□ -0.82
CACNA1C-220ENST00000399655 DUX4L6P0CJ89 424 aa9.92□□□□□ -0.82
CACNA1C-220ENST00000399655 DUX4L7P0CJ90 424 aa9.92□□□□□ -0.82
CACNA1C-220ENST00000399655 GFAPP14136 432 aa9.92□□□□□ -0.82
CACNA1C-220ENST00000399655 AFAP1L2Q8N4X5 818 aa9.92□□□□□ -0.82
CACNA1C-220ENST00000399655 DUX4Q9UBX2 424 aa9.92□□□□□ -0.82
CACNA1C-220ENST00000399655 CCDC121Q6ZUS5 278 aa9.92□□□□□ -0.82
CACNA1C-220ENST00000399655 TRIM55Q9BYV6 548 aa9.92□□□□□ -0.82
CACNA1C-220ENST00000399655 THEGQ9P2T0 379 aa9.92□□□□□ -0.82
CACNA1C-220ENST00000399655 IRX4P78413 519 aa9.92□□□□□ -0.82
CACNA1C-220ENST00000399655 CCDC178Q5BJE1 867 aa9.92□□□□□ -0.82
CACNA1C-220ENST00000399655 CTNNBL1Q8WYA6 563 aaPredicted RBP9.92□□□□□ -0.82
CACNA1C-220ENST00000399655 CDKL5O76039 1030 aa9.92□□□□□ -0.82
CACNA1C-220ENST00000399655 CCDC57Q2TAC2 916 aa9.92□□□□□ -0.82
CACNA1C-220ENST00000399655 TACC3Q9Y6A5 838 aa9.92□□□□□ -0.82
CACNA1C-220ENST00000399655 USP37Q86T82 979 aa9.92□□□□□ -0.82
CACNA1C-220ENST00000399655 CCDC82Q8N4S0 544 aa9.92□□□□□ -0.82
CACNA1C-220ENST00000399655 FMNL3Q8IVF7 1028 aa9.92□□□□□ -0.82
CACNA1C-220ENST00000399655 HSF2BPO75031 334 aa9.92□□□□□ -0.82
CACNA1C-220ENST00000399655 C9orf78Q9NZ63 289 aaPredicted RBP9.92□□□□□ -0.82
CACNA1C-220ENST00000399655 SERPINI2O75830 405 aa9.92□□□□□ -0.82
CACNA1C-220ENST00000399655 ANKRD1Q15327 319 aa9.92□□□□□ -0.82
CACNA1C-220ENST00000399655 CFAP65Q6ZU64 1925 aaKnown RBP9.91□□□□□ -0.82
CACNA1C-220ENST00000399655 LRSAM1Q6UWE0 723 aa9.91□□□□□ -0.82
CACNA1C-220ENST00000399655 CCDC170Q8IYT3 715 aa9.91□□□□□ -0.82
CACNA1C-220ENST00000399655 ARHGAP24Q8N264 748 aa9.91□□□□□ -0.82
CACNA1C-220ENST00000399655 MAP3K21Q5TCX8 1036 aa9.91□□□□□ -0.82
CACNA1C-220ENST00000399655 U2AF1L5P0DN76 240 aaPredicted RBP9.91□□□□□ -0.82
CACNA1C-220ENST00000399655 PRPHP41219 470 aa9.91□□□□□ -0.82
CACNA1C-220ENST00000399655 U2AF1Q01081 240 aaKnown RBP eCLIP9.91□□□□□ -0.82
CACNA1C-220ENST00000399655 LRRC43Q8N309 656 aa9.91□□□□□ -0.82
CACNA1C-220ENST00000399655 NOL7Q9UMY1 257 aaKnown RBP9.91□□□□□ -0.82
CACNA1C-220ENST00000399655 FERMT2Q96AC1 680 aa9.91□□□□□ -0.82
CACNA1C-220ENST00000399655 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.91□□□□□ -0.82
CACNA1C-220ENST00000399655 IBSPP21815 317 aaPredicted RBP9.91□□□□□ -0.82
CACNA1C-220ENST00000399655 A0A1B0GUL7 405 aa9.91□□□□□ -0.82
CACNA1C-220ENST00000399655 E9PMD0 336 aa9.91□□□□□ -0.82
CACNA1C-220ENST00000399655 CTAGE5O15320 804 aa9.91□□□□□ -0.82
CACNA1C-220ENST00000399655 CEBPZQ03701 1054 aaKnown RBP9.91□□□□□ -0.82
CACNA1C-220ENST00000399655 CACTINQ8WUQ7 758 aaKnown RBP9.91□□□□□ -0.82
CACNA1C-220ENST00000399655 DDX58O95786 925 aaKnown RBP9.91□□□□□ -0.82
CACNA1C-220ENST00000399655 LMNB2Q03252 620 aa9.91□□□□□ -0.82
CACNA1C-220ENST00000399655 NAA25Q14CX7 972 aa9.91□□□□□ -0.82
CACNA1C-220ENST00000399655 XAB2Q9HCS7 855 aaKnown RBP9.91□□□□□ -0.82
CACNA1C-220ENST00000399655 ATAD2Q6PL18 1390 aa9.91□□□□□ -0.82
CACNA1C-220ENST00000399655 LMAN1P49257 510 aa9.9□□□□□ -0.82
CACNA1C-220ENST00000399655 GABPB2Q8TAK5 448 aaPredicted RBP9.9□□□□□ -0.82
CACNA1C-220ENST00000399655 ZRANB2O95218 330 aaKnown RBP eCLIP9.9□□□□□ -0.82
CACNA1C-220ENST00000399655 CFAP157Q5JU67 520 aa9.9□□□□□ -0.82
CACNA1C-220ENST00000399655 A6NNZ2 444 aa9.9□□□□□ -0.82
CACNA1C-220ENST00000399655 SFPQP23246 707 aaKnown RBP eCLIP9.9□□□□□ -0.82
CACNA1C-220ENST00000399655 TUBB8Q3ZCM7 444 aa9.9□□□□□ -0.82
CACNA1C-220ENST00000399655 CEP57Q86XR8 500 aa9.9□□□□□ -0.82
CACNA1C-220ENST00000399655 TNMDQ9H2S6 317 aa9.9□□□□□ -0.82
CACNA1C-220ENST00000399655 ATP2A2P16615 1042 aaKnown RBP9.9□□□□□ -0.82
CACNA1C-220ENST00000399655 MSANTD4Q8NCY6 345 aa9.9□□□□□ -0.82
CACNA1C-220ENST00000399655 USP6NLQ92738 828 aa9.9□□□□□ -0.82
CACNA1C-220ENST00000399655 CTAGE1Q96RT6 745 aa9.9□□□□□ -0.82
CACNA1C-220ENST00000399655 TRIM7Q9C029 511 aa9.9□□□□□ -0.82
CACNA1C-220ENST00000399655 STK38Q15208 465 aa9.9□□□□□ -0.83
CACNA1C-220ENST00000399655 PTPN14Q15678 1187 aa9.9□□□□□ -0.83
CACNA1C-220ENST00000399655 ERCC3P19447 782 aa9.9□□□□□ -0.83
CACNA1C-220ENST00000399655 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.9□□□□□ -0.83
CACNA1C-220ENST00000399655 DIABLOQ9NR28 239 aa9.89□□□□□ -0.83
CACNA1C-220ENST00000399655 GAS8O95995 478 aa9.89□□□□□ -0.83
CACNA1C-220ENST00000399655 TERF1P54274 439 aa9.89□□□□□ -0.83
CACNA1C-220ENST00000399655 NEMFO60524 1076 aa9.89□□□□□ -0.83
CACNA1C-220ENST00000399655 HLTFQ14527 1009 aaKnown RBP eCLIP9.89□□□□□ -0.83
CACNA1C-220ENST00000399655 SPATS2LQ9NUQ6 558 aaKnown RBP9.89□□□□□ -0.83
CACNA1C-220ENST00000399655 FHAD1B1AJZ9 1412 aa9.89□□□□□ -0.83
CACNA1C-220ENST00000399655 LMNAP02545 664 aaKnown RBP9.89□□□□□ -0.83
CACNA1C-220ENST00000399655 ANKRD24Q8TF21 1146 aa9.89□□□□□ -0.83
CACNA1C-220ENST00000399655 WDHD1O75717 1129 aaPredicted RBP9.89□□□□□ -0.83
CACNA1C-220ENST00000399655 TSG101Q99816 390 aa9.89□□□□□ -0.83
CACNA1C-220ENST00000399655 PFDN4Q9NQP4 134 aa9.89□□□□□ -0.83
CACNA1C-220ENST00000399655 CTAGE9A4FU28 777 aa9.89□□□□□ -0.83
CACNA1C-220ENST00000399655 G3BP1Q13283 466 aaKnown RBP eCLIP9.89□□□□□ -0.83
CACNA1C-220ENST00000399655 ROCK2O75116 1388 aaKnown RBP9.89□□□□□ -0.83
CACNA1C-220ENST00000399655 SLMAPQ14BN4 828 aa9.89□□□□□ -0.83
CACNA1C-220ENST00000399655 ANKRD45Q5TZF3 282 aa9.89□□□□□ -0.83
CACNA1C-220ENST00000399655 CCDC114Q96M63 670 aa9.89□□□□□ -0.83
CACNA1C-220ENST00000399655 CCDC68Q9H2F9 335 aa9.89□□□□□ -0.83
CACNA1C-220ENST00000399655 CCT6BQ92526 530 aa9.88□□□□□ -0.83
CACNA1C-220ENST00000399655 RGL3Q3MIN7 710 aa9.88□□□□□ -0.83
CACNA1C-220ENST00000399655 RBBP5Q15291 538 aaKnown RBP9.88□□□□□ -0.83
CACNA1C-220ENST00000399655 TTC21AQ8NDW8 1320 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 144.6 ms