RNA–Protein interactions for RNA: ENST00000399644.5

CACNA1C-218, Transcript of calcium voltage-gated channel subunit alpha1 C, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-218	ENST00000399644	FIBP	O43427	364 aa		12.97	□□□□□ -0.33
CACNA1C-218	ENST00000399644	MICALCL	Q6ZW33	695 aa		12.97	□□□□□ -0.33
CACNA1C-218	ENST00000399644	ARID4A	P29374	1257 aa	Predicted RBP	12.96	□□□□□ -0.33
CACNA1C-218	ENST00000399644	ZNF287	Q9HBT7	754 aa		12.96	□□□□□ -0.33
CACNA1C-218	ENST00000399644	GNL1	P36915	607 aa	Predicted RBP	12.96	□□□□□ -0.33
CACNA1C-218	ENST00000399644	JDP2	Q8WYK2	163 aa		12.96	□□□□□ -0.33
CACNA1C-218	ENST00000399644	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	12.96	□□□□□ -0.33
CACNA1C-218	ENST00000399644	PARP3	Q9Y6F1	533 aa		12.96	□□□□□ -0.33
CACNA1C-218	ENST00000399644	AQR	O60306	1485 aa	Known RBP eCLIP	12.96	□□□□□ -0.33
CACNA1C-218	ENST00000399644	PRPF40A	O75400	957 aa	Known RBP	12.96	□□□□□ -0.33
CACNA1C-218	ENST00000399644	STK38	Q15208	465 aa		12.96	□□□□□ -0.33
CACNA1C-218	ENST00000399644	SLF2	Q8IX21	1173 aa		12.96	□□□□□ -0.33
CACNA1C-218	ENST00000399644	FKBP4	Q02790	459 aa	Known RBP eCLIP	12.96	□□□□□ -0.33
CACNA1C-218	ENST00000399644	ZNF692	Q9BU19	519 aa	Predicted RBP	12.96	□□□□□ -0.33
CACNA1C-218	ENST00000399644	REC8	O95072	547 aa		12.96	□□□□□ -0.34
CACNA1C-218	ENST00000399644	KCNH5	Q8NCM2	988 aa		12.96	□□□□□ -0.34
CACNA1C-218	ENST00000399644	DACT3	Q96B18	629 aa	Predicted RBP	12.96	□□□□□ -0.34
CACNA1C-218	ENST00000399644	TSNARE1	Q96NA8	513 aa		12.96	□□□□□ -0.34
CACNA1C-218	ENST00000399644	FEZ2	Q9UHY8	353 aa	Predicted RBP	12.96	□□□□□ -0.34
CACNA1C-218	ENST00000399644	HOOK3	Q86VS8	718 aa		12.95	□□□□□ -0.34
CACNA1C-218	ENST00000399644	PDIA4	P13667	645 aa	Known RBP	12.95	□□□□□ -0.34
CACNA1C-218	ENST00000399644	CNTROB	Q8N137	903 aa		12.95	□□□□□ -0.34
CACNA1C-218	ENST00000399644	MSH6	P52701	1360 aa		12.95	□□□□□ -0.34
CACNA1C-218	ENST00000399644	SEPT8	Q92599	483 aa		12.95	□□□□□ -0.34
CACNA1C-218	ENST00000399644	CUL5	Q93034	780 aa		12.95	□□□□□ -0.34
CACNA1C-218	ENST00000399644	EIF5	P55010	431 aa	Known RBP	12.95	□□□□□ -0.34
CACNA1C-218	ENST00000399644	LUC7L	Q9NQ29	371 aa	Known RBP	12.95	□□□□□ -0.34
CACNA1C-218	ENST00000399644	PUF60	Q9UHX1	559 aa	Known RBP	12.95	□□□□□ -0.34
CACNA1C-218	ENST00000399644	STIM1	Q13586	685 aa		12.94	□□□□□ -0.34
CACNA1C-218	ENST00000399644	PPP1R9B	Q96SB3	815 aa		12.94	□□□□□ -0.34
CACNA1C-218	ENST00000399644	KIF15	Q9NS87	1388 aa		12.94	□□□□□ -0.34
CACNA1C-218	ENST00000399644	POTEJ	P0CG39	1038 aa		12.94	□□□□□ -0.34
CACNA1C-218	ENST00000399644	PDE4A	P27815	886 aa		12.94	□□□□□ -0.34
CACNA1C-218	ENST00000399644	MMRN2	Q9H8L6	949 aa		12.94	□□□□□ -0.34
CACNA1C-218	ENST00000399644	SURF6	O75683	361 aa	Known RBP	12.94	□□□□□ -0.34
CACNA1C-218	ENST00000399644	HDGFL1	Q5TGJ6	251 aa		12.94	□□□□□ -0.34
CACNA1C-218	ENST00000399644	FAM114A1	Q8IWE2	563 aa		12.94	□□□□□ -0.34
CACNA1C-218	ENST00000399644	TCHP	Q9BT92	498 aa		12.94	□□□□□ -0.34
CACNA1C-218	ENST00000399644	NDC80	O14777	642 aa		12.94	□□□□□ -0.34
CACNA1C-218	ENST00000399644	KIF5C	O60282	957 aa		12.94	□□□□□ -0.34
CACNA1C-218	ENST00000399644	SPTY2D1	Q68D10	685 aa	Predicted RBP	12.94	□□□□□ -0.34
CACNA1C-218	ENST00000399644	LRSAM1	Q6UWE0	723 aa		12.94	□□□□□ -0.34
CACNA1C-218	ENST00000399644	ATF7IP	Q6VMQ6	1270 aa		12.93	□□□□□ -0.34
CACNA1C-218	ENST00000399644	LRRC43	Q8N309	656 aa		12.93	□□□□□ -0.34
CACNA1C-218	ENST00000399644	MKNK2	Q9HBH9	465 aa		12.93	□□□□□ -0.34
CACNA1C-218	ENST00000399644	GJA3	Q9Y6H8	435 aa		12.93	□□□□□ -0.34
CACNA1C-218	ENST00000399644	CEBPA	P49715	358 aa	Predicted RBP	12.93	□□□□□ -0.34
CACNA1C-218	ENST00000399644	PRPF4B	Q13523	1007 aa	Known RBP	12.93	□□□□□ -0.34
CACNA1C-218	ENST00000399644	PPP4R4	Q6NUP7	873 aa		12.93	□□□□□ -0.34
CACNA1C-218	ENST00000399644	DDX46	Q7L014	1031 aa	Known RBP	12.93	□□□□□ -0.34
CACNA1C-218	ENST00000399644	EHMT1	Q9H9B1	1298 aa		12.93	□□□□□ -0.34
CACNA1C-218	ENST00000399644	CABP5	Q9NP86	173 aa		12.93	□□□□□ -0.34
CACNA1C-218	ENST00000399644	OGFOD1	Q8N543	542 aa		12.93	□□□□□ -0.34
CACNA1C-218	ENST00000399644	NOL3	O60936	208 aa	Known RBP	12.92	□□□□□ -0.34
CACNA1C-218	ENST00000399644	SEPT14	Q6ZU15	432 aa		12.92	□□□□□ -0.34
CACNA1C-218	ENST00000399644	ACSBG1	Q96GR2	724 aa		12.92	□□□□□ -0.34
CACNA1C-218	ENST00000399644	GIGYF2	Q6Y7W6	1299 aa	Known RBP	12.92	□□□□□ -0.34
CACNA1C-218	ENST00000399644	RTEL1-TNFRSF6B	F6WH68	1400 aa		12.92	□□□□□ -0.34
CACNA1C-218	ENST00000399644	GCOM1	H8Y6P7	765 aa	Predicted RBP	12.92	□□□□□ -0.34
CACNA1C-218	ENST00000399644	MYZAP	P0CAP1	466 aa		12.92	□□□□□ -0.34
CACNA1C-218	ENST00000399644	CCDC148	Q8NFR7	591 aa		12.92	□□□□□ -0.34
CACNA1C-218	ENST00000399644	PSMA5	P28066	241 aa		12.92	□□□□□ -0.34
CACNA1C-218	ENST00000399644	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	12.92	□□□□□ -0.34
CACNA1C-218	ENST00000399644	IQCE	Q6IPM2	695 aa		12.92	□□□□□ -0.34
CACNA1C-218	ENST00000399644	CRACR2A	Q9BSW2	395 aa		12.92	□□□□□ -0.34
CACNA1C-218	ENST00000399644	SEC63	Q9UGP8	760 aa	Known RBP	12.92	□□□□□ -0.34
CACNA1C-218	ENST00000399644	DDX19B	Q9UMR2	479 aa		12.92	□□□□□ -0.34
CACNA1C-218	ENST00000399644	RAD54L2	Q9Y4B4	1467 aa		12.91	□□□□□ -0.34
CACNA1C-218	ENST00000399644	METTL24	Q5JXM2	366 aa		12.91	□□□□□ -0.34
CACNA1C-218	ENST00000399644	UBAC1	Q9BSL1	405 aa		12.91	□□□□□ -0.34
CACNA1C-218	ENST00000399644	CCDC63	Q8NA47	563 aa		12.91	□□□□□ -0.34
CACNA1C-218	ENST00000399644	FBF1	Q8TES7	1133 aa		12.91	□□□□□ -0.34
CACNA1C-218	ENST00000399644	BRPF3	Q9ULD4	1205 aa		12.91	□□□□□ -0.34
CACNA1C-218	ENST00000399644	LUZP1	Q86V48	1076 aa		12.91	□□□□□ -0.34
CACNA1C-218	ENST00000399644	BMP2K	Q9NSY1	1161 aa	Predicted RBP	12.91	□□□□□ -0.34
CACNA1C-218	ENST00000399644	FOXO3	O43524	673 aa		12.91	□□□□□ -0.34
CACNA1C-218	ENST00000399644	TRIM22	Q8IYM9	498 aa		12.91	□□□□□ -0.34
CACNA1C-218	ENST00000399644	ERCC5	P28715	1186 aa	Predicted RBP	12.91	□□□□□ -0.34
CACNA1C-218	ENST00000399644	CASQ1	P31415	396 aa		12.91	□□□□□ -0.34
CACNA1C-218	ENST00000399644	CCDC6	Q16204	474 aa		12.91	□□□□□ -0.34
CACNA1C-218	ENST00000399644	SULT6B1	Q6IMI4	303 aa		12.91	□□□□□ -0.34
CACNA1C-218	ENST00000399644	LCA5	Q86VQ0	697 aa		12.91	□□□□□ -0.34
CACNA1C-218	ENST00000399644	CGN	Q9P2M7	1197 aa	Known RBP	12.91	□□□□□ -0.34
CACNA1C-218	ENST00000399644	ME1	P48163	572 aa		12.9	□□□□□ -0.34
CACNA1C-218	ENST00000399644	EXOC6	Q8TAG9	804 aa		12.9	□□□□□ -0.34
CACNA1C-218	ENST00000399644	CEP126	Q9P2H0	1117 aa		12.9	□□□□□ -0.34
CACNA1C-218	ENST00000399644	IKBKG	Q9Y6K9	419 aa		12.9	□□□□□ -0.34
CACNA1C-218	ENST00000399644	APAF1	O14727	1248 aa		12.9	□□□□□ -0.34
CACNA1C-218	ENST00000399644	RUNDC1	Q96C34	613 aa		12.9	□□□□□ -0.34
CACNA1C-218	ENST00000399644	DZIP1L	Q8IYY4	767 aa	Known RBP	12.9	□□□□□ -0.34
CACNA1C-218	ENST00000399644	SCAPER	Q9BY12	1400 aa		12.9	□□□□□ -0.34
CACNA1C-218	ENST00000399644	INTS3	Q68E01	1043 aa	Known RBP	12.9	□□□□□ -0.34
CACNA1C-218	ENST00000399644		A0A087WZG4	1122 aa		12.9	□□□□□ -0.34
CACNA1C-218	ENST00000399644	MAATS1	Q7Z4T9	603 aa		12.9	□□□□□ -0.34
CACNA1C-218	ENST00000399644	CEP120	Q8N960	986 aa		12.9	□□□□□ -0.34
CACNA1C-218	ENST00000399644	LNPK	Q9C0E8	428 aa		12.9	□□□□□ -0.34
CACNA1C-218	ENST00000399644	GNAI3	P08754	354 aa		12.89	□□□□□ -0.35
CACNA1C-218	ENST00000399644	IFIT1	P09914	478 aa	Known RBP	12.89	□□□□□ -0.35
CACNA1C-218	ENST00000399644	C6orf163	Q5TEZ5	329 aa		12.89	□□□□□ -0.35
CACNA1C-218	ENST00000399644	IDH1	O75874	414 aa	Known RBP	12.89	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms