RNA–Protein interactions for RNA: ENST00000399601.5

CACNA1C-208, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-208ENST00000399601 FIBPO43427 364 aa12.97□□□□□ -0.33
CACNA1C-208ENST00000399601 MICALCLQ6ZW33 695 aa12.97□□□□□ -0.33
CACNA1C-208ENST00000399601 ARID4AP29374 1257 aaPredicted RBP12.96□□□□□ -0.33
CACNA1C-208ENST00000399601 ZNF287Q9HBT7 754 aa12.96□□□□□ -0.33
CACNA1C-208ENST00000399601 GNL1P36915 607 aaPredicted RBP12.96□□□□□ -0.33
CACNA1C-208ENST00000399601 JDP2Q8WYK2 163 aa12.96□□□□□ -0.33
CACNA1C-208ENST00000399601 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.96□□□□□ -0.33
CACNA1C-208ENST00000399601 PARP3Q9Y6F1 533 aa12.96□□□□□ -0.33
CACNA1C-208ENST00000399601 AQRO60306 1485 aaKnown RBP eCLIP12.96□□□□□ -0.33
CACNA1C-208ENST00000399601 PRPF40AO75400 957 aaKnown RBP12.96□□□□□ -0.33
CACNA1C-208ENST00000399601 STK38Q15208 465 aa12.96□□□□□ -0.33
CACNA1C-208ENST00000399601 SLF2Q8IX21 1173 aa12.96□□□□□ -0.33
CACNA1C-208ENST00000399601 FKBP4Q02790 459 aaKnown RBP eCLIP12.96□□□□□ -0.33
CACNA1C-208ENST00000399601 ZNF692Q9BU19 519 aaPredicted RBP12.96□□□□□ -0.33
CACNA1C-208ENST00000399601 REC8O95072 547 aa12.96□□□□□ -0.34
CACNA1C-208ENST00000399601 KCNH5Q8NCM2 988 aa12.96□□□□□ -0.34
CACNA1C-208ENST00000399601 DACT3Q96B18 629 aaPredicted RBP12.96□□□□□ -0.34
CACNA1C-208ENST00000399601 TSNARE1Q96NA8 513 aa12.96□□□□□ -0.34
CACNA1C-208ENST00000399601 FEZ2Q9UHY8 353 aaPredicted RBP12.96□□□□□ -0.34
CACNA1C-208ENST00000399601 HOOK3Q86VS8 718 aa12.95□□□□□ -0.34
CACNA1C-208ENST00000399601 PDIA4P13667 645 aaKnown RBP12.95□□□□□ -0.34
CACNA1C-208ENST00000399601 CNTROBQ8N137 903 aa12.95□□□□□ -0.34
CACNA1C-208ENST00000399601 MSH6P52701 1360 aa12.95□□□□□ -0.34
CACNA1C-208ENST00000399601 SEPT8Q92599 483 aa12.95□□□□□ -0.34
CACNA1C-208ENST00000399601 CUL5Q93034 780 aa12.95□□□□□ -0.34
CACNA1C-208ENST00000399601 EIF5P55010 431 aaKnown RBP12.95□□□□□ -0.34
CACNA1C-208ENST00000399601 LUC7LQ9NQ29 371 aaKnown RBP12.95□□□□□ -0.34
CACNA1C-208ENST00000399601 PUF60Q9UHX1 559 aaKnown RBP12.95□□□□□ -0.34
CACNA1C-208ENST00000399601 STIM1Q13586 685 aa12.94□□□□□ -0.34
CACNA1C-208ENST00000399601 PPP1R9BQ96SB3 815 aa12.94□□□□□ -0.34
CACNA1C-208ENST00000399601 KIF15Q9NS87 1388 aa12.94□□□□□ -0.34
CACNA1C-208ENST00000399601 POTEJP0CG39 1038 aa12.94□□□□□ -0.34
CACNA1C-208ENST00000399601 PDE4AP27815 886 aa12.94□□□□□ -0.34
CACNA1C-208ENST00000399601 MMRN2Q9H8L6 949 aa12.94□□□□□ -0.34
CACNA1C-208ENST00000399601 SURF6O75683 361 aaKnown RBP12.94□□□□□ -0.34
CACNA1C-208ENST00000399601 HDGFL1Q5TGJ6 251 aa12.94□□□□□ -0.34
CACNA1C-208ENST00000399601 FAM114A1Q8IWE2 563 aa12.94□□□□□ -0.34
CACNA1C-208ENST00000399601 TCHPQ9BT92 498 aa12.94□□□□□ -0.34
CACNA1C-208ENST00000399601 NDC80O14777 642 aa12.94□□□□□ -0.34
CACNA1C-208ENST00000399601 KIF5CO60282 957 aa12.94□□□□□ -0.34
CACNA1C-208ENST00000399601 SPTY2D1Q68D10 685 aaPredicted RBP12.94□□□□□ -0.34
CACNA1C-208ENST00000399601 LRSAM1Q6UWE0 723 aa12.94□□□□□ -0.34
CACNA1C-208ENST00000399601 ATF7IPQ6VMQ6 1270 aa12.93□□□□□ -0.34
CACNA1C-208ENST00000399601 LRRC43Q8N309 656 aa12.93□□□□□ -0.34
CACNA1C-208ENST00000399601 MKNK2Q9HBH9 465 aa12.93□□□□□ -0.34
CACNA1C-208ENST00000399601 GJA3Q9Y6H8 435 aa12.93□□□□□ -0.34
CACNA1C-208ENST00000399601 CEBPAP49715 358 aaPredicted RBP12.93□□□□□ -0.34
CACNA1C-208ENST00000399601 PRPF4BQ13523 1007 aaKnown RBP12.93□□□□□ -0.34
CACNA1C-208ENST00000399601 PPP4R4Q6NUP7 873 aa12.93□□□□□ -0.34
CACNA1C-208ENST00000399601 DDX46Q7L014 1031 aaKnown RBP12.93□□□□□ -0.34
CACNA1C-208ENST00000399601 EHMT1Q9H9B1 1298 aa12.93□□□□□ -0.34
CACNA1C-208ENST00000399601 CABP5Q9NP86 173 aa12.93□□□□□ -0.34
CACNA1C-208ENST00000399601 OGFOD1Q8N543 542 aa12.93□□□□□ -0.34
CACNA1C-208ENST00000399601 NOL3O60936 208 aaKnown RBP12.92□□□□□ -0.34
CACNA1C-208ENST00000399601 SEPT14Q6ZU15 432 aa12.92□□□□□ -0.34
CACNA1C-208ENST00000399601 ACSBG1Q96GR2 724 aa12.92□□□□□ -0.34
CACNA1C-208ENST00000399601 GIGYF2Q6Y7W6 1299 aaKnown RBP12.92□□□□□ -0.34
CACNA1C-208ENST00000399601 RTEL1-TNFRSF6BF6WH68 1400 aa12.92□□□□□ -0.34
CACNA1C-208ENST00000399601 GCOM1H8Y6P7 765 aaPredicted RBP12.92□□□□□ -0.34
CACNA1C-208ENST00000399601 MYZAPP0CAP1 466 aa12.92□□□□□ -0.34
CACNA1C-208ENST00000399601 CCDC148Q8NFR7 591 aa12.92□□□□□ -0.34
CACNA1C-208ENST00000399601 PSMA5P28066 241 aa12.92□□□□□ -0.34
CACNA1C-208ENST00000399601 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.92□□□□□ -0.34
CACNA1C-208ENST00000399601 IQCEQ6IPM2 695 aa12.92□□□□□ -0.34
CACNA1C-208ENST00000399601 CRACR2AQ9BSW2 395 aa12.92□□□□□ -0.34
CACNA1C-208ENST00000399601 SEC63Q9UGP8 760 aaKnown RBP12.92□□□□□ -0.34
CACNA1C-208ENST00000399601 DDX19BQ9UMR2 479 aa12.92□□□□□ -0.34
CACNA1C-208ENST00000399601 RAD54L2Q9Y4B4 1467 aa12.91□□□□□ -0.34
CACNA1C-208ENST00000399601 METTL24Q5JXM2 366 aa12.91□□□□□ -0.34
CACNA1C-208ENST00000399601 UBAC1Q9BSL1 405 aa12.91□□□□□ -0.34
CACNA1C-208ENST00000399601 CCDC63Q8NA47 563 aa12.91□□□□□ -0.34
CACNA1C-208ENST00000399601 FBF1Q8TES7 1133 aa12.91□□□□□ -0.34
CACNA1C-208ENST00000399601 BRPF3Q9ULD4 1205 aa12.91□□□□□ -0.34
CACNA1C-208ENST00000399601 LUZP1Q86V48 1076 aa12.91□□□□□ -0.34
CACNA1C-208ENST00000399601 BMP2KQ9NSY1 1161 aaPredicted RBP12.91□□□□□ -0.34
CACNA1C-208ENST00000399601 FOXO3O43524 673 aa12.91□□□□□ -0.34
CACNA1C-208ENST00000399601 TRIM22Q8IYM9 498 aa12.91□□□□□ -0.34
CACNA1C-208ENST00000399601 ERCC5P28715 1186 aaPredicted RBP12.91□□□□□ -0.34
CACNA1C-208ENST00000399601 CASQ1P31415 396 aa12.91□□□□□ -0.34
CACNA1C-208ENST00000399601 CCDC6Q16204 474 aa12.91□□□□□ -0.34
CACNA1C-208ENST00000399601 SULT6B1Q6IMI4 303 aa12.91□□□□□ -0.34
CACNA1C-208ENST00000399601 LCA5Q86VQ0 697 aa12.91□□□□□ -0.34
CACNA1C-208ENST00000399601 CGNQ9P2M7 1197 aaKnown RBP12.91□□□□□ -0.34
CACNA1C-208ENST00000399601 ME1P48163 572 aa12.9□□□□□ -0.34
CACNA1C-208ENST00000399601 EXOC6Q8TAG9 804 aa12.9□□□□□ -0.34
CACNA1C-208ENST00000399601 CEP126Q9P2H0 1117 aa12.9□□□□□ -0.34
CACNA1C-208ENST00000399601 IKBKGQ9Y6K9 419 aa12.9□□□□□ -0.34
CACNA1C-208ENST00000399601 APAF1O14727 1248 aa12.9□□□□□ -0.34
CACNA1C-208ENST00000399601 RUNDC1Q96C34 613 aa12.9□□□□□ -0.34
CACNA1C-208ENST00000399601 DZIP1LQ8IYY4 767 aaKnown RBP12.9□□□□□ -0.34
CACNA1C-208ENST00000399601 SCAPERQ9BY12 1400 aa12.9□□□□□ -0.34
CACNA1C-208ENST00000399601 INTS3Q68E01 1043 aaKnown RBP12.9□□□□□ -0.34
CACNA1C-208ENST00000399601 A0A087WZG4 1122 aa12.9□□□□□ -0.34
CACNA1C-208ENST00000399601 MAATS1Q7Z4T9 603 aa12.9□□□□□ -0.34
CACNA1C-208ENST00000399601 CEP120Q8N960 986 aa12.9□□□□□ -0.34
CACNA1C-208ENST00000399601 LNPKQ9C0E8 428 aa12.9□□□□□ -0.34
CACNA1C-208ENST00000399601 GNAI3P08754 354 aa12.89□□□□□ -0.35
CACNA1C-208ENST00000399601 IFIT1P09914 478 aaKnown RBP12.89□□□□□ -0.35
CACNA1C-208ENST00000399601 C6orf163Q5TEZ5 329 aa12.89□□□□□ -0.35
CACNA1C-208ENST00000399601 IDH1O75874 414 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms