RNA–Protein interactions for RNA: ENST00000399600.8

SCIMP-201, Transcript of SLP adaptor and CSK interacting membrane protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCIMP, Length 1,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCIMP-201ENST00000399600 SLC27A3Q5K4L6 730 aa12.24□□□□□ -0.45
SCIMP-201ENST00000399600 TMOD3Q9NYL9 352 aa12.24□□□□□ -0.45
SCIMP-201ENST00000399600 ASAP1Q9ULH1 1129 aa12.24□□□□□ -0.45
SCIMP-201ENST00000399600 RNMTO43148 476 aaKnown RBP12.23□□□□□ -0.45
SCIMP-201ENST00000399600 NFATC2IPQ8NCF5 419 aa12.23□□□□□ -0.45
SCIMP-201ENST00000399600 SMARCC1Q92922 1105 aaPredicted RBP12.23□□□□□ -0.45
SCIMP-201ENST00000399600 ANO8Q9HCE9 1232 aaPredicted RBP12.23□□□□□ -0.45
SCIMP-201ENST00000399600 ATG3Q9NT62 314 aa12.23□□□□□ -0.45
SCIMP-201ENST00000399600 TAF1LQ8IZX4 1826 aa12.23□□□□□ -0.45
SCIMP-201ENST00000399600 ADAMTS7Q9UKP4 1686 aa12.22□□□□□ -0.45
SCIMP-201ENST00000399600 CABP4P57796 275 aa12.22□□□□□ -0.45
SCIMP-201ENST00000399600 GAS2L2Q8NHY3 880 aa12.22□□□□□ -0.45
SCIMP-201ENST00000399600 PLEKHF1Q96S99 279 aa12.22□□□□□ -0.45
SCIMP-201ENST00000399600 DLG5Q8TDM6 1919 aa12.21□□□□□ -0.45
SCIMP-201ENST00000399600 PALLDQ8WX93 1383 aa12.21□□□□□ -0.45
SCIMP-201ENST00000399600 GNAT3A8MTJ3 354 aa12.21□□□□□ -0.45
SCIMP-201ENST00000399600 SLC15A2Q16348 729 aa12.21□□□□□ -0.45
SCIMP-201ENST00000399600 IL17REQ8NFR9 667 aa12.21□□□□□ -0.45
SCIMP-201ENST00000399600 CCNL1Q9UK58 526 aaPredicted RBP12.21□□□□□ -0.45
SCIMP-201ENST00000399600 PAPPAQ13219 1627 aa12.21□□□□□ -0.46
SCIMP-201ENST00000399600 AKT1S1Q96B36 256 aa12.2□□□□□ -0.46
SCIMP-201ENST00000399600 SLC52A2Q9HAB3 445 aa12.2□□□□□ -0.46
SCIMP-201ENST00000399600 MAP3K5Q99683 1374 aa12.19□□□□□ -0.46
SCIMP-201ENST00000399600 LOC102724428A0A0B4J2F2 783 aa12.19□□□□□ -0.46
SCIMP-201ENST00000399600 SIK1P57059 783 aa12.19□□□□□ -0.46
SCIMP-201ENST00000399600 STK32BQ9NY57 414 aa12.19□□□□□ -0.46
SCIMP-201ENST00000399600 C1QBPQ07021 282 aaKnown RBP12.18□□□□□ -0.46
SCIMP-201ENST00000399600 ZNF827Q17R98 1081 aa12.18□□□□□ -0.46
SCIMP-201ENST00000399600 SLC4A9Q96Q91 983 aa12.18□□□□□ -0.46
SCIMP-201ENST00000399600 PDGFDQ9GZP0 370 aaPredicted RBP12.18□□□□□ -0.46
SCIMP-201ENST00000399600 PNNQ9H307 717 aaKnown RBP12.18□□□□□ -0.46
SCIMP-201ENST00000399600 PPP1R1BQ9UD71 204 aaPredicted RBP12.18□□□□□ -0.46
SCIMP-201ENST00000399600 SIPA1L3O60292 1781 aaPredicted RBP12.18□□□□□ -0.46
SCIMP-201ENST00000399600 C5P01031 1676 aa12.17□□□□□ -0.46
SCIMP-201ENST00000399600 ZNF831Q5JPB2 1677 aa12.17□□□□□ -0.46
SCIMP-201ENST00000399600 MRC1P22897 1456 aa12.17□□□□□ -0.46
SCIMP-201ENST00000399600 TUBGCP6Q96RT7 1819 aa12.17□□□□□ -0.46
SCIMP-201ENST00000399600 ANP32CO43423 234 aa12.17□□□□□ -0.46
SCIMP-201ENST00000399600 HMGB2P26583 209 aaKnown RBP12.17□□□□□ -0.46
SCIMP-201ENST00000399600 CCDC184Q52MB2 194 aa12.17□□□□□ -0.46
SCIMP-201ENST00000399600 ADAMTS8Q9UP79 889 aa12.17□□□□□ -0.46
SCIMP-201ENST00000399600 QSER1Q2KHR3 1735 aa12.17□□□□□ -0.46
SCIMP-201ENST00000399600 CEMIPQ8WUJ3 1361 aa12.17□□□□□ -0.46
SCIMP-201ENST00000399600 CASZ1Q86V15 1759 aa12.16□□□□□ -0.46
SCIMP-201ENST00000399600 HTATSF1O43719 755 aaKnown RBP12.16□□□□□ -0.46
SCIMP-201ENST00000399600 NEFMP07197 916 aa12.16□□□□□ -0.46
SCIMP-201ENST00000399600 ATP6V1AP38606 617 aa12.16□□□□□ -0.46
SCIMP-201ENST00000399600 ITPK1Q13572 414 aa12.16□□□□□ -0.46
SCIMP-201ENST00000399600 RBM42Q9BTD8 480 aaKnown RBP12.16□□□□□ -0.46
SCIMP-201ENST00000399600 SPON1Q9HCB6 807 aa12.16□□□□□ -0.46
SCIMP-201ENST00000399600 MYH14Q7Z406 1995 aaKnown RBP12.16□□□□□ -0.46
SCIMP-201ENST00000399600 PTCD1O75127 700 aaKnown RBP12.15□□□□□ -0.46
SCIMP-201ENST00000399600 SLC39A6Q13433 755 aa12.15□□□□□ -0.46
SCIMP-201ENST00000399600 NFE2L2Q16236 605 aa12.15□□□□□ -0.46
SCIMP-201ENST00000399600 MCM10Q7L590 875 aa12.15□□□□□ -0.46
SCIMP-201ENST00000399600 C4BP0C0L5 1744 aa12.14□□□□□ -0.47
SCIMP-201ENST00000399600 TEFQ10587 303 aa12.14□□□□□ -0.47
SCIMP-201ENST00000399600 DCTN1Q14203 1278 aa12.14□□□□□ -0.47
SCIMP-201ENST00000399600 WDR43Q15061 677 aaKnown RBP eCLIP12.14□□□□□ -0.47
SCIMP-201ENST00000399600 LINC00116Q8NCU8 138 aa12.14□□□□□ -0.47
SCIMP-201ENST00000399600 RTF1Q92541 710 aaKnown RBP12.14□□□□□ -0.47
SCIMP-201ENST00000399600 TFCP2L1Q9NZI6 479 aa12.14□□□□□ -0.47
SCIMP-201ENST00000399600 UBR3Q6ZT12 1888 aa12.14□□□□□ -0.47
SCIMP-201ENST00000399600 TMPOP42166 694 aaKnown RBP12.13□□□□□ -0.47
SCIMP-201ENST00000399600 RUNDC1Q96C34 613 aa12.13□□□□□ -0.47
SCIMP-201ENST00000399600 COL5A3P25940 1745 aaPredicted RBP12.13□□□□□ -0.47
SCIMP-201ENST00000399600 UBR2Q8IWV8 1755 aa12.13□□□□□ -0.47
SCIMP-201ENST00000399600 PNPLA7Q6ZV29 1317 aa12.12□□□□□ -0.47
SCIMP-201ENST00000399600 MAPK8IP3Q9UPT6 1336 aa12.12□□□□□ -0.47
SCIMP-201ENST00000399600 ZNF790Q6PG37 636 aa12.12□□□□□ -0.47
SCIMP-201ENST00000399600 COL23A1Q86Y22 540 aaPredicted RBP12.12□□□□□ -0.47
SCIMP-201ENST00000399600 CCDC146Q8IYE0 955 aa12.12□□□□□ -0.47
SCIMP-201ENST00000399600 RIPK4P57078 832 aa12.11□□□□□ -0.47
SCIMP-201ENST00000399600 RC3H1Q5TC82 1133 aaKnown RBP12.11□□□□□ -0.47
SCIMP-201ENST00000399600 AMIGO3Q86WK7 504 aa12.11□□□□□ -0.47
SCIMP-201ENST00000399600 PNISRQ8TF01 805 aaKnown RBP12.11□□□□□ -0.47
SCIMP-201ENST00000399600 SLC16A10Q8TF71 515 aa12.11□□□□□ -0.47
SCIMP-201ENST00000399600 TJP1Q07157 1748 aa12.11□□□□□ -0.47
SCIMP-201ENST00000399600 CICQ96RK0 1608 aaPredicted RBP12.11□□□□□ -0.47
SCIMP-201ENST00000399600 KCPQ6ZWJ8 1503 aa12.11□□□□□ -0.47
SCIMP-201ENST00000399600 BTBD11A6QL63 1104 aa12.1□□□□□ -0.47
SCIMP-201ENST00000399600 KCNQ3O43525 872 aa12.1□□□□□ -0.47
SCIMP-201ENST00000399600 ZBTB7AO95365 584 aa12.1□□□□□ -0.47
SCIMP-201ENST00000399600 YY1P25490 414 aa12.1□□□□□ -0.47
SCIMP-201ENST00000399600 TAF7Q15545 349 aaPredicted RBP12.1□□□□□ -0.47
SCIMP-201ENST00000399600 SMIM5Q71RC9 77 aa12.1□□□□□ -0.47
SCIMP-201ENST00000399600 ZNF496Q96IT1 587 aaPredicted RBP12.1□□□□□ -0.47
SCIMP-201ENST00000399600 AK7Q96M32 723 aa12.1□□□□□ -0.47
SCIMP-201ENST00000399600 THUMPD2Q9BTF0 503 aaKnown RBP12.1□□□□□ -0.47
SCIMP-201ENST00000399600 ATF5Q9Y2D1 282 aaPredicted RBP12.1□□□□□ -0.47
SCIMP-201ENST00000399600 COL24A1Q17RW2 1714 aa12.09□□□□□ -0.47
SCIMP-201ENST00000399600 DNAJC10Q8IXB1 793 aa12.09□□□□□ -0.47
SCIMP-201ENST00000399600 TTC5Q8N0Z6 440 aa12.09□□□□□ -0.47
SCIMP-201ENST00000399600 VSIG10Q8N0Z9 540 aa12.09□□□□□ -0.47
SCIMP-201ENST00000399600 FLAD1Q8NFF5 587 aa12.09□□□□□ -0.47
SCIMP-201ENST00000399600 MTFR1LQ9H019 292 aa12.09□□□□□ -0.47
SCIMP-201ENST00000399600 MRS2Q9HD23 443 aa12.09□□□□□ -0.47
SCIMP-201ENST00000399600 RRP7AQ9Y3A4 280 aaKnown RBP12.09□□□□□ -0.47
SCIMP-201ENST00000399600 CNTNAP4Q9C0A0 1308 aa12.09□□□□□ -0.47
SCIMP-201ENST00000399600 GNPATO15228 680 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms