RNA–Protein interactions for RNA: ENST00000399295.2

SMIM11A-202, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM11A, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-202ENST00000399295 LOC102724428A0A0B4J2F2 783 aa23.17■■□□□ 1.3
SMIM11A-202ENST00000399295 SIK1P57059 783 aa23.17■■□□□ 1.3
SMIM11A-202ENST00000399295 ZNF827Q17R98 1081 aa23.17■■□□□ 1.3
SMIM11A-202ENST00000399295 LRP5O75197 1615 aa23.16■■□□□ 1.3
SMIM11A-202ENST00000399295 IL17REQ8NFR9 667 aa23.16■■□□□ 1.3
SMIM11A-202ENST00000399295 AKT1S1Q96B36 256 aa23.16■■□□□ 1.3
SMIM11A-202ENST00000399295 PLEKHF1Q96S99 279 aa23.16■■□□□ 1.3
SMIM11A-202ENST00000399295 PAPPAQ13219 1627 aa23.15■■□□□ 1.3
SMIM11A-202ENST00000399295 SCN11AQ9UI33 1791 aa23.14■■□□□ 1.3
SMIM11A-202ENST00000399295 WDR43Q15061 677 aaKnown RBP eCLIP23.14■■□□□ 1.29
SMIM11A-202ENST00000399295 RBM42Q9BTD8 480 aaKnown RBP23.14■■□□□ 1.29
SMIM11A-202ENST00000399295 MAPK8IP3Q9UPT6 1336 aa23.13■■□□□ 1.29
SMIM11A-202ENST00000399295 ATP6V1AP38606 617 aa23.13■■□□□ 1.29
SMIM11A-202ENST00000399295 TEFQ10587 303 aa23.13■■□□□ 1.29
SMIM11A-202ENST00000399295 RTF1Q92541 710 aaKnown RBP23.13■■□□□ 1.29
SMIM11A-202ENST00000399295 TFCP2L1Q9NZI6 479 aa23.13■■□□□ 1.29
SMIM11A-202ENST00000399295 SRCAPQ6ZRS2 3230 aa23.12■■□□□ 1.29
SMIM11A-202ENST00000399295 MRC1P22897 1456 aa23.11■■□□□ 1.29
SMIM11A-202ENST00000399295 PTCD1O75127 700 aaKnown RBP23.11■■□□□ 1.29
SMIM11A-202ENST00000399295 PDGFDQ9GZP0 370 aaPredicted RBP23.11■■□□□ 1.29
SMIM11A-202ENST00000399295 SPON1Q9HCB6 807 aa23.11■■□□□ 1.29
SMIM11A-202ENST00000399295 ADAMTS7Q9UKP4 1686 aa23.1■■□□□ 1.29
SMIM11A-202ENST00000399295 HTATSF1O43719 755 aaKnown RBP23.1■■□□□ 1.29
SMIM11A-202ENST00000399295 ITPK1Q13572 414 aa23.1■■□□□ 1.29
SMIM11A-202ENST00000399295 NFE2L2Q16236 605 aa23.09■■□□□ 1.29
SMIM11A-202ENST00000399295 MCM10Q7L590 875 aa23.09■■□□□ 1.29
SMIM11A-202ENST00000399295 SLC4A9Q96Q91 983 aa23.09■■□□□ 1.29
SMIM11A-202ENST00000399295 ADAMTS8Q9UP79 889 aa23.09■■□□□ 1.29
SMIM11A-202ENST00000399295 CEMIPQ8WUJ3 1361 aa23.09■■□□□ 1.29
SMIM11A-202ENST00000399295 SLC39A6Q13433 755 aa23.08■■□□□ 1.29
SMIM11A-202ENST00000399295 LINC00116Q8NCU8 138 aa23.08■■□□□ 1.29
SMIM11A-202ENST00000399295 SLC16A10Q8TF71 515 aa23.08■■□□□ 1.29
SMIM11A-202ENST00000399295 DCTN1Q14203 1278 aa23.07■■□□□ 1.28
SMIM11A-202ENST00000399295 AK7Q96M32 723 aa23.07■■□□□ 1.28
SMIM11A-202ENST00000399295 PNPLA7Q6ZV29 1317 aa23.07■■□□□ 1.28
SMIM11A-202ENST00000399295 QSER1Q2KHR3 1735 aa23.06■■□□□ 1.28
SMIM11A-202ENST00000399295 CCDC146Q8IYE0 955 aa23.06■■□□□ 1.28
SMIM11A-202ENST00000399295 FLAD1Q8NFF5 587 aa23.06■■□□□ 1.28
SMIM11A-202ENST00000399295 ZBTB7AO95365 584 aa23.05■■□□□ 1.28
SMIM11A-202ENST00000399295 CCDC184Q52MB2 194 aa23.05■■□□□ 1.28
SMIM11A-202ENST00000399295 C5P01031 1676 aa23.05■■□□□ 1.28
SMIM11A-202ENST00000399295 TTC5Q8N0Z6 440 aa23.04■■□□□ 1.28
SMIM11A-202ENST00000399295 RUNDC1Q96C34 613 aa23.04■■□□□ 1.28
SMIM11A-202ENST00000399295 CASZ1Q86V15 1759 aa23.04■■□□□ 1.28
SMIM11A-202ENST00000399295 BTBD11A6QL63 1104 aa23.03■■□□□ 1.28
SMIM11A-202ENST00000399295 MTFR1LQ9H019 292 aa23.03■■□□□ 1.28
SMIM11A-202ENST00000399295 RIPK4P57078 832 aa23.02■■□□□ 1.28
SMIM11A-202ENST00000399295 ZNF790Q6PG37 636 aa23.02■■□□□ 1.28
SMIM11A-202ENST00000399295 VIRMAQ69YN4 1812 aaKnown RBP23.02■■□□□ 1.28
SMIM11A-202ENST00000399295 C4BP0C0L5 1744 aa23.02■■□□□ 1.28
SMIM11A-202ENST00000399295 TAF1LQ8IZX4 1826 aa23.01■■□□□ 1.27
SMIM11A-202ENST00000399295 ZNF831Q5JPB2 1677 aa23.01■■□□□ 1.27
SMIM11A-202ENST00000399295 MSH5O43196 834 aa23.01■■□□□ 1.27
SMIM11A-202ENST00000399295 TMPOP42166 694 aaKnown RBP23.01■■□□□ 1.27
SMIM11A-202ENST00000399295 COL23A1Q86Y22 540 aaPredicted RBP23.01■■□□□ 1.27
SMIM11A-202ENST00000399295 MRS2Q9HD23 443 aa23.01■■□□□ 1.27
SMIM11A-202ENST00000399295 ATF5Q9Y2D1 282 aaPredicted RBP23.01■■□□□ 1.27
SMIM11A-202ENST00000399295 GNPATO15228 680 aa23■■□□□ 1.27
SMIM11A-202ENST00000399295 RC3H1Q5TC82 1133 aaKnown RBP23■■□□□ 1.27
SMIM11A-202ENST00000399295 TAF7Q15545 349 aaPredicted RBP22.99■■□□□ 1.27
SMIM11A-202ENST00000399295 RRP7AQ9Y3A4 280 aaKnown RBP22.99■■□□□ 1.27
SMIM11A-202ENST00000399295 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.98■■□□□ 1.27
SMIM11A-202ENST00000399295 PHF14O94880 888 aa22.98■■□□□ 1.27
SMIM11A-202ENST00000399295 SSFA2P28290 1259 aa22.98■■□□□ 1.27
SMIM11A-202ENST00000399295 AMIGO3Q86WK7 504 aa22.98■■□□□ 1.27
SMIM11A-202ENST00000399295 DNAJC10Q8IXB1 793 aa22.98■■□□□ 1.27
SMIM11A-202ENST00000399295 VSIG10Q8N0Z9 540 aa22.98■■□□□ 1.27
SMIM11A-202ENST00000399295 ZNF496Q96IT1 587 aaPredicted RBP22.98■■□□□ 1.27
SMIM11A-202ENST00000399295 THUMPD2Q9BTF0 503 aaKnown RBP22.98■■□□□ 1.27
SMIM11A-202ENST00000399295 CNTNAP4Q9C0A0 1308 aa22.98■■□□□ 1.27
SMIM11A-202ENST00000399295 KCPQ6ZWJ8 1503 aa22.98■■□□□ 1.27
SMIM11A-202ENST00000399295 KCNQ3O43525 872 aa22.97■■□□□ 1.27
SMIM11A-202ENST00000399295 LMOD3Q0VAK6 560 aa22.97■■□□□ 1.27
SMIM11A-202ENST00000399295 NEUROD2Q15784 382 aa22.97■■□□□ 1.27
SMIM11A-202ENST00000399295 SMIM5Q71RC9 77 aa22.97■■□□□ 1.27
SMIM11A-202ENST00000399295 PNISRQ8TF01 805 aaKnown RBP22.97■■□□□ 1.27
SMIM11A-202ENST00000399295 RTCBQ9Y3I0 505 aaKnown RBP22.97■■□□□ 1.27
SMIM11A-202ENST00000399295 CRKLP46109 303 aaKnown RBP22.96■■□□□ 1.27
SMIM11A-202ENST00000399295 FMNL2Q96PY5 1086 aa22.96■■□□□ 1.27
SMIM11A-202ENST00000399295 PPP1R1BQ9UD71 204 aaPredicted RBP22.96■■□□□ 1.27
SMIM11A-202ENST00000399295 SIPA1L3O60292 1781 aaPredicted RBP22.96■■□□□ 1.27
SMIM11A-202ENST00000399295 PTGER2P43116 358 aa22.95■■□□□ 1.26
SMIM11A-202ENST00000399295 TUBGCP6Q96RT7 1819 aa22.95■■□□□ 1.26
SMIM11A-202ENST00000399295 HEG1Q9ULI3 1381 aa22.94■■□□□ 1.26
SMIM11A-202ENST00000399295 RPS6KA4O75676 772 aa22.94■■□□□ 1.26
SMIM11A-202ENST00000399295 CYP19A1P11511 503 aaPredicted RBP22.94■■□□□ 1.26
SMIM11A-202ENST00000399295 MIS18AQ9NYP9 233 aa22.94■■□□□ 1.26
SMIM11A-202ENST00000399295 DLG5Q8TDM6 1919 aa22.94■■□□□ 1.26
SMIM11A-202ENST00000399295 TRAPPC3LQ5T215 181 aa22.93■■□□□ 1.26
SMIM11A-202ENST00000399295 COL5A3P25940 1745 aaPredicted RBP22.92■■□□□ 1.26
SMIM11A-202ENST00000399295 APAF1O14727 1248 aa22.92■■□□□ 1.26
SMIM11A-202ENST00000399295 STARD3NLO95772 234 aa22.92■■□□□ 1.26
SMIM11A-202ENST00000399295 INTS5Q6P9B9 1019 aaKnown RBP22.92■■□□□ 1.26
SMIM11A-202ENST00000399295 TEX13AQ9BXU3 409 aaPredicted RBP22.92■■□□□ 1.26
SMIM11A-202ENST00000399295 CCDC87Q9NVE4 849 aa22.92■■□□□ 1.26
SMIM11A-202ENST00000399295 UBR2Q8IWV8 1755 aa22.91■■□□□ 1.26
SMIM11A-202ENST00000399295 TJP1Q07157 1748 aa22.91■■□□□ 1.26
SMIM11A-202ENST00000399295 SGIP1Q9BQI5 828 aa22.91■■□□□ 1.26
SMIM11A-202ENST00000399295 CICQ96RK0 1608 aaPredicted RBP22.9■■□□□ 1.26
SMIM11A-202ENST00000399295 UBR3Q6ZT12 1888 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms