RNA–Protein interactions for RNA: ENST00000399273.5

CCDC144A-206, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC144A, Length 8,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-206ENST00000399273 CUL7Q14999 1698 aa13.54□□□□□ -0.24
CCDC144A-206ENST00000399273 AFAP1Q8N556 730 aa13.54□□□□□ -0.24
CCDC144A-206ENST00000399273 SPATA32Q96LK8 384 aa13.54□□□□□ -0.24
CCDC144A-206ENST00000399273 SLC5A1P13866 664 aa13.54□□□□□ -0.24
CCDC144A-206ENST00000399273 COMMD10Q9Y6G5 202 aa13.54□□□□□ -0.24
CCDC144A-206ENST00000399273 FERMT1Q9BQL6 677 aa13.54□□□□□ -0.24
CCDC144A-206ENST00000399273 PHAXQ9H814 394 aaKnown RBP13.54□□□□□ -0.24
CCDC144A-206ENST00000399273 ZNF644Q9H582 1327 aaPredicted RBP13.54□□□□□ -0.24
CCDC144A-206ENST00000399273 CFAP70Q5T0N1 1121 aa13.54□□□□□ -0.24
CCDC144A-206ENST00000399273 NAPBQ9H115 298 aa13.54□□□□□ -0.24
CCDC144A-206ENST00000399273 MINDY4BA8MYZ0 360 aa13.54□□□□□ -0.24
CCDC144A-206ENST00000399273 CCDC148Q8NFR7 591 aa13.54□□□□□ -0.24
CCDC144A-206ENST00000399273 EXOSC9Q06265 439 aaKnown RBP13.53□□□□□ -0.24
CCDC144A-206ENST00000399273 CWC27Q6UX04 472 aaKnown RBP13.53□□□□□ -0.24
CCDC144A-206ENST00000399273 IQCA1Q86XH1 822 aa13.53□□□□□ -0.24
CCDC144A-206ENST00000399273 NGLY1Q96IV0 654 aa13.53□□□□□ -0.24
CCDC144A-206ENST00000399273 PDRG1Q9NUG6 133 aa13.53□□□□□ -0.24
CCDC144A-206ENST00000399273 ADAMTS8Q9UP79 889 aa13.53□□□□□ -0.24
CCDC144A-206ENST00000399273 FKBP15Q5T1M5 1219 aa13.53□□□□□ -0.24
CCDC144A-206ENST00000399273 CA8P35219 290 aa13.53□□□□□ -0.24
CCDC144A-206ENST00000399273 MAP3K12Q12852 859 aa13.53□□□□□ -0.24
CCDC144A-206ENST00000399273 IFT140Q96RY7 1462 aa13.53□□□□□ -0.24
CCDC144A-206ENST00000399273 CETN1Q12798 172 aa13.53□□□□□ -0.24
CCDC144A-206ENST00000399273 HOOK3Q86VS8 718 aa13.52□□□□□ -0.24
CCDC144A-206ENST00000399273 ZSCAN31Q96LW9 406 aaPredicted RBP13.52□□□□□ -0.24
CCDC144A-206ENST00000399273 TTC21AQ8NDW8 1320 aa13.52□□□□□ -0.24
CCDC144A-206ENST00000399273 IFIT5Q13325 482 aaKnown RBP13.52□□□□□ -0.24
CCDC144A-206ENST00000399273 A0A087WZG4 1122 aa13.52□□□□□ -0.25
CCDC144A-206ENST00000399273 NF2P35240 595 aa13.52□□□□□ -0.25
CCDC144A-206ENST00000399273 XPCQ01831 940 aaPredicted RBP13.52□□□□□ -0.25
CCDC144A-206ENST00000399273 SPA17Q15506 151 aa13.52□□□□□ -0.25
CCDC144A-206ENST00000399273 FAM177A1Q8N128 213 aaPredicted RBP13.52□□□□□ -0.25
CCDC144A-206ENST00000399273 CTCFLQ8NI51 663 aaPredicted RBP13.52□□□□□ -0.25
CCDC144A-206ENST00000399273 DMRT2Q9Y5R5 561 aa13.52□□□□□ -0.25
CCDC144A-206ENST00000399273 UBA5Q9GZZ9 404 aa13.52□□□□□ -0.25
CCDC144A-206ENST00000399273 TRAK2O60296 914 aa13.52□□□□□ -0.25
CCDC144A-206ENST00000399273 BAG4O95429 457 aaKnown RBP13.51□□□□□ -0.25
CCDC144A-206ENST00000399273 ST5P78524 1137 aa13.51□□□□□ -0.25
CCDC144A-206ENST00000399273 ADAMTS2O95450 1211 aa13.51□□□□□ -0.25
CCDC144A-206ENST00000399273 PDE3AQ14432 1141 aa13.51□□□□□ -0.25
CCDC144A-206ENST00000399273 JAKMIP1Q96N16 626 aaKnown RBP13.51□□□□□ -0.25
CCDC144A-206ENST00000399273 PPP2R1AP30153 589 aa13.51□□□□□ -0.25
CCDC144A-206ENST00000399273 ZC3H6P61129 1189 aaKnown RBP13.51□□□□□ -0.25
CCDC144A-206ENST00000399273 AMOTQ4VCS5 1084 aa13.51□□□□□ -0.25
CCDC144A-206ENST00000399273 LARP1Q6PKG0 1096 aaKnown RBP13.51□□□□□ -0.25
CCDC144A-206ENST00000399273 CCDC85AQ96PX6 553 aaPredicted RBP13.51□□□□□ -0.25
CCDC144A-206ENST00000399273 CCDC141Q6ZP82 1450 aa13.51□□□□□ -0.25
CCDC144A-206ENST00000399273 KIF20AO95235 890 aa13.51□□□□□ -0.25
CCDC144A-206ENST00000399273 WDR63Q8IWG1 891 aa13.51□□□□□ -0.25
CCDC144A-206ENST00000399273 DYDC1Q8WWB3 177 aa13.51□□□□□ -0.25
CCDC144A-206ENST00000399273 RPGRIP1LQ68CZ1 1315 aa13.51□□□□□ -0.25
CCDC144A-206ENST00000399273 CACNA2D4Q7Z3S7 1137 aa13.51□□□□□ -0.25
CCDC144A-206ENST00000399273 SSX2IPQ9Y2D8 614 aa13.51□□□□□ -0.25
CCDC144A-206ENST00000399273 PPP6R1Q9UPN7 881 aa13.51□□□□□ -0.25
CCDC144A-206ENST00000399273 RAB11FIP3O75154 756 aa13.5□□□□□ -0.25
CCDC144A-206ENST00000399273 CTNNA2P26232 953 aa13.5□□□□□ -0.25
CCDC144A-206ENST00000399273 PPM1EQ8WY54 764 aa13.5□□□□□ -0.25
CCDC144A-206ENST00000399273 FAM193AP78312 1265 aa13.5□□□□□ -0.25
CCDC144A-206ENST00000399273 UPF3BQ9BZI7 483 aaKnown RBP13.5□□□□□ -0.25
CCDC144A-206ENST00000399273 CCDC12Q8WUD4 166 aaPredicted RBP13.5□□□□□ -0.25
CCDC144A-206ENST00000399273 CASTP20810 708 aaKnown RBP13.5□□□□□ -0.25
CCDC144A-206ENST00000399273 STXBP4Q6ZWJ1 553 aa13.5□□□□□ -0.25
CCDC144A-206ENST00000399273 LRRC45Q96CN5 670 aa13.5□□□□□ -0.25
CCDC144A-206ENST00000399273 RNF41Q9H4P4 317 aaPredicted RBP13.5□□□□□ -0.25
CCDC144A-206ENST00000399273 PTCD1O75127 700 aaKnown RBP13.5□□□□□ -0.25
CCDC144A-206ENST00000399273 RRS1Q15050 365 aaKnown RBP13.5□□□□□ -0.25
CCDC144A-206ENST00000399273 MPRIPQ6WCQ1 1025 aa13.49□□□□□ -0.25
CCDC144A-206ENST00000399273 HLA-DOAP06340 250 aa13.49□□□□□ -0.25
CCDC144A-206ENST00000399273 CATIPQ7Z7H3 387 aa13.49□□□□□ -0.25
CCDC144A-206ENST00000399273 ARHGAP29Q52LW3 1261 aa13.49□□□□□ -0.25
CCDC144A-206ENST00000399273 ANKRD30BQ9BXX2 1392 aa13.49□□□□□ -0.25
CCDC144A-206ENST00000399273 POLA1P09884 1462 aaPredicted RBP13.49□□□□□ -0.25
CCDC144A-206ENST00000399273 GOLGA6L10A0A0M3HER8 536 aa13.48□□□□□ -0.25
CCDC144A-206ENST00000399273 GSTTP1A0A1W2PQM5 241 aa13.48□□□□□ -0.25
CCDC144A-206ENST00000399273 MAP2K1Q02750 393 aaPredicted RBP13.48□□□□□ -0.25
CCDC144A-206ENST00000399273 TSR2Q969E8 191 aaKnown RBP13.48□□□□□ -0.25
CCDC144A-206ENST00000399273 RUSC2Q8N2Y8 1516 aa13.48□□□□□ -0.25
CCDC144A-206ENST00000399273 BAG3O95817 575 aa13.48□□□□□ -0.25
CCDC144A-206ENST00000399273 ITSN2Q9NZM3 1697 aa13.48□□□□□ -0.25
CCDC144A-206ENST00000399273 K7ELQ4 463 aaPredicted RBP13.48□□□□□ -0.25
CCDC144A-206ENST00000399273 BCAR3O75815 825 aa13.48□□□□□ -0.25
CCDC144A-206ENST00000399273 NUP62CLQ9H1M0 184 aa13.48□□□□□ -0.25
CCDC144A-206ENST00000399273 TAOK3Q9H2K8 898 aa13.48□□□□□ -0.25
CCDC144A-206ENST00000399273 KIF1BPQ96EK5 621 aa13.47□□□□□ -0.25
CCDC144A-206ENST00000399273 CFTRP13569 1480 aa13.47□□□□□ -0.25
CCDC144A-206ENST00000399273 MCM3P25205 808 aa13.47□□□□□ -0.25
CCDC144A-206ENST00000399273 MAP3K9P80192 1104 aa13.47□□□□□ -0.25
CCDC144A-206ENST00000399273 KIAA1107Q9UPP5 1409 aa13.47□□□□□ -0.25
CCDC144A-206ENST00000399273 RANBP6O60518 1105 aaKnown RBP13.47□□□□□ -0.25
CCDC144A-206ENST00000399273 HMGB1P09429 215 aaKnown RBP13.47□□□□□ -0.25
CCDC144A-206ENST00000399273 MRPS9P82933 396 aaKnown RBP13.47□□□□□ -0.25
CCDC144A-206ENST00000399273 CHD1LQ86WJ1 897 aa13.47□□□□□ -0.25
CCDC144A-206ENST00000399273 CTNNBL1Q8WYA6 563 aaPredicted RBP13.47□□□□□ -0.25
CCDC144A-206ENST00000399273 CDC5LQ99459 802 aaKnown RBP13.47□□□□□ -0.25
CCDC144A-206ENST00000399273 C6orf229H3BNL8 230 aa13.47□□□□□ -0.25
CCDC144A-206ENST00000399273 GCOM1H8Y6P7 765 aaPredicted RBP13.47□□□□□ -0.25
CCDC144A-206ENST00000399273 MYZAPP0CAP1 466 aa13.47□□□□□ -0.25
CCDC144A-206ENST00000399273 MAP9Q49MG5 647 aa13.47□□□□□ -0.25
CCDC144A-206ENST00000399273 SPTY2D1Q68D10 685 aaPredicted RBP13.47□□□□□ -0.25
CCDC144A-206ENST00000399273 PDZRN3Q9UPQ7 1066 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms