RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 IL1RAPL2Q9NP60 686 aa23.95■■□□□ 1.42
COL13A1-205ENST00000398978 NRKQ7Z2Y5 1582 aa23.94■■□□□ 1.42
COL13A1-205ENST00000398978 NLRP6P59044 892 aa23.94■■□□□ 1.42
COL13A1-205ENST00000398978 NUCB2P80303 420 aa23.94■■□□□ 1.42
COL13A1-205ENST00000398978 C14orf37Q86TY3 774 aa23.94■■□□□ 1.42
COL13A1-205ENST00000398978 UNC5CLQ8IV45 518 aa23.94■■□□□ 1.42
COL13A1-205ENST00000398978 LRRFIP2Q9Y608 721 aaKnown RBP23.94■■□□□ 1.42
COL13A1-205ENST00000398978 CCT4P50991 539 aaKnown RBP23.93■■□□□ 1.42
COL13A1-205ENST00000398978 TPRNQ4KMQ1 711 aa23.93■■□□□ 1.42
COL13A1-205ENST00000398978 NSFL1CQ9UNZ2 370 aaKnown RBP23.93■■□□□ 1.42
COL13A1-205ENST00000398978 CYP2E1P05181 493 aaPredicted RBP23.93■■□□□ 1.42
COL13A1-205ENST00000398978 ANO2Q9NQ90 1003 aa23.93■■□□□ 1.42
COL13A1-205ENST00000398978 CEP170BQ9Y4F5 1589 aaPredicted RBP23.93■■□□□ 1.42
COL13A1-205ENST00000398978 PTPRUQ92729 1446 aa23.92■■□□□ 1.42
COL13A1-205ENST00000398978 ZSCAN23Q3MJ62 389 aa23.92■■□□□ 1.42
COL13A1-205ENST00000398978 UPF3BQ9BZI7 483 aaKnown RBP23.91■■□□□ 1.42
COL13A1-205ENST00000398978 GPT2Q8TD30 523 aa23.91■■□□□ 1.42
COL13A1-205ENST00000398978 LRRCC1Q9C099 1032 aa23.91■■□□□ 1.42
COL13A1-205ENST00000398978 ISY1Q9ULR0 285 aaKnown RBP23.91■■□□□ 1.42
COL13A1-205ENST00000398978 ZBTB7CA1YPR0 619 aa23.9■■□□□ 1.42
COL13A1-205ENST00000398978 NUTM1Q86Y26 1132 aa23.9■■□□□ 1.42
COL13A1-205ENST00000398978 IL25Q9H293 177 aa23.9■■□□□ 1.42
COL13A1-205ENST00000398978 DTNBO60941 627 aa23.9■■□□□ 1.42
COL13A1-205ENST00000398978 MX1P20591 662 aa23.9■■□□□ 1.42
COL13A1-205ENST00000398978 PTMSP20962 102 aa23.9■■□□□ 1.42
COL13A1-205ENST00000398978 CLEC17AQ6ZS10 378 aa23.9■■□□□ 1.42
COL13A1-205ENST00000398978 TMX3Q96JJ7 454 aa23.9■■□□□ 1.42
COL13A1-205ENST00000398978 PHAXQ9H814 394 aaKnown RBP23.9■■□□□ 1.42
COL13A1-205ENST00000398978 RBM33Q96EV2 1170 aaKnown RBP23.89■■□□□ 1.42
COL13A1-205ENST00000398978 REREQ9P2R6 1566 aa23.89■■□□□ 1.41
COL13A1-205ENST00000398978 USP31Q70CQ4 1352 aa23.88■■□□□ 1.41
COL13A1-205ENST00000398978 EIF2S2P20042 333 aaKnown RBP23.88■■□□□ 1.41
COL13A1-205ENST00000398978 PRIM1P49642 420 aaKnown RBP23.88■■□□□ 1.41
COL13A1-205ENST00000398978 IL17REQ8NFR9 667 aa23.88■■□□□ 1.41
COL13A1-205ENST00000398978 ESYT1Q9BSJ8 1104 aa23.88■■□□□ 1.41
COL13A1-205ENST00000398978 FLT4P35916 1363 aa23.88■■□□□ 1.41
COL13A1-205ENST00000398978 RBSNQ9H1K0 784 aa23.88■■□□□ 1.41
COL13A1-205ENST00000398978 ARHGEF10O15013 1369 aa23.87■■□□□ 1.41
COL13A1-205ENST00000398978 LARP6Q9BRS8 491 aaKnown RBP23.87■■□□□ 1.41
COL13A1-205ENST00000398978 GNAT3A8MTJ3 354 aa23.86■■□□□ 1.41
COL13A1-205ENST00000398978 ANXA1P04083 346 aa23.85■■□□□ 1.41
COL13A1-205ENST00000398978 CCDC30Q5VVM6 783 aa23.85■■□□□ 1.41
COL13A1-205ENST00000398978 OSBPL3Q9H4L5 887 aa23.85■■□□□ 1.41
COL13A1-205ENST00000398978 SBNO1A3KN83 1393 aa23.85■■□□□ 1.41
COL13A1-205ENST00000398978 IGSF1Q8N6C5 1336 aa23.85■■□□□ 1.41
COL13A1-205ENST00000398978 CHMLP26374 656 aa23.85■■□□□ 1.41
COL13A1-205ENST00000398978 CWC22Q9HCG8 908 aaKnown RBP23.85■■□□□ 1.41
COL13A1-205ENST00000398978 ATP8B2P98198 1209 aa23.84■■□□□ 1.41
COL13A1-205ENST00000398978 GDPD2Q9HCC8 539 aa23.84■■□□□ 1.41
COL13A1-205ENST00000398978 RGPD1P0DJD0 1748 aa23.84■■□□□ 1.41
COL13A1-205ENST00000398978 USP44Q9H0E7 712 aa23.84■■□□□ 1.41
COL13A1-205ENST00000398978 SYCE3A1L190 88 aa23.83■■□□□ 1.41
COL13A1-205ENST00000398978 TMEM63CQ9P1W3 806 aa23.83■■□□□ 1.41
COL13A1-205ENST00000398978 SALL3Q9BXA9 1300 aa23.83■■□□□ 1.41
COL13A1-205ENST00000398978 RGPD8O14715 1765 aaPredicted RBP23.83■■□□□ 1.41
COL13A1-205ENST00000398978 SETD1BQ9UPS6 1966 aaKnown RBP23.83■■□□□ 1.41
COL13A1-205ENST00000398978 ANP32BQ92688 251 aaKnown RBP23.82■■□□□ 1.4
COL13A1-205ENST00000398978 SSH2Q76I76 1423 aa23.82■■□□□ 1.4
COL13A1-205ENST00000398978 GNAI3P08754 354 aa23.82■■□□□ 1.4
COL13A1-205ENST00000398978 CCDC173Q0VFZ6 552 aa23.82■■□□□ 1.4
COL13A1-205ENST00000398978 RNF214Q8ND24 703 aa23.82■■□□□ 1.4
COL13A1-205ENST00000398978 EID1Q9Y6B2 187 aa23.82■■□□□ 1.4
COL13A1-205ENST00000398978 UBR1Q8IWV7 1749 aa23.82■■□□□ 1.4
COL13A1-205ENST00000398978 HOXC9P31274 260 aa23.82■■□□□ 1.4
COL13A1-205ENST00000398978 ABTB2Q8N961 1025 aa23.82■■□□□ 1.4
COL13A1-205ENST00000398978 HDGFL1Q5TGJ6 251 aa23.81■■□□□ 1.4
COL13A1-205ENST00000398978 UBTFL1P0CB47 393 aaPredicted RBP23.8■■□□□ 1.4
COL13A1-205ENST00000398978 SURF6O75683 361 aaKnown RBP23.8■■□□□ 1.4
COL13A1-205ENST00000398978 KDRP35968 1356 aa23.8■■□□□ 1.4
COL13A1-205ENST00000398978 ZNF445P59923 1031 aa23.8■■□□□ 1.4
COL13A1-205ENST00000398978 TTC21AQ8NDW8 1320 aa23.79■■□□□ 1.4
COL13A1-205ENST00000398978 IBTKQ9P2D0 1353 aaPredicted RBP23.79■■□□□ 1.4
COL13A1-205ENST00000398978 PLEKHG1Q9ULL1 1385 aa23.79■■□□□ 1.4
COL13A1-205ENST00000398978 KCNQ3O43525 872 aa23.79■■□□□ 1.4
COL13A1-205ENST00000398978 PPP1R42Q7Z4L9 355 aa23.79■■□□□ 1.4
COL13A1-205ENST00000398978 TOPAZ1Q8N9V7 1692 aa23.78■■□□□ 1.4
COL13A1-205ENST00000398978 PPP1R9BQ96SB3 815 aa23.78■■□□□ 1.4
COL13A1-205ENST00000398978 LGR6Q9HBX8 967 aa23.78■■□□□ 1.4
COL13A1-205ENST00000398978 NALCNQ8IZF0 1738 aa23.77■■□□□ 1.4
COL13A1-205ENST00000398978 NBPF7P0C2Y1 421 aaPredicted RBP23.77■■□□□ 1.4
COL13A1-205ENST00000398978 TAF7Q15545 349 aaPredicted RBP23.77■■□□□ 1.4
COL13A1-205ENST00000398978 MCCP23508 829 aa23.76■■□□□ 1.39
COL13A1-205ENST00000398978 SRGAP3O43295 1099 aa23.75■■□□□ 1.39
COL13A1-205ENST00000398978 KCNA6P17658 529 aa23.75■■□□□ 1.39
COL13A1-205ENST00000398978 FMN2Q9NZ56 1722 aa23.75■■□□□ 1.39
COL13A1-205ENST00000398978 CPA1P15085 419 aa23.74■■□□□ 1.39
COL13A1-205ENST00000398978 MPNDQ8N594 471 aa23.74■■□□□ 1.39
COL13A1-205ENST00000398978 CHPF2Q9P2E5 772 aa23.73■■□□□ 1.39
COL13A1-205ENST00000398978 MAP3K5Q99683 1374 aa23.73■■□□□ 1.39
COL13A1-205ENST00000398978 GADD45BO75293 160 aaPredicted RBP23.73■■□□□ 1.39
COL13A1-205ENST00000398978 SOS1Q07889 1333 aaPredicted RBP23.73■■□□□ 1.39
COL13A1-205ENST00000398978 ZSCAN30Q86W11 494 aa23.73■■□□□ 1.39
COL13A1-205ENST00000398978 BRD1O95696 1058 aa23.72■■□□□ 1.39
COL13A1-205ENST00000398978 DDX54Q8TDD1 881 aaKnown RBP23.72■■□□□ 1.39
COL13A1-205ENST00000398978 SPG7Q9UQ90 795 aa23.72■■□□□ 1.39
COL13A1-205ENST00000398978 MSNP26038 577 aaKnown RBP23.71■■□□□ 1.39
COL13A1-205ENST00000398978 PI4KAP2A4QPH2 592 aa23.71■■□□□ 1.39
COL13A1-205ENST00000398978 PI4KAP1Q8N8J0 262 aa23.71■■□□□ 1.39
COL13A1-205ENST00000398978 RHPN1Q8TCX5 695 aa23.7■■□□□ 1.39
COL13A1-205ENST00000398978 SRCIN1Q9C0H9 1055 aa23.7■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms