RNA–Protein interactions for RNA: ENST00000398958.6

RCC1-204, Transcript of regulator of chromosome condensation 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RCC1, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-204ENST00000398958 MEIS3Q99687 375 aa14.01□□□□□ -0.17
RCC1-204ENST00000398958 TOPAZ1Q8N9V7 1692 aa14.01□□□□□ -0.17
RCC1-204ENST00000398958 ABCC4O15439 1325 aa14□□□□□ -0.17
RCC1-204ENST00000398958 AIMP1Q12904 312 aaKnown RBP14□□□□□ -0.17
RCC1-204ENST00000398958 FOXD4L1Q9NU39 408 aa14□□□□□ -0.17
RCC1-204ENST00000398958 GNAT3A8MTJ3 354 aa13.99□□□□□ -0.17
RCC1-204ENST00000398958 PHAXQ9H814 394 aaKnown RBP13.99□□□□□ -0.17
RCC1-204ENST00000398958 FMN2Q9NZ56 1722 aa13.99□□□□□ -0.17
RCC1-204ENST00000398958 SBNO1A3KN83 1393 aa13.99□□□□□ -0.17
RCC1-204ENST00000398958 PIP4K2BP78356 416 aa13.99□□□□□ -0.17
RCC1-204ENST00000398958 EP400Q96L91 3159 aa13.99□□□□□ -0.17
RCC1-204ENST00000398958 JARID2Q92833 1246 aaPredicted RBP13.99□□□□□ -0.17
RCC1-204ENST00000398958 ISY1Q9ULR0 285 aaKnown RBP13.99□□□□□ -0.17
RCC1-204ENST00000398958 FKBP5Q13451 457 aaPredicted RBP13.98□□□□□ -0.17
RCC1-204ENST00000398958 API5Q9BZZ5 524 aaKnown RBP13.98□□□□□ -0.17
RCC1-204ENST00000398958 MSH6P52701 1360 aa13.98□□□□□ -0.17
RCC1-204ENST00000398958 TSHZ3Q63HK5 1081 aa13.98□□□□□ -0.17
RCC1-204ENST00000398958 ZNF330Q9Y3S2 320 aaPredicted RBP13.98□□□□□ -0.17
RCC1-204ENST00000398958 SSH2Q76I76 1423 aa13.97□□□□□ -0.17
RCC1-204ENST00000398958 NRKQ7Z2Y5 1582 aa13.97□□□□□ -0.17
RCC1-204ENST00000398958 DDX54Q8TDD1 881 aaKnown RBP13.97□□□□□ -0.17
RCC1-204ENST00000398958 IP6K1Q92551 441 aa13.97□□□□□ -0.17
RCC1-204ENST00000398958 ARHGAP45Q92619 1136 aa13.97□□□□□ -0.17
RCC1-204ENST00000398958 GAS2L3Q86XJ1 694 aa13.97□□□□□ -0.17
RCC1-204ENST00000398958 RBM42Q9BTD8 480 aaKnown RBP13.97□□□□□ -0.17
RCC1-204ENST00000398958 USP31Q70CQ4 1352 aa13.97□□□□□ -0.17
RCC1-204ENST00000398958 TEFQ10587 303 aa13.96□□□□□ -0.17
RCC1-204ENST00000398958 BRPF1P55201 1214 aaPredicted RBP13.96□□□□□ -0.18
RCC1-204ENST00000398958 IGSF1Q8N6C5 1336 aa13.95□□□□□ -0.18
RCC1-204ENST00000398958 TNPO1Q92973 898 aaKnown RBP13.95□□□□□ -0.18
RCC1-204ENST00000398958 PIK3C2AO00443 1686 aa13.95□□□□□ -0.18
RCC1-204ENST00000398958 CRB1P82279 1406 aa13.95□□□□□ -0.18
RCC1-204ENST00000398958 ANKARQ7Z5J8 1434 aa13.94□□□□□ -0.18
RCC1-204ENST00000398958 MYL6BP14649 208 aa13.94□□□□□ -0.18
RCC1-204ENST00000398958 TPM2P07951 284 aa13.94□□□□□ -0.18
RCC1-204ENST00000398958 ARHGEF25Q86VW2 580 aa13.94□□□□□ -0.18
RCC1-204ENST00000398958 GBP4Q96PP9 640 aa13.94□□□□□ -0.18
RCC1-204ENST00000398958 PRDM11Q9NQV5 511 aa13.94□□□□□ -0.18
RCC1-204ENST00000398958 NUTM2BA6NNL0 878 aaPredicted RBP13.93□□□□□ -0.18
RCC1-204ENST00000398958 BTBD11A6QL63 1104 aa13.93□□□□□ -0.18
RCC1-204ENST00000398958 NUTM2EB1AL46 878 aaPredicted RBP13.93□□□□□ -0.18
RCC1-204ENST00000398958 HSP90AB1P08238 724 aaKnown RBP13.93□□□□□ -0.18
RCC1-204ENST00000398958 GSPT1P15170 499 aaKnown RBP13.93□□□□□ -0.18
RCC1-204ENST00000398958 C1orf141Q5JVX7 400 aa13.93□□□□□ -0.18
RCC1-204ENST00000398958 TBC1D9Q6ZT07 1266 aa13.93□□□□□ -0.18
RCC1-204ENST00000398958 BRINP3Q76B58 766 aa13.93□□□□□ -0.18
RCC1-204ENST00000398958 NUTM2AQ8IVF1 878 aaPredicted RBP13.93□□□□□ -0.18
RCC1-204ENST00000398958 GAS2L2Q8NHY3 880 aa13.93□□□□□ -0.18
RCC1-204ENST00000398958 SLAIN2Q9P270 581 aa13.93□□□□□ -0.18
RCC1-204ENST00000398958 NWD1Q149M9 1564 aa13.93□□□□□ -0.18
RCC1-204ENST00000398958 ADAMTS2O95450 1211 aa13.93□□□□□ -0.18
RCC1-204ENST00000398958 HDGFL1Q5TGJ6 251 aa13.93□□□□□ -0.18
RCC1-204ENST00000398958 CEP85Q6P2H3 762 aa13.92□□□□□ -0.18
RCC1-204ENST00000398958 NFATC2IPQ8NCF5 419 aa13.92□□□□□ -0.18
RCC1-204ENST00000398958 GCC1Q96CN9 775 aa13.92□□□□□ -0.18
RCC1-204ENST00000398958 RGS12O14924 1447 aa13.92□□□□□ -0.18
RCC1-204ENST00000398958 DDIT3P35638 169 aa13.92□□□□□ -0.18
RCC1-204ENST00000398958 TOM1L2Q6ZVM7 507 aa13.92□□□□□ -0.18
RCC1-204ENST00000398958 EXOC6BQ9Y2D4 811 aa13.92□□□□□ -0.18
RCC1-204ENST00000398958 C1orf167Q5SNV9 1468 aa13.92□□□□□ -0.18
RCC1-204ENST00000398958 CD2BP2O95400 341 aaKnown RBP13.92□□□□□ -0.18
RCC1-204ENST00000398958 PROSER3Q2NL68 480 aa13.92□□□□□ -0.18
RCC1-204ENST00000398958 INTS3Q68E01 1043 aaKnown RBP13.92□□□□□ -0.18
RCC1-204ENST00000398958 KCNH5Q8NCM2 988 aa13.92□□□□□ -0.18
RCC1-204ENST00000398958 STK31Q9BXU1 1019 aa13.92□□□□□ -0.18
RCC1-204ENST00000398958 CHPF2Q9P2E5 772 aa13.92□□□□□ -0.18
RCC1-204ENST00000398958 SKOR2Q2VWA4 1001 aaPredicted RBP13.91□□□□□ -0.18
RCC1-204ENST00000398958 CADPS2Q86UW7 1296 aa13.91□□□□□ -0.18
RCC1-204ENST00000398958 RAPGEF4Q8WZA2 1011 aa13.91□□□□□ -0.18
RCC1-204ENST00000398958 ARHGEF10O15013 1369 aa13.91□□□□□ -0.18
RCC1-204ENST00000398958 KIAA0232Q92628 1395 aa13.91□□□□□ -0.18
RCC1-204ENST00000398958 NCOA3Q9Y6Q9 1424 aa13.91□□□□□ -0.18
RCC1-204ENST00000398958 KIAA1211Q6ZU35 1233 aa13.91□□□□□ -0.18
RCC1-204ENST00000398958 PLEKHM2Q8IWE5 1019 aa13.91□□□□□ -0.18
RCC1-204ENST00000398958 SNX21Q969T3 373 aa13.91□□□□□ -0.18
RCC1-204ENST00000398958 PTCD1O75127 700 aaKnown RBP13.9□□□□□ -0.18
RCC1-204ENST00000398958 TAF7Q15545 349 aaPredicted RBP13.9□□□□□ -0.18
RCC1-204ENST00000398958 CIZ1Q9ULV3 898 aaPredicted RBP13.9□□□□□ -0.18
RCC1-204ENST00000398958 RAB3GAP1Q15042 981 aa13.9□□□□□ -0.18
RCC1-204ENST00000398958 EVA1CP58658 441 aa13.89□□□□□ -0.19
RCC1-204ENST00000398958 BMP2KLQ5H9B9 411 aa13.89□□□□□ -0.19
RCC1-204ENST00000398958 SYTL4Q96C24 671 aaPredicted RBP13.89□□□□□ -0.19
RCC1-204ENST00000398958 RTL1A6NKG5 1358 aa13.89□□□□□ -0.19
RCC1-204ENST00000398958 RBM25P49756 843 aaKnown RBP13.89□□□□□ -0.19
RCC1-204ENST00000398958 ANKRD44Q8N8A2 993 aa13.89□□□□□ -0.19
RCC1-204ENST00000398958 PDCL3Q9H2J4 239 aa13.89□□□□□ -0.19
RCC1-204ENST00000398958 DCTPP1Q9H773 170 aa13.89□□□□□ -0.19
RCC1-204ENST00000398958 CCDC9Q9Y3X0 531 aaKnown RBP13.89□□□□□ -0.19
RCC1-204ENST00000398958 XIRP1Q702N8 1843 aaKnown RBP13.89□□□□□ -0.19
RCC1-204ENST00000398958 FLIIQ13045 1269 aa13.88□□□□□ -0.19
RCC1-204ENST00000398958 MST1RQ04912 1400 aa13.88□□□□□ -0.19
RCC1-204ENST00000398958 CCDC173Q0VFZ6 552 aa13.88□□□□□ -0.19
RCC1-204ENST00000398958 PTMSP20962 102 aa13.87□□□□□ -0.19
RCC1-204ENST00000398958 RGPD1P0DJD0 1748 aa13.87□□□□□ -0.19
RCC1-204ENST00000398958 ATP10DQ9P241 1426 aa13.87□□□□□ -0.19
RCC1-204ENST00000398958 PNMA6EA0A0J9YXQ4 647 aa13.87□□□□□ -0.19
RCC1-204ENST00000398958 NASPP49321 788 aaPredicted RBP13.87□□□□□ -0.19
RCC1-204ENST00000398958 PLEKHO1Q53GL0 409 aaPredicted RBP13.87□□□□□ -0.19
RCC1-204ENST00000398958 ANP32BQ92688 251 aaKnown RBP13.87□□□□□ -0.19
RCC1-204ENST00000398958 CHMP4BQ9H444 224 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms