RNA–Protein interactions for RNA: ENST00000398631.2

PCDHA12-201, Transcript of protocadherin alpha 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA12, Length 5,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA12-201ENST00000398631 NOS1P29475 1434 aa19.12■□□□□ 0.65
PCDHA12-201ENST00000398631 SERPINC1P01008 464 aa19.11■□□□□ 0.65
PCDHA12-201ENST00000398631 DHX29Q7Z478 1369 aaKnown RBP19.11■□□□□ 0.65
PCDHA12-201ENST00000398631 C11orf95C9JLR9 678 aaPredicted RBP19.11■□□□□ 0.65
PCDHA12-201ENST00000398631 IFIT5Q13325 482 aaKnown RBP19.11■□□□□ 0.65
PCDHA12-201ENST00000398631 DHX8Q14562 1220 aaKnown RBP19.11■□□□□ 0.65
PCDHA12-201ENST00000398631 MAP7D2Q96T17 732 aa19.11■□□□□ 0.65
PCDHA12-201ENST00000398631 ZNF287Q9HBT7 754 aa19.11■□□□□ 0.65
PCDHA12-201ENST00000398631 HYPKQ9NX55 129 aa19.11■□□□□ 0.65
PCDHA12-201ENST00000398631 BMP2KQ9NSY1 1161 aaPredicted RBP19.11■□□□□ 0.65
PCDHA12-201ENST00000398631 SCAF11Q99590 1463 aaKnown RBP19.11■□□□□ 0.65
PCDHA12-201ENST00000398631 KRT28Q7Z3Y7 464 aa19.1■□□□□ 0.65
PCDHA12-201ENST00000398631 SPATA32Q96LK8 384 aa19.1■□□□□ 0.65
PCDHA12-201ENST00000398631 NSD2O96028 1365 aa19.1■□□□□ 0.65
PCDHA12-201ENST00000398631 EXOC5O00471 708 aa19.1■□□□□ 0.65
PCDHA12-201ENST00000398631 TRMT112Q9UI30 125 aaKnown RBP19.09■□□□□ 0.65
PCDHA12-201ENST00000398631 NGLY1Q96IV0 654 aa19.09■□□□□ 0.65
PCDHA12-201ENST00000398631 CASTP20810 708 aaKnown RBP19.08■□□□□ 0.65
PCDHA12-201ENST00000398631 BOLA2Q9H3K6 86 aa19.08■□□□□ 0.65
PCDHA12-201ENST00000398631 F6X3S4 739 aa19.08■□□□□ 0.64
PCDHA12-201ENST00000398631 CADPS2Q86UW7 1296 aa19.08■□□□□ 0.64
PCDHA12-201ENST00000398631 LUC7LQ9NQ29 371 aaKnown RBP19.08■□□□□ 0.64
PCDHA12-201ENST00000398631 MYO6Q9UM54 1294 aa19.08■□□□□ 0.64
PCDHA12-201ENST00000398631 PPFIBP1Q86W92 1011 aa19.07■□□□□ 0.64
PCDHA12-201ENST00000398631 DMRT2Q9Y5R5 561 aa19.07■□□□□ 0.64
PCDHA12-201ENST00000398631 PDCL3Q9H2J4 239 aa19.07■□□□□ 0.64
PCDHA12-201ENST00000398631 NKTRP30414 1462 aaKnown RBP19.07■□□□□ 0.64
PCDHA12-201ENST00000398631 SSBP05455 408 aaKnown RBP eCLIP19.07■□□□□ 0.64
PCDHA12-201ENST00000398631 IFNL2Q8IZJ0 200 aa19.07■□□□□ 0.64
PCDHA12-201ENST00000398631 KRI1Q8N9T8 703 aaKnown RBP19.06■□□□□ 0.64
PCDHA12-201ENST00000398631 A0A087WZG4 1122 aa19.06■□□□□ 0.64
PCDHA12-201ENST00000398631 MAP3K12Q12852 859 aa19.06■□□□□ 0.64
PCDHA12-201ENST00000398631 ERCC4Q92889 916 aaPredicted RBP19.06■□□□□ 0.64
PCDHA12-201ENST00000398631 SMARCA5O60264 1052 aaPredicted RBP19.06■□□□□ 0.64
PCDHA12-201ENST00000398631 USP5P45974 858 aa19.06■□□□□ 0.64
PCDHA12-201ENST00000398631 FLIIQ13045 1269 aa19.06■□□□□ 0.64
PCDHA12-201ENST00000398631 TEX13AQ9BXU3 409 aaPredicted RBP19.06■□□□□ 0.64
PCDHA12-201ENST00000398631 NAPBQ9H115 298 aa19.05■□□□□ 0.64
PCDHA12-201ENST00000398631 LRRFIP2Q9Y608 721 aaKnown RBP19.05■□□□□ 0.64
PCDHA12-201ENST00000398631 PTPRCP08575 1304 aa19.05■□□□□ 0.64
PCDHA12-201ENST00000398631 CEP57L1Q8IYX8 460 aa19.05■□□□□ 0.64
PCDHA12-201ENST00000398631 BICRAQ9NZM4 1560 aa19.04■□□□□ 0.64
PCDHA12-201ENST00000398631 ZNF76P36508 570 aa19.04■□□□□ 0.64
PCDHA12-201ENST00000398631 DDX11Q96FC9 970 aa19.04■□□□□ 0.64
PCDHA12-201ENST00000398631 TANGO6Q9C0B7 1094 aa19.04■□□□□ 0.64
PCDHA12-201ENST00000398631 URB2Q14146 1524 aaKnown RBP19.04■□□□□ 0.64
PCDHA12-201ENST00000398631 MINDY4BA8MYZ0 360 aa19.04■□□□□ 0.64
PCDHA12-201ENST00000398631 POLR3DP05423 398 aaPredicted RBP19.04■□□□□ 0.64
PCDHA12-201ENST00000398631 ACEP12821 1306 aa19.04■□□□□ 0.64
PCDHA12-201ENST00000398631 RPRD2Q5VT52 1461 aaKnown RBP19.04■□□□□ 0.64
PCDHA12-201ENST00000398631 PRPF40BQ6NWY9 871 aaKnown RBP19.04■□□□□ 0.64
PCDHA12-201ENST00000398631 ANKIB1Q9P2G1 1089 aa19.04■□□□□ 0.64
PCDHA12-201ENST00000398631 ANKRD18BA2A2Z9 1011 aa19.04■□□□□ 0.64
PCDHA12-201ENST00000398631 SPC24Q8NBT2 197 aa19.04■□□□□ 0.64
PCDHA12-201ENST00000398631 SLC5A1P13866 664 aa19.04■□□□□ 0.64
PCDHA12-201ENST00000398631 ZNF608Q9ULD9 1512 aaPredicted RBP19.03■□□□□ 0.64
PCDHA12-201ENST00000398631 UPF3BQ9BZI7 483 aaKnown RBP19.03■□□□□ 0.64
PCDHA12-201ENST00000398631 NUP62CLQ9H1M0 184 aa19.03■□□□□ 0.64
PCDHA12-201ENST00000398631 MKNK2Q9HBH9 465 aa19.03■□□□□ 0.64
PCDHA12-201ENST00000398631 DZIP1Q86YF9 867 aaKnown RBP19.03■□□□□ 0.64
PCDHA12-201ENST00000398631 PIBF1Q8WXW3 757 aa19.03■□□□□ 0.64
PCDHA12-201ENST00000398631 CCDC8Q9H0W5 538 aaPredicted RBP19.03■□□□□ 0.64
PCDHA12-201ENST00000398631 DEF6Q9H4E7 631 aa19.03■□□□□ 0.64
PCDHA12-201ENST00000398631 CCDC196A0A1B0GTZ2 297 aa19.03■□□□□ 0.64
PCDHA12-201ENST00000398631 CRACR2BQ8N4Y2 399 aaPredicted RBP19.02■□□□□ 0.64
PCDHA12-201ENST00000398631 TNRQ92752 1358 aa19.02■□□□□ 0.64
PCDHA12-201ENST00000398631 CBFA2T2O43439 604 aa19.02■□□□□ 0.64
PCDHA12-201ENST00000398631 ZBTB3Q9H5J0 574 aa19.02■□□□□ 0.64
PCDHA12-201ENST00000398631 PATL2C9JE40 543 aaKnown RBP19.02■□□□□ 0.64
PCDHA12-201ENST00000398631 PAF1Q8N7H5 531 aa19.02■□□□□ 0.63
PCDHA12-201ENST00000398631 BCL11BQ9C0K0 894 aaPredicted RBP19.02■□□□□ 0.63
PCDHA12-201ENST00000398631 CEP131Q9UPN4 1083 aa19.02■□□□□ 0.63
PCDHA12-201ENST00000398631 TXLNBQ8N3L3 684 aa19.01■□□□□ 0.63
PCDHA12-201ENST00000398631 MPHOSPH10O00566 681 aaKnown RBP19.01■□□□□ 0.63
PCDHA12-201ENST00000398631 HMGN5P82970 282 aaKnown RBP19■□□□□ 0.63
PCDHA12-201ENST00000398631 TRIM27P14373 513 aa19■□□□□ 0.63
PCDHA12-201ENST00000398631 MCM4P33991 863 aa19■□□□□ 0.63
PCDHA12-201ENST00000398631 C20orf194Q5TEA3 1177 aa19■□□□□ 0.63
PCDHA12-201ENST00000398631 ANKRD36BQ8N2N9 1353 aa19■□□□□ 0.63
PCDHA12-201ENST00000398631 HMGB1P09429 215 aaKnown RBP19■□□□□ 0.63
PCDHA12-201ENST00000398631 GPTP24298 496 aa19■□□□□ 0.63
PCDHA12-201ENST00000398631 CCDC83Q8IWF9 413 aa19■□□□□ 0.63
PCDHA12-201ENST00000398631 CTCFLQ8NI51 663 aaPredicted RBP18.99■□□□□ 0.63
PCDHA12-201ENST00000398631 ANKRD24Q8TF21 1146 aa18.99■□□□□ 0.63
PCDHA12-201ENST00000398631 RPGRQ92834 1020 aaKnown RBP18.99■□□□□ 0.63
PCDHA12-201ENST00000398631 SEC63Q9UGP8 760 aaKnown RBP18.99■□□□□ 0.63
PCDHA12-201ENST00000398631 FERMT3Q86UX7 667 aa18.99■□□□□ 0.63
PCDHA12-201ENST00000398631 IQCA1Q86XH1 822 aa18.99■□□□□ 0.63
PCDHA12-201ENST00000398631 SH2B1Q9NRF2 756 aaPredicted RBP18.99■□□□□ 0.63
PCDHA12-201ENST00000398631 KDM5BQ9UGL1 1544 aa18.99■□□□□ 0.63
PCDHA12-201ENST00000398631 NOM1Q5C9Z4 860 aaKnown RBP18.98■□□□□ 0.63
PCDHA12-201ENST00000398631 RNF41Q9H4P4 317 aaPredicted RBP18.98■□□□□ 0.63
PCDHA12-201ENST00000398631 SLF2Q8IX21 1173 aa18.97■□□□□ 0.63
PCDHA12-201ENST00000398631 ECHDC1Q9NTX5 307 aa18.97■□□□□ 0.63
PCDHA12-201ENST00000398631 FBXO3Q9UK99 471 aa18.97■□□□□ 0.63
PCDHA12-201ENST00000398631 MAP3K2Q9Y2U5 619 aa18.97■□□□□ 0.63
PCDHA12-201ENST00000398631 ZNF213O14771 459 aa18.97■□□□□ 0.63
PCDHA12-201ENST00000398631 LDHAL6AQ6ZMR3 332 aa18.97■□□□□ 0.63
PCDHA12-201ENST00000398631 ZNF444Q8N0Y2 327 aaPredicted RBP18.97■□□□□ 0.63
PCDHA12-201ENST00000398631 CDC5LQ99459 802 aaKnown RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms