RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 ATP2B1P20020 1258 aa16.89■□□□□ 0.29
PCDHGA11-201ENST00000398587 HOMER1Q86YM7 354 aa16.89■□□□□ 0.29
PCDHGA11-201ENST00000398587 TRIM22Q8IYM9 498 aa16.89■□□□□ 0.29
PCDHGA11-201ENST00000398587 HSP90AA2PQ14568 343 aaPredicted RBP16.88■□□□□ 0.29
PCDHGA11-201ENST00000398587 PI4KAP2A4QPH2 592 aa16.88■□□□□ 0.29
PCDHGA11-201ENST00000398587 CASTP20810 708 aaKnown RBP16.88■□□□□ 0.29
PCDHGA11-201ENST00000398587 AEBP2Q6ZN18 517 aaPredicted RBP16.88■□□□□ 0.29
PCDHGA11-201ENST00000398587 PI4KAP1Q8N8J0 262 aa16.88■□□□□ 0.29
PCDHGA11-201ENST00000398587 CCDC85AQ96PX6 553 aaPredicted RBP16.88■□□□□ 0.29
PCDHGA11-201ENST00000398587 CEP89Q96ST8 783 aa16.88■□□□□ 0.29
PCDHGA11-201ENST00000398587 TBC1D2Q9BYX2 928 aa16.88■□□□□ 0.29
PCDHGA11-201ENST00000398587 BOLA2Q9H3K6 86 aa16.88■□□□□ 0.29
PCDHGA11-201ENST00000398587 TRIM5Q9C035 493 aa16.88■□□□□ 0.29
PCDHGA11-201ENST00000398587 CCDC173Q0VFZ6 552 aa16.87■□□□□ 0.29
PCDHGA11-201ENST00000398587 GOLGA6L1Q8N7Z2 621 aa16.87■□□□□ 0.29
PCDHGA11-201ENST00000398587 ZRANB1Q9UGI0 708 aa16.87■□□□□ 0.29
PCDHGA11-201ENST00000398587 ABCC1P33527 1531 aa16.87■□□□□ 0.29
PCDHGA11-201ENST00000398587 ZMYM3Q14202 1370 aa16.87■□□□□ 0.29
PCDHGA11-201ENST00000398587 METTL24Q5JXM2 366 aa16.87■□□□□ 0.29
PCDHGA11-201ENST00000398587 CCAR2Q8N163 923 aaKnown RBP16.87■□□□□ 0.29
PCDHGA11-201ENST00000398587 CEBPZQ03701 1054 aaKnown RBP16.87■□□□□ 0.29
PCDHGA11-201ENST00000398587 TBC1D9Q6ZT07 1266 aa16.87■□□□□ 0.29
PCDHGA11-201ENST00000398587 TCEAL9Q9UHQ7 104 aa16.87■□□□□ 0.29
PCDHGA11-201ENST00000398587 FLT4P35916 1363 aa16.86■□□□□ 0.29
PCDHGA11-201ENST00000398587 A0A087WZG4 1122 aa16.86■□□□□ 0.29
PCDHGA11-201ENST00000398587 IGHMBP2P38935 993 aaKnown RBP16.86■□□□□ 0.29
PCDHGA11-201ENST00000398587 NUCB1Q02818 461 aa16.86■□□□□ 0.29
PCDHGA11-201ENST00000398587 C8orf58Q8NAV2 365 aa16.86■□□□□ 0.29
PCDHGA11-201ENST00000398587 KDM4AO75164 1064 aa16.86■□□□□ 0.29
PCDHGA11-201ENST00000398587 CCDC192P0DO97 292 aa16.86■□□□□ 0.29
PCDHGA11-201ENST00000398587 MRPL50Q8N5N7 158 aaKnown RBP16.86■□□□□ 0.29
PCDHGA11-201ENST00000398587 ECHDC1Q9NTX5 307 aa16.86■□□□□ 0.29
PCDHGA11-201ENST00000398587 MAP3K2Q9Y2U5 619 aa16.86■□□□□ 0.29
PCDHGA11-201ENST00000398587 HSP90AB3PQ58FF7 597 aa16.85■□□□□ 0.29
PCDHGA11-201ENST00000398587 TBC1D32Q96NH3 1257 aa16.85■□□□□ 0.29
PCDHGA11-201ENST00000398587 MTMR7Q9Y216 660 aa16.85■□□□□ 0.29
PCDHGA11-201ENST00000398587 PRPF40BQ6NWY9 871 aaKnown RBP16.85■□□□□ 0.29
PCDHGA11-201ENST00000398587 IDH1O75874 414 aaKnown RBP16.85■□□□□ 0.29
PCDHGA11-201ENST00000398587 PPP1R42Q7Z4L9 355 aa16.85■□□□□ 0.29
PCDHGA11-201ENST00000398587 CCDC8Q9H0W5 538 aaPredicted RBP16.85■□□□□ 0.29
PCDHGA11-201ENST00000398587 U3KPZ7 1027 aaPredicted RBP16.85■□□□□ 0.29
PCDHGA11-201ENST00000398587 CDKL5O76039 1030 aa16.85■□□□□ 0.29
PCDHGA11-201ENST00000398587 GRPEL1Q9HAV7 217 aa16.85■□□□□ 0.29
PCDHGA11-201ENST00000398587 GCC2Q8IWJ2 1684 aa16.85■□□□□ 0.29
PCDHGA11-201ENST00000398587 MEIS3Q99687 375 aa16.84■□□□□ 0.29
PCDHGA11-201ENST00000398587 TBX22Q9Y458 520 aa16.84■□□□□ 0.29
PCDHGA11-201ENST00000398587 ME1P48163 572 aa16.84■□□□□ 0.29
PCDHGA11-201ENST00000398587 ANKRD44Q8N8A2 993 aa16.84■□□□□ 0.29
PCDHGA11-201ENST00000398587 CFAP45Q9UL16 551 aa16.84■□□□□ 0.29
PCDHGA11-201ENST00000398587 BRPF3Q9ULD4 1205 aa16.84■□□□□ 0.29
PCDHGA11-201ENST00000398587 CCDC69A6NI79 296 aa16.84■□□□□ 0.29
PCDHGA11-201ENST00000398587 IFIT1P09914 478 aaKnown RBP16.84■□□□□ 0.29
PCDHGA11-201ENST00000398587 IMMTQ16891 758 aaKnown RBP16.84■□□□□ 0.29
PCDHGA11-201ENST00000398587 TTC22Q5TAA0 569 aa16.84■□□□□ 0.29
PCDHGA11-201ENST00000398587 VAMP4O75379 141 aa16.84■□□□□ 0.29
PCDHGA11-201ENST00000398587 ZNF652Q9Y2D9 606 aa16.84■□□□□ 0.29
PCDHGA11-201ENST00000398587 ARHGEF5Q12774 1597 aa16.83■□□□□ 0.29
PCDHGA11-201ENST00000398587 IFIT5Q13325 482 aaKnown RBP16.83■□□□□ 0.29
PCDHGA11-201ENST00000398587 TDO2P48775 406 aa16.83■□□□□ 0.28
PCDHGA11-201ENST00000398587 TNMDQ9H2S6 317 aa16.83■□□□□ 0.28
PCDHGA11-201ENST00000398587 SNRPA1P09661 255 aaKnown RBP16.83■□□□□ 0.28
PCDHGA11-201ENST00000398587 TEX13AQ9BXU3 409 aaPredicted RBP16.83■□□□□ 0.28
PCDHGA11-201ENST00000398587 SH2B1Q9NRF2 756 aaPredicted RBP16.83■□□□□ 0.28
PCDHGA11-201ENST00000398587 LRP2BPQ9P2M1 347 aa16.83■□□□□ 0.28
PCDHGA11-201ENST00000398587 SPATA32Q96LK8 384 aa16.82■□□□□ 0.28
PCDHGA11-201ENST00000398587 A0A0U1RQG5 324 aaPredicted RBP16.82■□□□□ 0.28
PCDHGA11-201ENST00000398587 EVI5LQ96CN4 794 aa16.82■□□□□ 0.28
PCDHGA11-201ENST00000398587 PHACTR3Q96KR7 559 aa16.82■□□□□ 0.28
PCDHGA11-201ENST00000398587 MBD5Q9P267 1494 aa16.81■□□□□ 0.28
PCDHGA11-201ENST00000398587 TXLNAP40222 546 aa16.81■□□□□ 0.28
PCDHGA11-201ENST00000398587 CCDC70Q6NSX1 233 aa16.81■□□□□ 0.28
PCDHGA11-201ENST00000398587 AIDAQ96BJ3 306 aa16.81■□□□□ 0.28
PCDHGA11-201ENST00000398587 NPHP3Q7Z494 1330 aa16.81■□□□□ 0.28
PCDHGA11-201ENST00000398587 MTHFSDQ2M296 383 aaKnown RBP16.81■□□□□ 0.28
PCDHGA11-201ENST00000398587 RAI14Q9P0K7 980 aa16.81■□□□□ 0.28
PCDHGA11-201ENST00000398587 ANXA1P04083 346 aa16.81■□□□□ 0.28
PCDHGA11-201ENST00000398587 ATP10AO60312 1499 aa16.81■□□□□ 0.28
PCDHGA11-201ENST00000398587 PIP4K2BP78356 416 aa16.81■□□□□ 0.28
PCDHGA11-201ENST00000398587 CHRNA2Q15822 529 aa16.81■□□□□ 0.28
PCDHGA11-201ENST00000398587 AKAP4Q5JQC9 854 aa16.81■□□□□ 0.28
PCDHGA11-201ENST00000398587 CCDC83Q8IWF9 413 aa16.81■□□□□ 0.28
PCDHGA11-201ENST00000398587 UBAC1Q9BSL1 405 aa16.81■□□□□ 0.28
PCDHGA11-201ENST00000398587 EXOC5O00471 708 aa16.8■□□□□ 0.28
PCDHGA11-201ENST00000398587 RLBP1P12271 317 aa16.8■□□□□ 0.28
PCDHGA11-201ENST00000398587 TRPM2O94759 1503 aa16.8■□□□□ 0.28
PCDHGA11-201ENST00000398587 INSRP06213 1382 aa16.8■□□□□ 0.28
PCDHGA11-201ENST00000398587 ZBTB3Q9H5J0 574 aa16.8■□□□□ 0.28
PCDHGA11-201ENST00000398587 RHPN1Q8TCX5 695 aa16.79■□□□□ 0.28
PCDHGA11-201ENST00000398587 LIMCH1Q9UPQ0 1083 aa16.79■□□□□ 0.28
PCDHGA11-201ENST00000398587 UBE3BQ7Z3V4 1068 aa16.79■□□□□ 0.28
PCDHGA11-201ENST00000398587 NUP133Q8WUM0 1156 aa16.79■□□□□ 0.28
PCDHGA11-201ENST00000398587 ANKRD13DQ6ZTN6 518 aa16.79■□□□□ 0.28
PCDHGA11-201ENST00000398587 CCDC43Q96MW1 224 aaKnown RBP16.79■□□□□ 0.28
PCDHGA11-201ENST00000398587 TRMT112Q9UI30 125 aaKnown RBP16.79■□□□□ 0.28
PCDHGA11-201ENST00000398587 TSPYL6Q8N831 410 aa16.79■□□□□ 0.28
PCDHGA11-201ENST00000398587 CHPF2Q9P2E5 772 aa16.79■□□□□ 0.28
PCDHGA11-201ENST00000398587 ADGBQ8N7X0 1667 aa16.79■□□□□ 0.28
PCDHGA11-201ENST00000398587 SPATA31E1Q6ZUB1 1445 aa16.79■□□□□ 0.28
PCDHGA11-201ENST00000398587 IKQ13123 557 aaPredicted RBP16.78■□□□□ 0.28
PCDHGA11-201ENST00000398587 MSH6P52701 1360 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms