RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 PRPF40BQ6NWY9 871 aaKnown RBP13.28□□□□□ -0.28
CSGALNACT1-202ENST00000397998 GPT2Q8TD30 523 aa13.28□□□□□ -0.28
CSGALNACT1-202ENST00000397998 GNL2Q13823 731 aaKnown RBP13.28□□□□□ -0.28
CSGALNACT1-202ENST00000397998 NUP62CLQ9H1M0 184 aa13.28□□□□□ -0.28
CSGALNACT1-202ENST00000397998 LIMCH1Q9UPQ0 1083 aa13.28□□□□□ -0.28
CSGALNACT1-202ENST00000397998 NCKAP5LQ9HCH0 1330 aa13.28□□□□□ -0.28
CSGALNACT1-202ENST00000397998 PDCP20941 246 aa13.27□□□□□ -0.29
CSGALNACT1-202ENST00000397998 CKAP2LQ8IYA6 745 aa13.27□□□□□ -0.29
CSGALNACT1-202ENST00000397998 CLASP1Q7Z460 1538 aa13.27□□□□□ -0.29
CSGALNACT1-202ENST00000397998 SPDYE4A6NLX3 237 aa13.27□□□□□ -0.29
CSGALNACT1-202ENST00000397998 C17orf53Q8N3J3 647 aaPredicted RBP13.27□□□□□ -0.29
CSGALNACT1-202ENST00000397998 CD109Q6YHK3 1445 aa13.26□□□□□ -0.29
CSGALNACT1-202ENST00000397998 G2E3Q7L622 706 aa13.26□□□□□ -0.29
CSGALNACT1-202ENST00000397998 PSMA5P28066 241 aa13.26□□□□□ -0.29
CSGALNACT1-202ENST00000397998 MSH6P52701 1360 aa13.26□□□□□ -0.29
CSGALNACT1-202ENST00000397998 TRPM2O94759 1503 aa13.26□□□□□ -0.29
CSGALNACT1-202ENST00000397998 PPP4R3BQ5MIZ7 849 aa13.26□□□□□ -0.29
CSGALNACT1-202ENST00000397998 TSC1Q92574 1164 aa13.26□□□□□ -0.29
CSGALNACT1-202ENST00000397998 KIF2CQ99661 725 aa13.26□□□□□ -0.29
CSGALNACT1-202ENST00000397998 EID1Q9Y6B2 187 aa13.26□□□□□ -0.29
CSGALNACT1-202ENST00000397998 ABCC4O15439 1325 aa13.26□□□□□ -0.29
CSGALNACT1-202ENST00000397998 GADD45BO75293 160 aaPredicted RBP13.25□□□□□ -0.29
CSGALNACT1-202ENST00000397998 MAP3K11Q16584 847 aa13.25□□□□□ -0.29
CSGALNACT1-202ENST00000397998 UBE2HP62256 183 aa13.25□□□□□ -0.29
CSGALNACT1-202ENST00000397998 TPM4P67936 248 aa13.25□□□□□ -0.29
CSGALNACT1-202ENST00000397998 CCDC73Q6ZRK6 1079 aa13.25□□□□□ -0.29
CSGALNACT1-202ENST00000397998 KIF1BPQ96EK5 621 aa13.25□□□□□ -0.29
CSGALNACT1-202ENST00000397998 SIL1Q9H173 461 aa13.25□□□□□ -0.29
CSGALNACT1-202ENST00000397998 PREX2Q70Z35 1606 aa13.25□□□□□ -0.29
CSGALNACT1-202ENST00000397998 IL13P35225 146 aa13.25□□□□□ -0.29
CSGALNACT1-202ENST00000397998 CYB5RLQ6IPT4 315 aa13.25□□□□□ -0.29
CSGALNACT1-202ENST00000397998 SPATA32Q96LK8 384 aa13.25□□□□□ -0.29
CSGALNACT1-202ENST00000397998 TFIP11Q9UBB9 837 aaKnown RBP13.25□□□□□ -0.29
CSGALNACT1-202ENST00000397998 E9PCH4 1651 aa13.25□□□□□ -0.29
CSGALNACT1-202ENST00000397998 FOXO3O43524 673 aa13.24□□□□□ -0.29
CSGALNACT1-202ENST00000397998 ZSCAN22P10073 491 aaPredicted RBP13.24□□□□□ -0.29
CSGALNACT1-202ENST00000397998 CHMLP26374 656 aa13.24□□□□□ -0.29
CSGALNACT1-202ENST00000397998 GJB2P29033 226 aa13.24□□□□□ -0.29
CSGALNACT1-202ENST00000397998 EIF4A2Q14240 407 aaKnown RBP13.24□□□□□ -0.29
CSGALNACT1-202ENST00000397998 CCDC112Q8NEF3 446 aa13.24□□□□□ -0.29
CSGALNACT1-202ENST00000397998 UVSSAQ2YD98 709 aa13.24□□□□□ -0.29
CSGALNACT1-202ENST00000397998 C16orf45Q96MC5 204 aaPredicted RBP13.24□□□□□ -0.29
CSGALNACT1-202ENST00000397998 IQGAP3Q86VI3 1631 aa13.24□□□□□ -0.29
CSGALNACT1-202ENST00000397998 BLOC1S2Q6QNY1 142 aa13.24□□□□□ -0.29
CSGALNACT1-202ENST00000397998 ANAPC15P60006 121 aa13.23□□□□□ -0.29
CSGALNACT1-202ENST00000397998 C1orf141Q5JVX7 400 aa13.23□□□□□ -0.29
CSGALNACT1-202ENST00000397998 PPP1R42Q7Z4L9 355 aa13.23□□□□□ -0.29
CSGALNACT1-202ENST00000397998 FILIP1Q7Z7B0 1213 aa13.23□□□□□ -0.29
CSGALNACT1-202ENST00000397998 AACSQ86V21 672 aa13.23□□□□□ -0.29
CSGALNACT1-202ENST00000397998 HOMER1Q86YM7 354 aa13.23□□□□□ -0.29
CSGALNACT1-202ENST00000397998 PRIMPOLQ96LW4 560 aa13.23□□□□□ -0.29
CSGALNACT1-202ENST00000397998 FMNL2Q96PY5 1086 aa13.23□□□□□ -0.29
CSGALNACT1-202ENST00000397998 OSCARQ8IYS5 282 aa13.23□□□□□ -0.29
CSGALNACT1-202ENST00000397998 SDF4Q9BRK5 362 aa13.23□□□□□ -0.29
CSGALNACT1-202ENST00000397998 ATP7AQ04656 1500 aa13.23□□□□□ -0.29
CSGALNACT1-202ENST00000397998 RAB11FIP3O75154 756 aa13.23□□□□□ -0.29
CSGALNACT1-202ENST00000397998 DNM1Q05193 864 aaKnown RBP13.23□□□□□ -0.29
CSGALNACT1-202ENST00000397998 NECAB1Q8N987 351 aa13.23□□□□□ -0.29
CSGALNACT1-202ENST00000397998 ZSCAN31Q96LW9 406 aaPredicted RBP13.23□□□□□ -0.29
CSGALNACT1-202ENST00000397998 ZNF500O60304 480 aaPredicted RBP13.22□□□□□ -0.29
CSGALNACT1-202ENST00000397998 CPA1P15085 419 aa13.22□□□□□ -0.29
CSGALNACT1-202ENST00000397998 TAF7Q15545 349 aaPredicted RBP13.22□□□□□ -0.29
CSGALNACT1-202ENST00000397998 NSFL1CQ9UNZ2 370 aaKnown RBP13.22□□□□□ -0.29
CSGALNACT1-202ENST00000397998 ZNF330Q9Y3S2 320 aaPredicted RBP13.22□□□□□ -0.29
CSGALNACT1-202ENST00000397998 NEXNQ0ZGT2 675 aa13.22□□□□□ -0.29
CSGALNACT1-202ENST00000397998 GORABQ5T7V8 394 aa13.22□□□□□ -0.29
CSGALNACT1-202ENST00000397998 SLC26A8Q96RN1 970 aa13.22□□□□□ -0.29
CSGALNACT1-202ENST00000397998 PALD1Q9ULE6 856 aa13.22□□□□□ -0.29
CSGALNACT1-202ENST00000397998 GLRX3O76003 335 aaKnown RBP13.22□□□□□ -0.29
CSGALNACT1-202ENST00000397998 INTS4Q96HW7 963 aaKnown RBP13.22□□□□□ -0.29
CSGALNACT1-202ENST00000397998 GNAT3A8MTJ3 354 aa13.22□□□□□ -0.29
CSGALNACT1-202ENST00000397998 DDX11Q96FC9 970 aa13.22□□□□□ -0.29
CSGALNACT1-202ENST00000397998 TCEANC2Q96MN5 208 aa13.22□□□□□ -0.29
CSGALNACT1-202ENST00000397998 BRD1O95696 1058 aa13.21□□□□□ -0.29
CSGALNACT1-202ENST00000397998 UNC13BO14795 1591 aa13.21□□□□□ -0.29
CSGALNACT1-202ENST00000397998 FAM69CQ0P6D2 419 aa13.21□□□□□ -0.29
CSGALNACT1-202ENST00000397998 ABTB2Q8N961 1025 aa13.21□□□□□ -0.29
CSGALNACT1-202ENST00000397998 ANXA1P04083 346 aa13.21□□□□□ -0.3
CSGALNACT1-202ENST00000397998 TERF1P54274 439 aa13.21□□□□□ -0.3
CSGALNACT1-202ENST00000397998 AK2P54819 239 aa13.21□□□□□ -0.3
CSGALNACT1-202ENST00000397998 ATP8B2P98198 1209 aa13.21□□□□□ -0.3
CSGALNACT1-202ENST00000397998 RHPN1Q8TCX5 695 aa13.21□□□□□ -0.3
CSGALNACT1-202ENST00000397998 MADDQ8WXG6 1647 aa13.21□□□□□ -0.3
CSGALNACT1-202ENST00000397998 ZFYVE9O95405 1425 aa13.2□□□□□ -0.3
CSGALNACT1-202ENST00000397998 RIMS2Q9UQ26 1411 aa13.2□□□□□ -0.3
CSGALNACT1-202ENST00000397998 KINO60870 393 aaKnown RBP13.2□□□□□ -0.3
CSGALNACT1-202ENST00000397998 RIC3Q7Z5B4 369 aa13.2□□□□□ -0.3
CSGALNACT1-202ENST00000397998 PPP6R1Q9UPN7 881 aa13.2□□□□□ -0.3
CSGALNACT1-202ENST00000397998 A0A0G2JS52 829 aa13.2□□□□□ -0.3
CSGALNACT1-202ENST00000397998 IGSF3O75054 1194 aa13.2□□□□□ -0.3
CSGALNACT1-202ENST00000397998 SYT1P21579 422 aa13.2□□□□□ -0.3
CSGALNACT1-202ENST00000397998 CCAR2Q8N163 923 aaKnown RBP13.2□□□□□ -0.3
CSGALNACT1-202ENST00000397998 DNAJC2Q99543 621 aaKnown RBP13.2□□□□□ -0.3
CSGALNACT1-202ENST00000397998 DDX58O95786 925 aaKnown RBP13.2□□□□□ -0.3
CSGALNACT1-202ENST00000397998 F13A1P00488 732 aa13.2□□□□□ -0.3
CSGALNACT1-202ENST00000397998 NPATQ14207 1427 aa13.2□□□□□ -0.3
CSGALNACT1-202ENST00000397998 USHBP1Q8N6Y0 703 aa13.2□□□□□ -0.3
CSGALNACT1-202ENST00000397998 PNMA6EA0A0J9YXQ4 647 aa13.19□□□□□ -0.3
CSGALNACT1-202ENST00000397998 TNNT1P13805 278 aa13.19□□□□□ -0.3
CSGALNACT1-202ENST00000397998 BOLA2Q9H3K6 86 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms