RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 TAF7Q15545 349 aaPredicted RBP25.42■■□□□ 1.66
MAP1LC3A-203ENST00000397709 IFT57Q9NWB7 429 aa25.42■■□□□ 1.66
MAP1LC3A-203ENST00000397709 TMOD3Q9NYL9 352 aa25.42■■□□□ 1.66
MAP1LC3A-203ENST00000397709 PAPPAQ13219 1627 aa25.41■■□□□ 1.66
MAP1LC3A-203ENST00000397709 GOLGA2Q08379 1002 aa25.41■■□□□ 1.66
MAP1LC3A-203ENST00000397709 CFAP44Q96MT7 982 aa25.41■■□□□ 1.66
MAP1LC3A-203ENST00000397709 KDM3BQ7LBC6 1761 aa25.41■■□□□ 1.66
MAP1LC3A-203ENST00000397709 KAT6BQ8WYB5 2073 aa25.4■■□□□ 1.66
MAP1LC3A-203ENST00000397709 SPINK5Q9NQ38 1064 aaPredicted RBP25.4■■□□□ 1.66
MAP1LC3A-203ENST00000397709 BABAM1Q9NWV8 329 aa25.4■■□□□ 1.66
MAP1LC3A-203ENST00000397709 CHL1O00533 1208 aa25.39■■□□□ 1.66
MAP1LC3A-203ENST00000397709 KCNQ2O43526 872 aa25.39■■□□□ 1.66
MAP1LC3A-203ENST00000397709 GNAI1P63096 354 aa25.39■■□□□ 1.66
MAP1LC3A-203ENST00000397709 PIGBQ92521 554 aa25.39■■□□□ 1.66
MAP1LC3A-203ENST00000397709 SYTL4Q96C24 671 aaPredicted RBP25.39■■□□□ 1.66
MAP1LC3A-203ENST00000397709 BTBD11A6QL63 1104 aa25.38■■□□□ 1.65
MAP1LC3A-203ENST00000397709 E9PSI1 815 aa25.37■■□□□ 1.65
MAP1LC3A-203ENST00000397709 SLFN5Q08AF3 891 aa25.37■■□□□ 1.65
MAP1LC3A-203ENST00000397709 CDCA7LQ96GN5 454 aa25.37■■□□□ 1.65
MAP1LC3A-203ENST00000397709 LAS1LQ9Y4W2 734 aaKnown RBP25.37■■□□□ 1.65
MAP1LC3A-203ENST00000397709 BTAF1O14981 1849 aa25.37■■□□□ 1.65
MAP1LC3A-203ENST00000397709 MIS18AQ9NYP9 233 aa25.36■■□□□ 1.65
MAP1LC3A-203ENST00000397709 EP400Q96L91 3159 aa25.36■■□□□ 1.65
MAP1LC3A-203ENST00000397709 PTF1AQ7RTS3 328 aa25.35■■□□□ 1.65
MAP1LC3A-203ENST00000397709 BCL11BQ9C0K0 894 aaPredicted RBP25.35■■□□□ 1.65
MAP1LC3A-203ENST00000397709 MBIPQ9NS73 344 aa25.35■■□□□ 1.65
MAP1LC3A-203ENST00000397709 TSPYL4Q9UJ04 414 aa25.35■■□□□ 1.65
MAP1LC3A-203ENST00000397709 TRMT2AQ8IZ69 625 aaKnown RBP25.34■■□□□ 1.65
MAP1LC3A-203ENST00000397709 MYH16Q9H6N6 1097 aa25.34■■□□□ 1.65
MAP1LC3A-203ENST00000397709 FANCIQ9NVI1 1328 aa25.34■■□□□ 1.65
MAP1LC3A-203ENST00000397709 UBR2Q8IWV8 1755 aa25.33■■□□□ 1.65
MAP1LC3A-203ENST00000397709 TRIM37O94972 964 aa25.32■■□□□ 1.64
MAP1LC3A-203ENST00000397709 SLC39A6Q13433 755 aa25.32■■□□□ 1.64
MAP1LC3A-203ENST00000397709 ZNF790Q6PG37 636 aa25.32■■□□□ 1.64
MAP1LC3A-203ENST00000397709 TSR2Q969E8 191 aaKnown RBP25.32■■□□□ 1.64
MAP1LC3A-203ENST00000397709 ATG3Q9NT62 314 aa25.32■■□□□ 1.64
MAP1LC3A-203ENST00000397709 KCPQ6ZWJ8 1503 aa25.32■■□□□ 1.64
MAP1LC3A-203ENST00000397709 KCNQ3O43525 872 aa25.31■■□□□ 1.64
MAP1LC3A-203ENST00000397709 ASAP1Q9ULH1 1129 aa25.31■■□□□ 1.64
MAP1LC3A-203ENST00000397709 TNS1Q9HBL0 1735 aaKnown RBP25.31■■□□□ 1.64
MAP1LC3A-203ENST00000397709 DUSP27Q5VZP5 1158 aa25.3■■□□□ 1.64
MAP1LC3A-203ENST00000397709 TTC5Q8N0Z6 440 aa25.28■■□□□ 1.64
MAP1LC3A-203ENST00000397709 EIF4A1P60842 406 aaKnown RBP25.27■■□□□ 1.64
MAP1LC3A-203ENST00000397709 SMARCC1Q92922 1105 aaPredicted RBP25.27■■□□□ 1.64
MAP1LC3A-203ENST00000397709 PALLDQ8WX93 1383 aa25.26■■□□□ 1.63
MAP1LC3A-203ENST00000397709 HEG1Q9ULI3 1381 aa25.26■■□□□ 1.63
MAP1LC3A-203ENST00000397709 ZNF496Q96IT1 587 aaPredicted RBP25.25■■□□□ 1.63
MAP1LC3A-203ENST00000397709 LY75O60449 1722 aa25.25■■□□□ 1.63
MAP1LC3A-203ENST00000397709 FMNL2Q96PY5 1086 aa25.24■■□□□ 1.63
MAP1LC3A-203ENST00000397709 CICQ96RK0 1608 aaPredicted RBP25.23■■□□□ 1.63
MAP1LC3A-203ENST00000397709 EXOSC9Q06265 439 aaKnown RBP25.22■■□□□ 1.63
MAP1LC3A-203ENST00000397709 KRT24Q2M2I5 525 aa25.22■■□□□ 1.63
MAP1LC3A-203ENST00000397709 ZNF831Q5JPB2 1677 aa25.22■■□□□ 1.63
MAP1LC3A-203ENST00000397709 RGPD3A6NKT7 1758 aaPredicted RBP25.21■■□□□ 1.63
MAP1LC3A-203ENST00000397709 RGPD4Q7Z3J3 1758 aa25.21■■□□□ 1.63
MAP1LC3A-203ENST00000397709 C5P01031 1676 aa25.21■■□□□ 1.63
MAP1LC3A-203ENST00000397709 PTCD1O75127 700 aaKnown RBP25.21■■□□□ 1.63
MAP1LC3A-203ENST00000397709 C8orf58Q8NAV2 365 aa25.21■■□□□ 1.63
MAP1LC3A-203ENST00000397709 VSIG10Q8N0Z9 540 aa25.2■■□□□ 1.62
MAP1LC3A-203ENST00000397709 SLC4A9Q96Q91 983 aa25.2■■□□□ 1.62
MAP1LC3A-203ENST00000397709 TJP1Q07157 1748 aa25.2■■□□□ 1.62
MAP1LC3A-203ENST00000397709 GIGYF1O75420 1035 aaPredicted RBP25.19■■□□□ 1.62
MAP1LC3A-203ENST00000397709 ILDR2Q71H61 639 aa25.19■■□□□ 1.62
MAP1LC3A-203ENST00000397709 RBM42Q9BTD8 480 aaKnown RBP25.19■■□□□ 1.62
MAP1LC3A-203ENST00000397709 LAMB4A4D0S4 1761 aa25.18■■□□□ 1.62
MAP1LC3A-203ENST00000397709 LOC102724428A0A0B4J2F2 783 aa25.18■■□□□ 1.62
MAP1LC3A-203ENST00000397709 PLSCR1O15162 318 aa25.18■■□□□ 1.62
MAP1LC3A-203ENST00000397709 APBA3O96018 575 aa25.18■■□□□ 1.62
MAP1LC3A-203ENST00000397709 SIK1P57059 783 aa25.18■■□□□ 1.62
MAP1LC3A-203ENST00000397709 TSPYL6Q8N831 410 aa25.18■■□□□ 1.62
MAP1LC3A-203ENST00000397709 SOS1Q07889 1333 aaPredicted RBP25.17■■□□□ 1.62
MAP1LC3A-203ENST00000397709 HOXB7P09629 217 aa25.17■■□□□ 1.62
MAP1LC3A-203ENST00000397709 SNRPA1P09661 255 aaKnown RBP25.17■■□□□ 1.62
MAP1LC3A-203ENST00000397709 TWISTNBQ3B726 338 aaPredicted RBP25.16■■□□□ 1.62
MAP1LC3A-203ENST00000397709 PRAMEF22A3QJZ6 481 aa25.15■■□□□ 1.62
MAP1LC3A-203ENST00000397709 CCDC125Q86Z20 511 aa25.15■■□□□ 1.62
MAP1LC3A-203ENST00000397709 ELL2O00472 640 aaPredicted RBP25.14■■□□□ 1.62
MAP1LC3A-203ENST00000397709 VAMP4O75379 141 aa25.14■■□□□ 1.62
MAP1LC3A-203ENST00000397709 CT47B1P0C2W7 299 aaPredicted RBP25.14■■□□□ 1.62
MAP1LC3A-203ENST00000397709 COL5A3P25940 1745 aaPredicted RBP25.13■■□□□ 1.61
MAP1LC3A-203ENST00000397709 ATP6V1AP38606 617 aa25.13■■□□□ 1.61
MAP1LC3A-203ENST00000397709 SF3B2Q13435 895 aaKnown RBP25.13■■□□□ 1.61
MAP1LC3A-203ENST00000397709 DNAJC10Q8IXB1 793 aa25.13■■□□□ 1.61
MAP1LC3A-203ENST00000397709 ITPK1Q13572 414 aa25.12■■□□□ 1.61
MAP1LC3A-203ENST00000397709 TEX13AQ9BXU3 409 aaPredicted RBP25.12■■□□□ 1.61
MAP1LC3A-203ENST00000397709 CCNL1Q9UK58 526 aaPredicted RBP25.12■■□□□ 1.61
MAP1LC3A-203ENST00000397709 SLC27A3Q5K4L6 730 aa25.11■■□□□ 1.61
MAP1LC3A-203ENST00000397709 USP16Q9Y5T5 823 aa25.11■■□□□ 1.61
MAP1LC3A-203ENST00000397709 TAF1LQ8IZX4 1826 aa25.11■■□□□ 1.61
MAP1LC3A-203ENST00000397709 TXNRD1Q16881 649 aa25.1■■□□□ 1.61
MAP1LC3A-203ENST00000397709 PROM2Q8N271 834 aa25.1■■□□□ 1.61
MAP1LC3A-203ENST00000397709 UPF1Q92900 1129 aaKnown RBP eCLIP25.1■■□□□ 1.61
MAP1LC3A-203ENST00000397709 BAG6P46379 1132 aa25.09■■□□□ 1.61
MAP1LC3A-203ENST00000397709 CAMKK2Q96RR4 588 aa25.09■■□□□ 1.61
MAP1LC3A-203ENST00000397709 LRRC4BQ9NT99 713 aa25.09■■□□□ 1.61
MAP1LC3A-203ENST00000397709 RREB1Q92766 1687 aa25.08■■□□□ 1.61
MAP1LC3A-203ENST00000397709 KCNQ4P56696 695 aa25.08■■□□□ 1.61
MAP1LC3A-203ENST00000397709 HDGFL1Q5TGJ6 251 aa25.08■■□□□ 1.61
MAP1LC3A-203ENST00000397709 ZNF428Q96B54 188 aa25.08■■□□□ 1.61
MAP1LC3A-203ENST00000397709 CYP19A1P11511 503 aaPredicted RBP25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms