RNA–Protein interactions for RNA: ENST00000397661.6

NFIX-203, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 3,143 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-203ENST00000397661 PLEKHG3A1L390 1219 aa26.71■■□□□ 1.87
NFIX-203ENST00000397661 NASPP49321 788 aaPredicted RBP26.71■■□□□ 1.87
NFIX-203ENST00000397661 CCT4P50991 539 aaKnown RBP26.7■■□□□ 1.86
NFIX-203ENST00000397661 LRRCC1Q9C099 1032 aa26.7■■□□□ 1.86
NFIX-203ENST00000397661 USP6P35125 1406 aa26.7■■□□□ 1.86
NFIX-203ENST00000397661 CRB1P82279 1406 aa26.69■■□□□ 1.86
NFIX-203ENST00000397661 IL17REQ8NFR9 667 aa26.68■■□□□ 1.86
NFIX-203ENST00000397661 RRP9O43818 475 aaKnown RBP26.68■■□□□ 1.86
NFIX-203ENST00000397661 MX1P20591 662 aa26.68■■□□□ 1.86
NFIX-203ENST00000397661 SPATA31D1Q6ZQQ2 1576 aa26.67■■□□□ 1.86
NFIX-203ENST00000397661 NRXN3Q9Y4C0 1643 aa26.67■■□□□ 1.86
NFIX-203ENST00000397661 GNAT3A8MTJ3 354 aa26.67■■□□□ 1.86
NFIX-203ENST00000397661 LMOD2Q6P5Q4 547 aa26.67■■□□□ 1.86
NFIX-203ENST00000397661 GDPD2Q9HCC8 539 aa26.67■■□□□ 1.86
NFIX-203ENST00000397661 NUCB2P80303 420 aa26.66■■□□□ 1.86
NFIX-203ENST00000397661 CCDC30Q5VVM6 783 aa26.66■■□□□ 1.86
NFIX-203ENST00000397661 KIAA1211Q6ZU35 1233 aa26.66■■□□□ 1.86
NFIX-203ENST00000397661 NSFL1CQ9UNZ2 370 aaKnown RBP26.66■■□□□ 1.86
NFIX-203ENST00000397661 SURF6O75683 361 aaKnown RBP26.65■■□□□ 1.86
NFIX-203ENST00000397661 KIAA0232Q92628 1395 aa26.65■■□□□ 1.86
NFIX-203ENST00000397661 HDGFL1Q5TGJ6 251 aa26.65■■□□□ 1.86
NFIX-203ENST00000397661 ZDHHC9Q9Y397 364 aa26.65■■□□□ 1.86
NFIX-203ENST00000397661 RIMS1Q86UR5 1692 aaKnown RBP26.65■■□□□ 1.86
NFIX-203ENST00000397661 RNF214Q8ND24 703 aa26.65■■□□□ 1.86
NFIX-203ENST00000397661 TMX3Q96JJ7 454 aa26.65■■□□□ 1.86
NFIX-203ENST00000397661 RBM10P98175 930 aaKnown RBP26.64■■□□□ 1.85
NFIX-203ENST00000397661 XPCQ01831 940 aaPredicted RBP26.64■■□□□ 1.85
NFIX-203ENST00000397661 ANP32BQ92688 251 aaKnown RBP26.64■■□□□ 1.85
NFIX-203ENST00000397661 IL25Q9H293 177 aa26.64■■□□□ 1.85
NFIX-203ENST00000397661 UBTFL1P0CB47 393 aaPredicted RBP26.63■■□□□ 1.85
NFIX-203ENST00000397661 KLHL40Q2TBA0 621 aa26.63■■□□□ 1.85
NFIX-203ENST00000397661 ADAMTS13Q76LX8 1427 aa26.63■■□□□ 1.85
NFIX-203ENST00000397661 LMBRD1Q9NUN5 540 aa26.63■■□□□ 1.85
NFIX-203ENST00000397661 OVOS2A0A0J9YW53 1432 aa26.63■■□□□ 1.85
NFIX-203ENST00000397661 OVOS2Q6IE36 1432 aa26.63■■□□□ 1.85
NFIX-203ENST00000397661 KCNQ3O43525 872 aa26.62■■□□□ 1.85
NFIX-203ENST00000397661 ZSCAN23Q3MJ62 389 aa26.62■■□□□ 1.85
NFIX-203ENST00000397661 SIRT1Q96EB6 747 aa26.62■■□□□ 1.85
NFIX-203ENST00000397661 ESYT1Q9BSJ8 1104 aa26.62■■□□□ 1.85
NFIX-203ENST00000397661 PTPRUQ92729 1446 aa26.61■■□□□ 1.85
NFIX-203ENST00000397661 FLT4P35916 1363 aa26.61■■□□□ 1.85
NFIX-203ENST00000397661 KCNA6P17658 529 aa26.61■■□□□ 1.85
NFIX-203ENST00000397661 PRIM1P49642 420 aaKnown RBP26.61■■□□□ 1.85
NFIX-203ENST00000397661 DDX54Q8TDD1 881 aaKnown RBP26.61■■□□□ 1.85
NFIX-203ENST00000397661 LGR6Q9HBX8 967 aa26.61■■□□□ 1.85
NFIX-203ENST00000397661 SETD1AO15047 1707 aaKnown RBP26.61■■□□□ 1.85
NFIX-203ENST00000397661 HOXC9P31274 260 aa26.61■■□□□ 1.85
NFIX-203ENST00000397661 DIP2BQ9P265 1576 aa26.6■■□□□ 1.85
NFIX-203ENST00000397661 KIF24Q5T7B8 1368 aa26.6■■□□□ 1.85
NFIX-203ENST00000397661 SETD1BQ9UPS6 1966 aaKnown RBP26.6■■□□□ 1.85
NFIX-203ENST00000397661 GPT2Q8TD30 523 aa26.6■■□□□ 1.85
NFIX-203ENST00000397661 USP44Q9H0E7 712 aa26.6■■□□□ 1.85
NFIX-203ENST00000397661 ISY1Q9ULR0 285 aaKnown RBP26.6■■□□□ 1.85
NFIX-203ENST00000397661 GNAI3P08754 354 aa26.6■■□□□ 1.85
NFIX-203ENST00000397661 SYCE3A1L190 88 aa26.59■■□□□ 1.85
NFIX-203ENST00000397661 PPP1R42Q7Z4L9 355 aa26.59■■□□□ 1.85
NFIX-203ENST00000397661 ATP8B2P98198 1209 aa26.58■■□□□ 1.85
NFIX-203ENST00000397661 OS9Q13438 667 aaPredicted RBP26.58■■□□□ 1.85
NFIX-203ENST00000397661 RBSNQ9H1K0 784 aa26.58■■□□□ 1.85
NFIX-203ENST00000397661 CEP170BQ9Y4F5 1589 aaPredicted RBP26.58■■□□□ 1.85
NFIX-203ENST00000397661 SRGAP3O43295 1099 aa26.58■■□□□ 1.85
NFIX-203ENST00000397661 MSNP26038 577 aaKnown RBP26.58■■□□□ 1.85
NFIX-203ENST00000397661 CHMLP26374 656 aa26.58■■□□□ 1.85
NFIX-203ENST00000397661 NBPF7P0C2Y1 421 aaPredicted RBP26.57■■□□□ 1.84
NFIX-203ENST00000397661 TAF7Q15545 349 aaPredicted RBP26.57■■□□□ 1.84
NFIX-203ENST00000397661 LRRC59Q96AG4 307 aaKnown RBP26.56■■□□□ 1.84
NFIX-203ENST00000397661 PEAK1Q9H792 1746 aa26.56■■□□□ 1.84
NFIX-203ENST00000397661 SBNO1A3KN83 1393 aa26.56■■□□□ 1.84
NFIX-203ENST00000397661 CPA1P15085 419 aa26.56■■□□□ 1.84
NFIX-203ENST00000397661 CCDC173Q0VFZ6 552 aa26.56■■□□□ 1.84
NFIX-203ENST00000397661 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.56■■□□□ 1.84
NFIX-203ENST00000397661 MPRIPQ6WCQ1 1025 aa26.55■■□□□ 1.84
NFIX-203ENST00000397661 IGSF1Q8N6C5 1336 aa26.55■■□□□ 1.84
NFIX-203ENST00000397661 CHPF2Q9P2E5 772 aa26.55■■□□□ 1.84
NFIX-203ENST00000397661 C3P01024 1663 aa26.55■■□□□ 1.84
NFIX-203ENST00000397661 AGLP35573 1532 aa26.55■■□□□ 1.84
NFIX-203ENST00000397661 MCCP23508 829 aa26.54■■□□□ 1.84
NFIX-203ENST00000397661 PI4KAP2A4QPH2 592 aa26.54■■□□□ 1.84
NFIX-203ENST00000397661 PI4KAP1Q8N8J0 262 aa26.54■■□□□ 1.84
NFIX-203ENST00000397661 TMEM63CQ9P1W3 806 aa26.54■■□□□ 1.84
NFIX-203ENST00000397661 PTMSP20962 102 aa26.53■■□□□ 1.84
NFIX-203ENST00000397661 ZSCAN30Q86W11 494 aa26.53■■□□□ 1.84
NFIX-203ENST00000397661 CWC22Q9HCG8 908 aaKnown RBP26.53■■□□□ 1.84
NFIX-203ENST00000397661 SPG7Q9UQ90 795 aa26.53■■□□□ 1.84
NFIX-203ENST00000397661 ITSN1Q15811 1721 aa26.53■■□□□ 1.84
NFIX-203ENST00000397661 TECPR2O15040 1411 aa26.53■■□□□ 1.84
NFIX-203ENST00000397661 ARHGEF10O15013 1369 aa26.53■■□□□ 1.84
NFIX-203ENST00000397661 CYP2E1P05181 493 aaPredicted RBP26.53■■□□□ 1.84
NFIX-203ENST00000397661 CWC27Q6UX04 472 aaKnown RBP26.53■■□□□ 1.84
NFIX-203ENST00000397661 R3HCC1Q9Y3T6 440 aaKnown RBP26.53■■□□□ 1.84
NFIX-203ENST00000397661 MON2Q7Z3U7 1717 aa26.53■■□□□ 1.84
NFIX-203ENST00000397661 USP31Q70CQ4 1352 aa26.51■■□□□ 1.83
NFIX-203ENST00000397661 TTC21AQ8NDW8 1320 aa26.5■■□□□ 1.83
NFIX-203ENST00000397661 SRCIN1Q9C0H9 1055 aa26.5■■□□□ 1.83
NFIX-203ENST00000397661 FAM13BQ9NYF5 915 aa26.5■■□□□ 1.83
NFIX-203ENST00000397661 NBPF6Q5VWK0 638 aa26.5■■□□□ 1.83
NFIX-203ENST00000397661 NBPF4Q96M43 638 aa26.5■■□□□ 1.83
NFIX-203ENST00000397661 OSBPL3Q9H4L5 887 aa26.5■■□□□ 1.83
NFIX-203ENST00000397661 AIMP1Q12904 312 aaKnown RBP26.48■■□□□ 1.83
NFIX-203ENST00000397661 SOS1Q07889 1333 aaPredicted RBP26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms