RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 HSP90B1P14625 803 aaKnown RBP6.14□□□□□ -1.43
SSR1-202ENST00000397511 RBM25P49756 843 aaKnown RBP6.14□□□□□ -1.43
SSR1-202ENST00000397511 LMOD3Q0VAK6 560 aa6.14□□□□□ -1.43
SSR1-202ENST00000397511 EDC4Q6P2E9 1401 aaKnown RBP6.13□□□□□ -1.43
SSR1-202ENST00000397511 CDC45O75419 566 aa6.13□□□□□ -1.43
SSR1-202ENST00000397511 SDSP20132 328 aa6.13□□□□□ -1.43
SSR1-202ENST00000397511 MCM5P33992 734 aa6.13□□□□□ -1.43
SSR1-202ENST00000397511 XPCQ01831 940 aaPredicted RBP6.13□□□□□ -1.43
SSR1-202ENST00000397511 ZNF692Q9BU19 519 aaPredicted RBP6.13□□□□□ -1.43
SSR1-202ENST00000397511 MED14O60244 1454 aa6.13□□□□□ -1.43
SSR1-202ENST00000397511 MAP3K19Q56UN5 1328 aa6.13□□□□□ -1.43
SSR1-202ENST00000397511 K7ELQ4 463 aaPredicted RBP6.13□□□□□ -1.43
SSR1-202ENST00000397511 MAP4K4O95819 1239 aaPredicted RBP6.13□□□□□ -1.43
SSR1-202ENST00000397511 NLRP6P59044 892 aa6.13□□□□□ -1.43
SSR1-202ENST00000397511 FKBP5Q13451 457 aaPredicted RBP6.13□□□□□ -1.43
SSR1-202ENST00000397511 CEP85Q6P2H3 762 aa6.13□□□□□ -1.43
SSR1-202ENST00000397511 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.13□□□□□ -1.43
SSR1-202ENST00000397511 RILPL2Q969X0 211 aa6.13□□□□□ -1.43
SSR1-202ENST00000397511 DLG5Q8TDM6 1919 aa6.12□□□□□ -1.43
SSR1-202ENST00000397511 TRIM6-TRIM34B2RNG4 842 aa6.12□□□□□ -1.43
SSR1-202ENST00000397511 GOLGA6L22H0YM25 854 aa6.12□□□□□ -1.43
SSR1-202ENST00000397511 EIF2S2P20042 333 aaKnown RBP6.12□□□□□ -1.43
SSR1-202ENST00000397511 ZGPATQ8N5A5 531 aaKnown RBP6.12□□□□□ -1.43
SSR1-202ENST00000397511 ARHGAP45Q92619 1136 aa6.12□□□□□ -1.43
SSR1-202ENST00000397511 CIZ1Q9ULV3 898 aaPredicted RBP6.12□□□□□ -1.43
SSR1-202ENST00000397511 CPSF1Q10570 1443 aaKnown RBP6.12□□□□□ -1.43
SSR1-202ENST00000397511 SETD1BQ9UPS6 1966 aaKnown RBP6.12□□□□□ -1.43
SSR1-202ENST00000397511 MCTP1Q6DN14 999 aa6.12□□□□□ -1.43
SSR1-202ENST00000397511 PAXIP1Q6ZW49 1069 aaPredicted RBP6.12□□□□□ -1.43
SSR1-202ENST00000397511 DCTPP1Q9H773 170 aa6.12□□□□□ -1.43
SSR1-202ENST00000397511 AMOTL2Q9Y2J4 779 aa6.12□□□□□ -1.43
SSR1-202ENST00000397511 HMGB1P09429 215 aaKnown RBP6.12□□□□□ -1.43
SSR1-202ENST00000397511 TTC22Q5TAA0 569 aa6.12□□□□□ -1.43
SSR1-202ENST00000397511 IL1RAPL2Q9NP60 686 aa6.12□□□□□ -1.43
SSR1-202ENST00000397511 ANKRD26Q9UPS8 1709 aa6.12□□□□□ -1.43
SSR1-202ENST00000397511 IBTKQ9P2D0 1353 aaPredicted RBP6.11□□□□□ -1.43
SSR1-202ENST00000397511 ATP7BP35670 1465 aa6.11□□□□□ -1.43
SSR1-202ENST00000397511 CHL1O00533 1208 aa6.11□□□□□ -1.43
SSR1-202ENST00000397511 ANXA1P04083 346 aa6.11□□□□□ -1.43
SSR1-202ENST00000397511 CBX1P83916 185 aa6.11□□□□□ -1.43
SSR1-202ENST00000397511 LMOD2Q6P5Q4 547 aa6.11□□□□□ -1.43
SSR1-202ENST00000397511 EYA1Q99502 592 aa6.11□□□□□ -1.43
SSR1-202ENST00000397511 LARP6Q9BRS8 491 aaKnown RBP6.11□□□□□ -1.43
SSR1-202ENST00000397511 ZKSCAN5Q9Y2L8 839 aa6.11□□□□□ -1.43
SSR1-202ENST00000397511 DDX49Q9Y6V7 483 aaKnown RBP6.11□□□□□ -1.43
SSR1-202ENST00000397511 PNMA6EA0A0J9YXQ4 647 aa6.11□□□□□ -1.43
SSR1-202ENST00000397511 HDGFP51858 240 aaKnown RBP6.11□□□□□ -1.43
SSR1-202ENST00000397511 PPP4R3CPQ6ZMV5 832 aa6.11□□□□□ -1.43
SSR1-202ENST00000397511 ANKRD44Q8N8A2 993 aa6.11□□□□□ -1.43
SSR1-202ENST00000397511 PTCH1Q13635 1447 aa6.11□□□□□ -1.43
SSR1-202ENST00000397511 VGLL3A8MV65 326 aa6.1□□□□□ -1.43
SSR1-202ENST00000397511 BRPF1P55201 1214 aaPredicted RBP6.1□□□□□ -1.43
SSR1-202ENST00000397511 DNTTIP2Q5QJE6 756 aaKnown RBP6.1□□□□□ -1.43
SSR1-202ENST00000397511 INTS3Q68E01 1043 aaKnown RBP6.1□□□□□ -1.43
SSR1-202ENST00000397511 ABTB2Q8N961 1025 aa6.1□□□□□ -1.43
SSR1-202ENST00000397511 ZNF830Q96NB3 372 aaPredicted RBP6.1□□□□□ -1.43
SSR1-202ENST00000397511 STK31Q9BXU1 1019 aa6.1□□□□□ -1.43
SSR1-202ENST00000397511 PHAXQ9H814 394 aaKnown RBP6.1□□□□□ -1.43
SSR1-202ENST00000397511 RTL1A6NKG5 1358 aa6.1□□□□□ -1.43
SSR1-202ENST00000397511 RIMS1Q86UR5 1692 aaKnown RBP6.1□□□□□ -1.43
SSR1-202ENST00000397511 CDK12Q9NYV4 1490 aaPredicted RBP6.1□□□□□ -1.43
SSR1-202ENST00000397511 RAB3GAP1Q15042 981 aa6.1□□□□□ -1.43
SSR1-202ENST00000397511 CAVIN1Q6NZI2 390 aaKnown RBP6.1□□□□□ -1.43
SSR1-202ENST00000397511 NUTM1Q86Y26 1132 aa6.1□□□□□ -1.43
SSR1-202ENST00000397511 MYRIPQ8NFW9 859 aa6.1□□□□□ -1.43
SSR1-202ENST00000397511 SNX21Q969T3 373 aa6.1□□□□□ -1.43
SSR1-202ENST00000397511 USP26Q9BXU7 913 aa6.1□□□□□ -1.43
SSR1-202ENST00000397511 UPF3BQ9BZI7 483 aaKnown RBP6.1□□□□□ -1.43
SSR1-202ENST00000397511 CCDC39Q9UFE4 941 aa6.1□□□□□ -1.43
SSR1-202ENST00000397511 TNRQ92752 1358 aa6.09□□□□□ -1.43
SSR1-202ENST00000397511 KNDC1Q76NI1 1749 aa6.09□□□□□ -1.43
SSR1-202ENST00000397511 DDIT3P35638 169 aa6.09□□□□□ -1.43
SSR1-202ENST00000397511 NEK4P51957 841 aa6.09□□□□□ -1.43
SSR1-202ENST00000397511 PLCD3Q8N3E9 789 aa6.09□□□□□ -1.43
SSR1-202ENST00000397511 ANO2Q9NQ90 1003 aa6.09□□□□□ -1.43
SSR1-202ENST00000397511 NCOA3Q9Y6Q9 1424 aa6.09□□□□□ -1.43
SSR1-202ENST00000397511 AATKQ6ZMQ8 1374 aa6.09□□□□□ -1.43
SSR1-202ENST00000397511 PRPF40AO75400 957 aaKnown RBP6.09□□□□□ -1.43
SSR1-202ENST00000397511 HMGN5P82970 282 aaKnown RBP6.09□□□□□ -1.43
SSR1-202ENST00000397511 FLIIQ13045 1269 aa6.09□□□□□ -1.43
SSR1-202ENST00000397511 KLHL40Q2TBA0 621 aa6.09□□□□□ -1.43
SSR1-202ENST00000397511 CASC1Q6TDU7 716 aa6.09□□□□□ -1.43
SSR1-202ENST00000397511 RPAP2Q8IXW5 612 aaPredicted RBP6.09□□□□□ -1.43
SSR1-202ENST00000397511 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.09□□□□□ -1.43
SSR1-202ENST00000397511 RBM27Q9P2N5 1060 aaKnown RBP6.09□□□□□ -1.43
SSR1-202ENST00000397511 LRRFIP2Q9Y608 721 aaKnown RBP6.09□□□□□ -1.43
SSR1-202ENST00000397511 EID1Q9Y6B2 187 aa6.09□□□□□ -1.43
SSR1-202ENST00000397511 TMEM2Q9UHN6 1383 aa6.09□□□□□ -1.44
SSR1-202ENST00000397511 BAG4O95429 457 aaKnown RBP6.08□□□□□ -1.44
SSR1-202ENST00000397511 UNC5CLQ8IV45 518 aa6.08□□□□□ -1.44
SSR1-202ENST00000397511 PDLIM2Q96JY6 352 aa6.08□□□□□ -1.44
SSR1-202ENST00000397511 PRIMPOLQ96LW4 560 aa6.08□□□□□ -1.44
SSR1-202ENST00000397511 CGNQ9P2M7 1197 aaKnown RBP6.08□□□□□ -1.44
SSR1-202ENST00000397511 PIK3R4Q99570 1358 aa6.08□□□□□ -1.44
SSR1-202ENST00000397511 ATP10DQ9P241 1426 aa6.08□□□□□ -1.44
SSR1-202ENST00000397511 PDE1AP54750 535 aa6.08□□□□□ -1.44
SSR1-202ENST00000397511 ZNF445P59923 1031 aa6.08□□□□□ -1.44
SSR1-202ENST00000397511 PALD1Q9ULE6 856 aa6.08□□□□□ -1.44
SSR1-202ENST00000397511 RGS12O14924 1447 aa6.08□□□□□ -1.44
SSR1-202ENST00000397511 NRXN3Q9Y4C0 1643 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms