RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 ZNF521Q96K83 1311 aa30.85■■■□□ 2.53
TSPAN4-203ENST00000397397 NFATC2IPQ8NCF5 419 aa30.84■■■□□ 2.53
TSPAN4-203ENST00000397397 TMOD3Q9NYL9 352 aa30.84■■■□□ 2.53
TSPAN4-203ENST00000397397 ZBED9Q6R2W3 1325 aa30.84■■■□□ 2.53
TSPAN4-203ENST00000397397 SIPA1L3O60292 1781 aaPredicted RBP30.84■■■□□ 2.53
TSPAN4-203ENST00000397397 DEFB132Q7Z7B7 95 aa30.82■■■□□ 2.52
TSPAN4-203ENST00000397397 TAF7Q15545 349 aaPredicted RBP30.81■■■□□ 2.52
TSPAN4-203ENST00000397397 LAS1LQ9Y4W2 734 aaKnown RBP30.81■■■□□ 2.52
TSPAN4-203ENST00000397397 NHSQ6T4R5 1651 aa30.81■■■□□ 2.52
TSPAN4-203ENST00000397397 KCNQ2O43526 872 aa30.81■■■□□ 2.52
TSPAN4-203ENST00000397397 SF3B2Q13435 895 aaKnown RBP30.8■■■□□ 2.52
TSPAN4-203ENST00000397397 IL16Q14005 1332 aa30.79■■■□□ 2.52
TSPAN4-203ENST00000397397 PIGBQ92521 554 aa30.79■■■□□ 2.52
TSPAN4-203ENST00000397397 GOLGA2Q08379 1002 aa30.78■■■□□ 2.52
TSPAN4-203ENST00000397397 BTBD11A6QL63 1104 aa30.77■■■□□ 2.52
TSPAN4-203ENST00000397397 IFT57Q9NWB7 429 aa30.77■■■□□ 2.52
TSPAN4-203ENST00000397397 GNAI1P63096 354 aa30.76■■■□□ 2.51
TSPAN4-203ENST00000397397 CFAP44Q96MT7 982 aa30.76■■■□□ 2.51
TSPAN4-203ENST00000397397 MIS18AQ9NYP9 233 aa30.76■■■□□ 2.51
TSPAN4-203ENST00000397397 TNS1Q9HBL0 1735 aaKnown RBP30.76■■■□□ 2.51
TSPAN4-203ENST00000397397 TRIM37O94972 964 aa30.74■■■□□ 2.51
TSPAN4-203ENST00000397397 PTF1AQ7RTS3 328 aa30.74■■■□□ 2.51
TSPAN4-203ENST00000397397 BCL11BQ9C0K0 894 aaPredicted RBP30.74■■■□□ 2.51
TSPAN4-203ENST00000397397 TSPYL4Q9UJ04 414 aa30.74■■■□□ 2.51
TSPAN4-203ENST00000397397 ZNF853P0CG23 659 aa30.73■■■□□ 2.51
TSPAN4-203ENST00000397397 SPINK5Q9NQ38 1064 aaPredicted RBP30.73■■■□□ 2.51
TSPAN4-203ENST00000397397 BTAF1O14981 1849 aa30.73■■■□□ 2.51
TSPAN4-203ENST00000397397 CHL1O00533 1208 aa30.73■■■□□ 2.51
TSPAN4-203ENST00000397397 BABAM1Q9NWV8 329 aa30.73■■■□□ 2.51
TSPAN4-203ENST00000397397 SLC39A6Q13433 755 aa30.72■■■□□ 2.51
TSPAN4-203ENST00000397397 CDCA7LQ96GN5 454 aa30.72■■■□□ 2.51
TSPAN4-203ENST00000397397 KDM3BQ7LBC6 1761 aa30.71■■■□□ 2.51
TSPAN4-203ENST00000397397 PAPPAQ13219 1627 aa30.7■■■□□ 2.51
TSPAN4-203ENST00000397397 E9PSI1 815 aa30.7■■■□□ 2.5
TSPAN4-203ENST00000397397 SLFN5Q08AF3 891 aa30.7■■■□□ 2.5
TSPAN4-203ENST00000397397 MYH16Q9H6N6 1097 aa30.7■■■□□ 2.5
TSPAN4-203ENST00000397397 MBIPQ9NS73 344 aa30.7■■■□□ 2.5
TSPAN4-203ENST00000397397 ASAP1Q9ULH1 1129 aa30.7■■■□□ 2.5
TSPAN4-203ENST00000397397 BAG6P46379 1132 aa30.69■■■□□ 2.5
TSPAN4-203ENST00000397397 TSR2Q969E8 191 aaKnown RBP30.69■■■□□ 2.5
TSPAN4-203ENST00000397397 ATG3Q9NT62 314 aa30.69■■■□□ 2.5
TSPAN4-203ENST00000397397 KCNQ3O43525 872 aa30.68■■■□□ 2.5
TSPAN4-203ENST00000397397 ZNF790Q6PG37 636 aa30.68■■■□□ 2.5
TSPAN4-203ENST00000397397 TTC5Q8N0Z6 440 aa30.68■■■□□ 2.5
TSPAN4-203ENST00000397397 EN1Q05925 392 aaPredicted RBP30.67■■■□□ 2.5
TSPAN4-203ENST00000397397 FANCIQ9NVI1 1328 aa30.65■■■□□ 2.5
TSPAN4-203ENST00000397397 SMARCC1Q92922 1105 aaPredicted RBP30.64■■■□□ 2.5
TSPAN4-203ENST00000397397 UBR2Q8IWV8 1755 aa30.63■■■□□ 2.49
TSPAN4-203ENST00000397397 APBA3O96018 575 aa30.62■■■□□ 2.49
TSPAN4-203ENST00000397397 TRMT2AQ8IZ69 625 aaKnown RBP30.62■■■□□ 2.49
TSPAN4-203ENST00000397397 PALLDQ8WX93 1383 aa30.61■■■□□ 2.49
TSPAN4-203ENST00000397397 PTCD1O75127 700 aaKnown RBP30.61■■■□□ 2.49
TSPAN4-203ENST00000397397 EIF4A1P60842 406 aaKnown RBP30.61■■■□□ 2.49
TSPAN4-203ENST00000397397 KCPQ6ZWJ8 1503 aa30.6■■■□□ 2.49
TSPAN4-203ENST00000397397 EZH2Q15910 746 aaKnown RBP30.6■■■□□ 2.49
TSPAN4-203ENST00000397397 RBM42Q9BTD8 480 aaKnown RBP30.6■■■□□ 2.49
TSPAN4-203ENST00000397397 DUSP27Q5VZP5 1158 aa30.59■■■□□ 2.49
TSPAN4-203ENST00000397397 ZNF496Q96IT1 587 aaPredicted RBP30.59■■■□□ 2.49
TSPAN4-203ENST00000397397 FMNL2Q96PY5 1086 aa30.59■■■□□ 2.49
TSPAN4-203ENST00000397397 CAMKK2Q96RR4 588 aa30.58■■■□□ 2.49
TSPAN4-203ENST00000397397 EXOSC9Q06265 439 aaKnown RBP30.56■■■□□ 2.48
TSPAN4-203ENST00000397397 KRT24Q2M2I5 525 aa30.56■■■□□ 2.48
TSPAN4-203ENST00000397397 LY75O60449 1722 aa30.55■■■□□ 2.48
TSPAN4-203ENST00000397397 HEG1Q9ULI3 1381 aa30.54■■■□□ 2.48
TSPAN4-203ENST00000397397 LOC102724428A0A0B4J2F2 783 aa30.54■■■□□ 2.48
TSPAN4-203ENST00000397397 SIK1P57059 783 aa30.54■■■□□ 2.48
TSPAN4-203ENST00000397397 C8orf58Q8NAV2 365 aa30.54■■■□□ 2.48
TSPAN4-203ENST00000397397 ELL2O00472 640 aaPredicted RBP30.52■■■□□ 2.48
TSPAN4-203ENST00000397397 PLSCR1O15162 318 aa30.52■■■□□ 2.48
TSPAN4-203ENST00000397397 SNRPA1P09661 255 aaKnown RBP30.51■■■□□ 2.47
TSPAN4-203ENST00000397397 VSIG10Q8N0Z9 540 aa30.51■■■□□ 2.47
TSPAN4-203ENST00000397397 SLC4A9Q96Q91 983 aa30.51■■■□□ 2.47
TSPAN4-203ENST00000397397 GIGYF1O75420 1035 aaPredicted RBP30.5■■■□□ 2.47
TSPAN4-203ENST00000397397 ATP6V1AP38606 617 aa30.5■■■□□ 2.47
TSPAN4-203ENST00000397397 TSPYL6Q8N831 410 aa30.5■■■□□ 2.47
TSPAN4-203ENST00000397397 C5P01031 1676 aa30.5■■■□□ 2.47
TSPAN4-203ENST00000397397 CCNL1Q9UK58 526 aaPredicted RBP30.49■■■□□ 2.47
TSPAN4-203ENST00000397397 RREB1Q92766 1687 aa30.49■■■□□ 2.47
TSPAN4-203ENST00000397397 PRAMEF22A3QJZ6 481 aa30.48■■■□□ 2.47
TSPAN4-203ENST00000397397 TWISTNBQ3B726 338 aaPredicted RBP30.48■■■□□ 2.47
TSPAN4-203ENST00000397397 RGPD3A6NKT7 1758 aaPredicted RBP30.48■■■□□ 2.47
TSPAN4-203ENST00000397397 RGPD4Q7Z3J3 1758 aa30.48■■■□□ 2.47
TSPAN4-203ENST00000397397 ZNF831Q5JPB2 1677 aa30.48■■■□□ 2.47
TSPAN4-203ENST00000397397 TJP1Q07157 1748 aa30.47■■■□□ 2.47
TSPAN4-203ENST00000397397 DNAJC10Q8IXB1 793 aa30.47■■■□□ 2.47
TSPAN4-203ENST00000397397 HOXB7P09629 217 aa30.46■■■□□ 2.47
TSPAN4-203ENST00000397397 KCNQ4P56696 695 aa30.46■■■□□ 2.47
TSPAN4-203ENST00000397397 TEX13AQ9BXU3 409 aaPredicted RBP30.46■■■□□ 2.47
TSPAN4-203ENST00000397397 TXNRD1Q16881 649 aa30.45■■■□□ 2.46
TSPAN4-203ENST00000397397 NUP188Q5SRE5 1749 aa30.45■■■□□ 2.46
TSPAN4-203ENST00000397397 LAMB4A4D0S4 1761 aa30.44■■■□□ 2.46
TSPAN4-203ENST00000397397 SOS1Q07889 1333 aaPredicted RBP30.44■■■□□ 2.46
TSPAN4-203ENST00000397397 CICQ96RK0 1608 aaPredicted RBP30.44■■■□□ 2.46
TSPAN4-203ENST00000397397 ITPK1Q13572 414 aa30.44■■■□□ 2.46
TSPAN4-203ENST00000397397 SLC27A3Q5K4L6 730 aa30.44■■■□□ 2.46
TSPAN4-203ENST00000397397 USP16Q9Y5T5 823 aa30.44■■■□□ 2.46
TSPAN4-203ENST00000397397 VAMP4O75379 141 aa30.43■■■□□ 2.46
TSPAN4-203ENST00000397397 EIF2S2P20042 333 aaKnown RBP30.43■■■□□ 2.46
TSPAN4-203ENST00000397397 PSDA5PKW4 1024 aaPredicted RBP30.42■■■□□ 2.46
TSPAN4-203ENST00000397397 PROM2Q8N271 834 aa30.42■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms