RNA–Protein interactions for RNA: ENST00000397172.7

APTX-207, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,740 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-207ENST00000397172 HDGFL2Q7Z4V5 671 aaPredicted RBP12.07□□□□□ -0.48
APTX-207ENST00000397172 WDR63Q8IWG1 891 aa12.07□□□□□ -0.48
APTX-207ENST00000397172 PIBF1Q8WXW3 757 aa12.07□□□□□ -0.48
APTX-207ENST00000397172 DDX17Q92841 729 aaKnown RBP12.07□□□□□ -0.48
APTX-207ENST00000397172 ARID3AQ99856 593 aa12.07□□□□□ -0.48
APTX-207ENST00000397172 TMEM51Q9NW97 253 aa12.07□□□□□ -0.48
APTX-207ENST00000397172 COL16A1Q07092 1604 aaPredicted RBP12.07□□□□□ -0.48
APTX-207ENST00000397172 ZBTB22O15209 634 aa12.06□□□□□ -0.48
APTX-207ENST00000397172 ZKSCAN2Q63HK3 967 aa12.06□□□□□ -0.48
APTX-207ENST00000397172 RBSNQ9H1K0 784 aa12.06□□□□□ -0.48
APTX-207ENST00000397172 OGFRQ9NZT2 677 aa12.06□□□□□ -0.48
APTX-207ENST00000397172 CD163L1Q9NR16 1453 aa12.06□□□□□ -0.48
APTX-207ENST00000397172 USP6P35125 1406 aa12.06□□□□□ -0.48
APTX-207ENST00000397172 ANKRD36BQ8N2N9 1353 aa12.06□□□□□ -0.48
APTX-207ENST00000397172 SYCP1Q15431 976 aa12.06□□□□□ -0.48
APTX-207ENST00000397172 ILDR1Q86SU0 546 aaPredicted RBP12.06□□□□□ -0.48
APTX-207ENST00000397172 ZNF219Q9P2Y4 722 aaPredicted RBP12.06□□□□□ -0.48
APTX-207ENST00000397172 DDX19BQ9UMR2 479 aa12.06□□□□□ -0.48
APTX-207ENST00000397172 SPATA31A3Q5VYP0 1347 aa12.05□□□□□ -0.48
APTX-207ENST00000397172 MCTP1Q6DN14 999 aa12.05□□□□□ -0.48
APTX-207ENST00000397172 SSH2Q76I76 1423 aa12.04□□□□□ -0.48
APTX-207ENST00000397172 JCADQ9P266 1359 aa12.04□□□□□ -0.48
APTX-207ENST00000397172 SSFA2P28290 1259 aa12.04□□□□□ -0.48
APTX-207ENST00000397172 RABEP1Q15276 862 aa12.04□□□□□ -0.48
APTX-207ENST00000397172 TNS3Q68CZ2 1445 aa12.04□□□□□ -0.48
APTX-207ENST00000397172 AKAP12Q02952 1782 aa12.04□□□□□ -0.48
APTX-207ENST00000397172 A0A1W2PP64 1363 aa12.04□□□□□ -0.48
APTX-207ENST00000397172 ARHGEF10O15013 1369 aa12.04□□□□□ -0.48
APTX-207ENST00000397172 BMP2KLQ5H9B9 411 aa12.03□□□□□ -0.48
APTX-207ENST00000397172 AMER1Q5JTC6 1135 aaPredicted RBP12.03□□□□□ -0.48
APTX-207ENST00000397172 DZIP1LQ8IYY4 767 aaKnown RBP12.03□□□□□ -0.48
APTX-207ENST00000397172 TRPM3Q9HCF6 1732 aaPredicted RBP12.03□□□□□ -0.48
APTX-207ENST00000397172 TTC21AQ8NDW8 1320 aa12.03□□□□□ -0.48
APTX-207ENST00000397172 PRIM1P49642 420 aaKnown RBP12.03□□□□□ -0.48
APTX-207ENST00000397172 NOLC1Q14978 699 aaKnown RBP eCLIP12.03□□□□□ -0.48
APTX-207ENST00000397172 WWC1Q8IX03 1113 aa12.03□□□□□ -0.48
APTX-207ENST00000397172 CCDC146Q8IYE0 955 aa12.03□□□□□ -0.48
APTX-207ENST00000397172 TSPY26PQ9H489 355 aa12.03□□□□□ -0.48
APTX-207ENST00000397172 LMBRD1Q9NUN5 540 aa12.03□□□□□ -0.48
APTX-207ENST00000397172 CALCOCO1Q9P1Z2 691 aa12.03□□□□□ -0.48
APTX-207ENST00000397172 MYOM1P52179 1685 aa12.02□□□□□ -0.48
APTX-207ENST00000397172 EDC4Q6P2E9 1401 aaKnown RBP12.02□□□□□ -0.48
APTX-207ENST00000397172 MON2Q7Z3U7 1717 aa12.02□□□□□ -0.49
APTX-207ENST00000397172 PNPLA6Q8IY17 1366 aa12.01□□□□□ -0.49
APTX-207ENST00000397172 TTC21BQ7Z4L5 1316 aa12.01□□□□□ -0.49
APTX-207ENST00000397172 CCDC27Q2M243 656 aa12.01□□□□□ -0.49
APTX-207ENST00000397172 TIGD1Q96MW7 591 aa12.01□□□□□ -0.49
APTX-207ENST00000397172 CGNQ9P2M7 1197 aaKnown RBP12.01□□□□□ -0.49
APTX-207ENST00000397172 SHPRHQ149N8 1683 aa12.01□□□□□ -0.49
APTX-207ENST00000397172 SPATA31A6Q5VVP1 1343 aa12.01□□□□□ -0.49
APTX-207ENST00000397172 GOLGA6L6A8MZA4 724 aa12□□□□□ -0.49
APTX-207ENST00000397172 FKBP5Q13451 457 aaPredicted RBP12□□□□□ -0.49
APTX-207ENST00000397172 SPTLC3Q9NUV7 552 aa12□□□□□ -0.49
APTX-207ENST00000397172 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12□□□□□ -0.49
APTX-207ENST00000397172 ALS2Q96Q42 1657 aa12□□□□□ -0.49
APTX-207ENST00000397172 COL22A1Q8NFW1 1626 aaPredicted RBP12□□□□□ -0.49
APTX-207ENST00000397172 NRKQ7Z2Y5 1582 aa12□□□□□ -0.49
APTX-207ENST00000397172 ZNF710Q8N1W2 664 aa12□□□□□ -0.49
APTX-207ENST00000397172 RUNDC1Q96C34 613 aa12□□□□□ -0.49
APTX-207ENST00000397172 IPO8O15397 1037 aaKnown RBP11.99□□□□□ -0.49
APTX-207ENST00000397172 ST18O60284 1047 aa11.99□□□□□ -0.49
APTX-207ENST00000397172 ABTB2Q8N961 1025 aa11.99□□□□□ -0.49
APTX-207ENST00000397172 ANKRD7Q92527 254 aa11.99□□□□□ -0.49
APTX-207ENST00000397172 NUCB1Q02818 461 aa11.98□□□□□ -0.49
APTX-207ENST00000397172 ATP2B3Q16720 1220 aa11.98□□□□□ -0.49
APTX-207ENST00000397172 GCC1Q96CN9 775 aa11.98□□□□□ -0.49
APTX-207ENST00000397172 BCL2L12Q9HB09 334 aa11.98□□□□□ -0.49
APTX-207ENST00000397172 PRPF40AO75400 957 aaKnown RBP11.97□□□□□ -0.49
APTX-207ENST00000397172 CYP2E1P05181 493 aaPredicted RBP11.97□□□□□ -0.49
APTX-207ENST00000397172 LMOD2Q6P5Q4 547 aa11.97□□□□□ -0.49
APTX-207ENST00000397172 CARD14Q9BXL6 1004 aa11.97□□□□□ -0.49
APTX-207ENST00000397172 USP31Q70CQ4 1352 aa11.97□□□□□ -0.49
APTX-207ENST00000397172 MED1Q15648 1581 aaPredicted RBP11.97□□□□□ -0.49
APTX-207ENST00000397172 IRX3P78415 501 aaPredicted RBP11.97□□□□□ -0.49
APTX-207ENST00000397172 NSD3Q9BZ95 1437 aa11.96□□□□□ -0.49
APTX-207ENST00000397172 CDC45O75419 566 aa11.96□□□□□ -0.49
APTX-207ENST00000397172 NLRP6P59044 892 aa11.96□□□□□ -0.49
APTX-207ENST00000397172 CASC1Q6TDU7 716 aa11.96□□□□□ -0.49
APTX-207ENST00000397172 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.96□□□□□ -0.492e-6■■■□□ 17.9
APTX-207ENST00000397172 GAS2L2Q8NHY3 880 aa11.96□□□□□ -0.49
APTX-207ENST00000397172 SYCE3A1L190 88 aa11.95□□□□□ -0.5
APTX-207ENST00000397172 CTIFO43310 598 aaKnown RBP11.95□□□□□ -0.5
APTX-207ENST00000397172 RLBP1P12271 317 aa11.95□□□□□ -0.5
APTX-207ENST00000397172 CHD1LQ86WJ1 897 aa11.95□□□□□ -0.5
APTX-207ENST00000397172 PIK3C2AO00443 1686 aa11.95□□□□□ -0.5
APTX-207ENST00000397172 USP54Q70EL1 1684 aa11.94□□□□□ -0.5
APTX-207ENST00000397172 FYB1O15117 783 aa11.94□□□□□ -0.5
APTX-207ENST00000397172 MCM2P49736 904 aa11.94□□□□□ -0.5
APTX-207ENST00000397172 NSD2O96028 1365 aa11.94□□□□□ -0.5
APTX-207ENST00000397172 KCNJ4P48050 445 aa11.94□□□□□ -0.5
APTX-207ENST00000397172 NME9Q86XW9 330 aa11.94□□□□□ -0.5
APTX-207ENST00000397172 ITPRIPQ8IWB1 547 aa11.94□□□□□ -0.5
APTX-207ENST00000397172 KCNH5Q8NCM2 988 aa11.94□□□□□ -0.5
APTX-207ENST00000397172 KIF2CQ99661 725 aa11.94□□□□□ -0.5
APTX-207ENST00000397172 OVOS2A0A0J9YW53 1432 aa11.93□□□□□ -0.5
APTX-207ENST00000397172 OVOS2Q6IE36 1432 aa11.93□□□□□ -0.5
APTX-207ENST00000397172 SPDYE4A6NLX3 237 aa11.93□□□□□ -0.5
APTX-207ENST00000397172 COG3Q96JB2 828 aa11.93□□□□□ -0.5
APTX-207ENST00000397172 CFAP53Q96M91 514 aa11.93□□□□□ -0.5
APTX-207ENST00000397172 IRX5P78411 483 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms