RNA–Protein interactions for RNA: ENST00000397011.2

EIF3B-202, Transcript of eukaryotic translation initiation factor 3 subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3B, Length 2,966 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3B-202ENST00000397011 ESPNB1AK53 854 aa23.39■■□□□ 1.34
EIF3B-202ENST00000397011 EID1Q9Y6B2 187 aa23.39■■□□□ 1.33
EIF3B-202ENST00000397011 LRRCC1Q9C099 1032 aa23.38■■□□□ 1.33
EIF3B-202ENST00000397011 SKOR2Q2VWA4 1001 aaPredicted RBP23.38■■□□□ 1.33
EIF3B-202ENST00000397011 IL25Q9H293 177 aa23.38■■□□□ 1.33
EIF3B-202ENST00000397011 NSFL1CQ9UNZ2 370 aaKnown RBP23.38■■□□□ 1.33
EIF3B-202ENST00000397011 CCT4P50991 539 aaKnown RBP23.37■■□□□ 1.33
EIF3B-202ENST00000397011 IL17REQ8NFR9 667 aa23.37■■□□□ 1.33
EIF3B-202ENST00000397011 PTPRUQ92729 1446 aa23.37■■□□□ 1.33
EIF3B-202ENST00000397011 PEAK1Q9H792 1746 aa23.37■■□□□ 1.33
EIF3B-202ENST00000397011 KIAA0232Q92628 1395 aa23.37■■□□□ 1.33
EIF3B-202ENST00000397011 MX1P20591 662 aa23.37■■□□□ 1.33
EIF3B-202ENST00000397011 C3P01024 1663 aa23.37■■□□□ 1.33
EIF3B-202ENST00000397011 GDPD2Q9HCC8 539 aa23.37■■□□□ 1.33
EIF3B-202ENST00000397011 ZDHHC9Q9Y397 364 aa23.37■■□□□ 1.33
EIF3B-202ENST00000397011 CEP170BQ9Y4F5 1589 aaPredicted RBP23.36■■□□□ 1.33
EIF3B-202ENST00000397011 GNAT3A8MTJ3 354 aa23.36■■□□□ 1.33
EIF3B-202ENST00000397011 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.36■■□□□ 1.33
EIF3B-202ENST00000397011 MON2Q7Z3U7 1717 aa23.35■■□□□ 1.33
EIF3B-202ENST00000397011 ITSN1Q15811 1721 aa23.35■■□□□ 1.33
EIF3B-202ENST00000397011 HDGFL1Q5TGJ6 251 aa23.34■■□□□ 1.33
EIF3B-202ENST00000397011 RNF214Q8ND24 703 aa23.34■■□□□ 1.33
EIF3B-202ENST00000397011 TMX3Q96JJ7 454 aa23.34■■□□□ 1.33
EIF3B-202ENST00000397011 FLT4P35916 1363 aa23.34■■□□□ 1.33
EIF3B-202ENST00000397011 SETD1BQ9UPS6 1966 aaKnown RBP23.34■■□□□ 1.33
EIF3B-202ENST00000397011 XPCQ01831 940 aaPredicted RBP23.34■■□□□ 1.33
EIF3B-202ENST00000397011 KLHL40Q2TBA0 621 aa23.34■■□□□ 1.33
EIF3B-202ENST00000397011 LMBRD1Q9NUN5 540 aa23.34■■□□□ 1.33
EIF3B-202ENST00000397011 NUCB2P80303 420 aa23.34■■□□□ 1.33
EIF3B-202ENST00000397011 CCDC30Q5VVM6 783 aa23.34■■□□□ 1.33
EIF3B-202ENST00000397011 ZSCAN23Q3MJ62 389 aa23.33■■□□□ 1.33
EIF3B-202ENST00000397011 LMOD2Q6P5Q4 547 aa23.33■■□□□ 1.33
EIF3B-202ENST00000397011 SURF6O75683 361 aaKnown RBP23.33■■□□□ 1.32
EIF3B-202ENST00000397011 AGLP35573 1532 aa23.33■■□□□ 1.32
EIF3B-202ENST00000397011 KCNQ3O43525 872 aa23.32■■□□□ 1.32
EIF3B-202ENST00000397011 KCNA6P17658 529 aa23.32■■□□□ 1.32
EIF3B-202ENST00000397011 CLCN1P35523 988 aa23.32■■□□□ 1.32
EIF3B-202ENST00000397011 GPT2Q8TD30 523 aa23.32■■□□□ 1.32
EIF3B-202ENST00000397011 UBTFL1P0CB47 393 aaPredicted RBP23.32■■□□□ 1.32
EIF3B-202ENST00000397011 ESYT1Q9BSJ8 1104 aa23.32■■□□□ 1.32
EIF3B-202ENST00000397011 TECPR2O15040 1411 aa23.32■■□□□ 1.32
EIF3B-202ENST00000397011 KIF24Q5T7B8 1368 aa23.32■■□□□ 1.32
EIF3B-202ENST00000397011 HOXC9P31274 260 aa23.31■■□□□ 1.32
EIF3B-202ENST00000397011 PRIM1P49642 420 aaKnown RBP23.31■■□□□ 1.32
EIF3B-202ENST00000397011 MPNDQ8N594 471 aa23.31■■□□□ 1.32
EIF3B-202ENST00000397011 DDX54Q8TDD1 881 aaKnown RBP23.31■■□□□ 1.32
EIF3B-202ENST00000397011 SIRT1Q96EB6 747 aa23.31■■□□□ 1.32
EIF3B-202ENST00000397011 USP44Q9H0E7 712 aa23.31■■□□□ 1.32
EIF3B-202ENST00000397011 LGR6Q9HBX8 967 aa23.31■■□□□ 1.32
EIF3B-202ENST00000397011 SYCE3A1L190 88 aa23.31■■□□□ 1.32
EIF3B-202ENST00000397011 NBPF7P0C2Y1 421 aaPredicted RBP23.29■■□□□ 1.32
EIF3B-202ENST00000397011 IGSF1Q8N6C5 1336 aa23.29■■□□□ 1.32
EIF3B-202ENST00000397011 SBNO1A3KN83 1393 aa23.29■■□□□ 1.32
EIF3B-202ENST00000397011 ANP32BQ92688 251 aaKnown RBP23.29■■□□□ 1.32
EIF3B-202ENST00000397011 RBSNQ9H1K0 784 aa23.29■■□□□ 1.32
EIF3B-202ENST00000397011 CHMLP26374 656 aa23.28■■□□□ 1.32
EIF3B-202ENST00000397011 PPP1R42Q7Z4L9 355 aa23.28■■□□□ 1.32
EIF3B-202ENST00000397011 LRRC59Q96AG4 307 aaKnown RBP23.28■■□□□ 1.32
EIF3B-202ENST00000397011 GNAI3P08754 354 aa23.28■■□□□ 1.32
EIF3B-202ENST00000397011 ARHGEF10O15013 1369 aa23.28■■□□□ 1.32
EIF3B-202ENST00000397011 SRGAP3O43295 1099 aa23.28■■□□□ 1.32
EIF3B-202ENST00000397011 CYP2E1P05181 493 aaPredicted RBP23.27■■□□□ 1.32
EIF3B-202ENST00000397011 CPA1P15085 419 aa23.27■■□□□ 1.32
EIF3B-202ENST00000397011 ATP8B2P98198 1209 aa23.27■■□□□ 1.32
EIF3B-202ENST00000397011 AKAP12Q02952 1782 aa23.27■■□□□ 1.32
EIF3B-202ENST00000397011 USP31Q70CQ4 1352 aa23.26■■□□□ 1.31
EIF3B-202ENST00000397011 CHPF2Q9P2E5 772 aa23.26■■□□□ 1.31
EIF3B-202ENST00000397011 TAF7Q15545 349 aaPredicted RBP23.26■■□□□ 1.31
EIF3B-202ENST00000397011 MPRIPQ6WCQ1 1025 aa23.26■■□□□ 1.31
EIF3B-202ENST00000397011 TMEM63CQ9P1W3 806 aa23.26■■□□□ 1.31
EIF3B-202ENST00000397011 OS9Q13438 667 aaPredicted RBP23.25■■□□□ 1.31
EIF3B-202ENST00000397011 SPG7Q9UQ90 795 aa23.25■■□□□ 1.31
EIF3B-202ENST00000397011 PI4KAP2A4QPH2 592 aa23.25■■□□□ 1.31
EIF3B-202ENST00000397011 PI4KAP1Q8N8J0 262 aa23.25■■□□□ 1.31
EIF3B-202ENST00000397011 CWC27Q6UX04 472 aaKnown RBP23.23■■□□□ 1.31
EIF3B-202ENST00000397011 TTC21AQ8NDW8 1320 aa23.23■■□□□ 1.31
EIF3B-202ENST00000397011 NRKQ7Z2Y5 1582 aa23.22■■□□□ 1.31
EIF3B-202ENST00000397011 PLEKHG1Q9ULL1 1385 aa23.22■■□□□ 1.31
EIF3B-202ENST00000397011 MCCP23508 829 aa23.22■■□□□ 1.31
EIF3B-202ENST00000397011 NBPF6Q5VWK0 638 aa23.22■■□□□ 1.31
EIF3B-202ENST00000397011 NBPF4Q96M43 638 aa23.22■■□□□ 1.31
EIF3B-202ENST00000397011 SOS1Q07889 1333 aaPredicted RBP23.22■■□□□ 1.31
EIF3B-202ENST00000397011 OSBPL3Q9H4L5 887 aa23.22■■□□□ 1.31
EIF3B-202ENST00000397011 CWC22Q9HCG8 908 aaKnown RBP23.22■■□□□ 1.31
EIF3B-202ENST00000397011 PRAMEF22A3QJZ6 481 aa23.21■■□□□ 1.31
EIF3B-202ENST00000397011 PTMSP20962 102 aa23.21■■□□□ 1.31
EIF3B-202ENST00000397011 IBTKQ9P2D0 1353 aaPredicted RBP23.21■■□□□ 1.31
EIF3B-202ENST00000397011 RGPD8O14715 1765 aaPredicted RBP23.21■■□□□ 1.31
EIF3B-202ENST00000397011 SRCIN1Q9C0H9 1055 aa23.2■■□□□ 1.3
EIF3B-202ENST00000397011 ISY1Q9ULR0 285 aaKnown RBP23.2■■□□□ 1.3
EIF3B-202ENST00000397011 SALL3Q9BXA9 1300 aa23.2■■□□□ 1.3
EIF3B-202ENST00000397011 KDRP35968 1356 aa23.2■■□□□ 1.3
EIF3B-202ENST00000397011 PA2G4Q9UQ80 394 aaKnown RBP23.2■■□□□ 1.3
EIF3B-202ENST00000397011 MAP3K5Q99683 1374 aa23.2■■□□□ 1.3
EIF3B-202ENST00000397011 GADD45BO75293 160 aaPredicted RBP23.19■■□□□ 1.3
EIF3B-202ENST00000397011 SSH2Q76I76 1423 aa23.19■■□□□ 1.3
EIF3B-202ENST00000397011 CCDC173Q0VFZ6 552 aa23.18■■□□□ 1.3
EIF3B-202ENST00000397011 AIMP1Q12904 312 aaKnown RBP23.18■■□□□ 1.3
EIF3B-202ENST00000397011 CLEC17AQ6ZS10 378 aa23.18■■□□□ 1.3
EIF3B-202ENST00000397011 ESCO1Q5FWF5 840 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms