RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 NBPF4Q96M43 638 aa14.18□□□□□ -0.14
PDXDC1-202ENST00000396410 NCLP19338 710 aaKnown RBP14.18□□□□□ -0.14
PDXDC1-202ENST00000396410 ZC3H6P61129 1189 aaKnown RBP14.18□□□□□ -0.14
PDXDC1-202ENST00000396410 RAPGEF4Q8WZA2 1011 aa14.18□□□□□ -0.14
PDXDC1-202ENST00000396410 ORAI2Q96SN7 254 aa14.18□□□□□ -0.14
PDXDC1-202ENST00000396410 ERC2O15083 957 aa14.18□□□□□ -0.14
PDXDC1-202ENST00000396410 GSPT1P15170 499 aaKnown RBP14.18□□□□□ -0.14
PDXDC1-202ENST00000396410 AMOTQ4VCS5 1084 aa14.18□□□□□ -0.14
PDXDC1-202ENST00000396410 SNX21Q969T3 373 aa14.18□□□□□ -0.14
PDXDC1-202ENST00000396410 RBM42Q9BTD8 480 aaKnown RBP14.17□□□□□ -0.14
PDXDC1-202ENST00000396410 GCP02774 474 aa14.17□□□□□ -0.14
PDXDC1-202ENST00000396410 KRT28Q7Z3Y7 464 aa14.17□□□□□ -0.14
PDXDC1-202ENST00000396410 ANO2Q9NQ90 1003 aa14.17□□□□□ -0.14
PDXDC1-202ENST00000396410 TRAK2O60296 914 aa14.16□□□□□ -0.14
PDXDC1-202ENST00000396410 ANKRD24Q8TF21 1146 aa14.16□□□□□ -0.14
PDXDC1-202ENST00000396410 HDAC5Q9UQL6 1122 aa14.16□□□□□ -0.14
PDXDC1-202ENST00000396410 MX1P20591 662 aa14.16□□□□□ -0.14
PDXDC1-202ENST00000396410 IL1RAPL2Q9NP60 686 aa14.16□□□□□ -0.14
PDXDC1-202ENST00000396410 KDRP35968 1356 aa14.16□□□□□ -0.14
PDXDC1-202ENST00000396410 TSHZ3Q63HK5 1081 aa14.16□□□□□ -0.14
PDXDC1-202ENST00000396410 PHAXQ9H814 394 aaKnown RBP14.16□□□□□ -0.14
PDXDC1-202ENST00000396410 BABAM1Q9NWV8 329 aa14.16□□□□□ -0.14
PDXDC1-202ENST00000396410 BRPF3Q9ULD4 1205 aa14.16□□□□□ -0.14
PDXDC1-202ENST00000396410 PTMSP20962 102 aa14.16□□□□□ -0.14
PDXDC1-202ENST00000396410 LGR6Q9HBX8 967 aa14.16□□□□□ -0.14
PDXDC1-202ENST00000396410 SSH2Q76I76 1423 aa14.15□□□□□ -0.14
PDXDC1-202ENST00000396410 SRGAP3O43295 1099 aa14.15□□□□□ -0.14
PDXDC1-202ENST00000396410 ANTXR1Q9H6X2 564 aa14.15□□□□□ -0.14
PDXDC1-202ENST00000396410 SOS1Q07889 1333 aaPredicted RBP14.15□□□□□ -0.14
PDXDC1-202ENST00000396410 AIMP1Q12904 312 aaKnown RBP14.15□□□□□ -0.14
PDXDC1-202ENST00000396410 AKAP4Q5JQC9 854 aa14.15□□□□□ -0.14
PDXDC1-202ENST00000396410 PDE1AP54750 535 aa14.15□□□□□ -0.14
PDXDC1-202ENST00000396410 ATP8B2P98198 1209 aa14.15□□□□□ -0.14
PDXDC1-202ENST00000396410 NOL8Q76FK4 1167 aaKnown RBP14.15□□□□□ -0.14
PDXDC1-202ENST00000396410 CHPF2Q9P2E5 772 aa14.15□□□□□ -0.14
PDXDC1-202ENST00000396410 CIZ1Q9ULV3 898 aaPredicted RBP14.15□□□□□ -0.14
PDXDC1-202ENST00000396410 DLG5Q8TDM6 1919 aa14.15□□□□□ -0.14
PDXDC1-202ENST00000396410 VIRMAQ69YN4 1812 aaKnown RBP14.15□□□□□ -0.14
PDXDC1-202ENST00000396410 ANXA1P04083 346 aa14.14□□□□□ -0.15
PDXDC1-202ENST00000396410 IL27Q8NEV9 243 aa14.14□□□□□ -0.15
PDXDC1-202ENST00000396410 DNAAF4Q8WXU2 420 aa14.14□□□□□ -0.15
PDXDC1-202ENST00000396410 KIAA1211Q6ZU35 1233 aa14.14□□□□□ -0.15
PDXDC1-202ENST00000396410 CEP170BQ9Y4F5 1589 aaPredicted RBP14.14□□□□□ -0.15
PDXDC1-202ENST00000396410 PI4KAP2A4QPH2 592 aa14.13□□□□□ -0.15
PDXDC1-202ENST00000396410 DDX58O95786 925 aaKnown RBP14.13□□□□□ -0.15
PDXDC1-202ENST00000396410 PI4KAP1Q8N8J0 262 aa14.13□□□□□ -0.15
PDXDC1-202ENST00000396410 HSP90AB4PQ58FF6 505 aa14.13□□□□□ -0.15
PDXDC1-202ENST00000396410 NRKQ7Z2Y5 1582 aa14.13□□□□□ -0.15
PDXDC1-202ENST00000396410 NUTM1Q86Y26 1132 aa14.13□□□□□ -0.15
PDXDC1-202ENST00000396410 ANP32BQ92688 251 aaKnown RBP14.13□□□□□ -0.15
PDXDC1-202ENST00000396410 GPATCH3Q96I76 525 aa14.12□□□□□ -0.15
PDXDC1-202ENST00000396410 PNMA6EA0A0J9YXQ4 647 aa14.12□□□□□ -0.15
PDXDC1-202ENST00000396410 PPP1R42Q7Z4L9 355 aa14.12□□□□□ -0.15
PDXDC1-202ENST00000396410 DBF4Q9UBU7 674 aaPredicted RBP14.12□□□□□ -0.15
PDXDC1-202ENST00000396410 TNPO1Q92973 898 aaKnown RBP14.11□□□□□ -0.15
PDXDC1-202ENST00000396410 TATP17735 454 aaPredicted RBP14.11□□□□□ -0.15
PDXDC1-202ENST00000396410 NEK4P51957 841 aa14.11□□□□□ -0.15
PDXDC1-202ENST00000396410 TTC5Q8N0Z6 440 aa14.11□□□□□ -0.15
PDXDC1-202ENST00000396410 MAP4K4O95819 1239 aaPredicted RBP14.11□□□□□ -0.15
PDXDC1-202ENST00000396410 SKOR2Q2VWA4 1001 aaPredicted RBP14.11□□□□□ -0.15
PDXDC1-202ENST00000396410 USP26Q9BXU7 913 aa14.11□□□□□ -0.15
PDXDC1-202ENST00000396410 PEAK1Q9H792 1746 aa14.11□□□□□ -0.15
PDXDC1-202ENST00000396410 RIC3Q7Z5B4 369 aa14.11□□□□□ -0.15
PDXDC1-202ENST00000396410 EIF4A1P60842 406 aaKnown RBP14.1□□□□□ -0.15
PDXDC1-202ENST00000396410 NUCB2P80303 420 aa14.1□□□□□ -0.15
PDXDC1-202ENST00000396410 NEXNQ0ZGT2 675 aa14.1□□□□□ -0.15
PDXDC1-202ENST00000396410 TOPAZ1Q8N9V7 1692 aa14.1□□□□□ -0.15
PDXDC1-202ENST00000396410 NPHP4O75161 1426 aaPredicted RBP14.1□□□□□ -0.15
PDXDC1-202ENST00000396410 RAB11FIP3O75154 756 aa14.1□□□□□ -0.15
PDXDC1-202ENST00000396410 RNMTO43148 476 aaKnown RBP14.09□□□□□ -0.15
PDXDC1-202ENST00000396410 IFIT2P09913 472 aaKnown RBP14.09□□□□□ -0.15
PDXDC1-202ENST00000396410 KCNQ3O43525 872 aa14.09□□□□□ -0.15
PDXDC1-202ENST00000396410 KCNJ4P48050 445 aa14.09□□□□□ -0.15
PDXDC1-202ENST00000396410 SETD1BQ9UPS6 1966 aaKnown RBP14.09□□□□□ -0.15
PDXDC1-202ENST00000396410 FOXD4L5Q5VV16 416 aaPredicted RBP14.09□□□□□ -0.15
PDXDC1-202ENST00000396410 FOXD4L4Q8WXT5 416 aaPredicted RBP14.09□□□□□ -0.15
PDXDC1-202ENST00000396410 C19orf44Q9H6X5 657 aa14.09□□□□□ -0.15
PDXDC1-202ENST00000396410 ATP10DQ9P241 1426 aa14.09□□□□□ -0.15
PDXDC1-202ENST00000396410 CLASRPQ8N2M8 674 aaKnown RBP14.09□□□□□ -0.15
PDXDC1-202ENST00000396410 KIF1BPQ96EK5 621 aa14.09□□□□□ -0.15
PDXDC1-202ENST00000396410 DDX49Q9Y6V7 483 aaKnown RBP14.09□□□□□ -0.15
PDXDC1-202ENST00000396410 USP44Q9H0E7 712 aa14.08□□□□□ -0.16
PDXDC1-202ENST00000396410 ADGRL3Q9HAR2 1447 aa14.08□□□□□ -0.16
PDXDC1-202ENST00000396410 SPG7Q9UQ90 795 aa14.08□□□□□ -0.16
PDXDC1-202ENST00000396410 MAP3K2Q9Y2U5 619 aa14.08□□□□□ -0.16
PDXDC1-202ENST00000396410 CNTROBQ8N137 903 aa14.08□□□□□ -0.16
PDXDC1-202ENST00000396410 DIAPH3Q9NSV4 1193 aa14.08□□□□□ -0.16
PDXDC1-202ENST00000396410 RGS12O14924 1447 aa14.08□□□□□ -0.16
PDXDC1-202ENST00000396410 MYL6BP14649 208 aa14.07□□□□□ -0.16
PDXDC1-202ENST00000396410 RIMS1Q86UR5 1692 aaKnown RBP14.07□□□□□ -0.16
PDXDC1-202ENST00000396410 HOXB7P09629 217 aa14.07□□□□□ -0.16
PDXDC1-202ENST00000396410 G3BP1Q13283 466 aaKnown RBP eCLIP14.07□□□□□ -0.161e-7■■□□□ 13.3
PDXDC1-202ENST00000396410 RGPD8O14715 1765 aaPredicted RBP14.07□□□□□ -0.16
PDXDC1-202ENST00000396410 SSFA2P28290 1259 aa14.07□□□□□ -0.16
PDXDC1-202ENST00000396410 MCTP1Q6DN14 999 aa14.07□□□□□ -0.16
PDXDC1-202ENST00000396410 ARHGEF25Q86VW2 580 aa14.07□□□□□ -0.16
PDXDC1-202ENST00000396410 RHPN1Q8TCX5 695 aa14.07□□□□□ -0.16
PDXDC1-202ENST00000396410 CD2BP2O95400 341 aaKnown RBP14.06□□□□□ -0.16
PDXDC1-202ENST00000396410 TRIM44Q96DX7 344 aaPredicted RBP14.05□□□□□ -0.16
PDXDC1-202ENST00000396410 HYPKQ9NX55 129 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms