RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 BRWD3Q6RI45 1802 aa24.84■■□□□ 1.57
LMNB1-202ENST00000395354 DCTN1Q14203 1278 aa24.84■■□□□ 1.57
LMNB1-202ENST00000395354 FAM182BQ5T319 152 aa24.84■■□□□ 1.57
LMNB1-202ENST00000395354 MCM10Q7L590 875 aa24.84■■□□□ 1.57
LMNB1-202ENST00000395354 IL17REQ8NFR9 667 aa24.84■■□□□ 1.57
LMNB1-202ENST00000395354 IFT57Q9NWB7 429 aa24.84■■□□□ 1.57
LMNB1-202ENST00000395354 RNMTO43148 476 aaKnown RBP24.83■■□□□ 1.57
LMNB1-202ENST00000395354 GNAI1P63096 354 aa24.83■■□□□ 1.57
LMNB1-202ENST00000395354 PDE3AQ14432 1141 aa24.83■■□□□ 1.57
LMNB1-202ENST00000395354 CRBNQ96SW2 442 aa24.83■■□□□ 1.57
LMNB1-202ENST00000395354 TSR2Q969E8 191 aaKnown RBP24.82■■□□□ 1.56
LMNB1-202ENST00000395354 ZNF853P0CG23 659 aa24.8■■□□□ 1.56
LMNB1-202ENST00000395354 EXOSC9Q06265 439 aaKnown RBP24.8■■□□□ 1.56
LMNB1-202ENST00000395354 THUMPD2Q9BTF0 503 aaKnown RBP24.8■■□□□ 1.56
LMNB1-202ENST00000395354 KAT6BQ8WYB5 2073 aa24.8■■□□□ 1.56
LMNB1-202ENST00000395354 C20orf194Q5TEA3 1177 aa24.8■■□□□ 1.56
LMNB1-202ENST00000395354 ZNF428Q96B54 188 aa24.8■■□□□ 1.56
LMNB1-202ENST00000395354 KDM6AO15550 1401 aaPredicted RBP24.79■■□□□ 1.56
LMNB1-202ENST00000395354 ERVV-2B6SEH9 535 aa24.77■■□□□ 1.56
LMNB1-202ENST00000395354 CEMIPQ8WUJ3 1361 aa24.77■■□□□ 1.56
LMNB1-202ENST00000395354 CFAP44Q96MT7 982 aa24.77■■□□□ 1.56
LMNB1-202ENST00000395354 FAM196AQ6ZSG2 479 aa24.76■■□□□ 1.55
LMNB1-202ENST00000395354 TEFQ10587 303 aa24.76■■□□□ 1.55
LMNB1-202ENST00000395354 ACSBG1Q96GR2 724 aa24.76■■□□□ 1.55
LMNB1-202ENST00000395354 SCN11AQ9UI33 1791 aa24.75■■□□□ 1.55
LMNB1-202ENST00000395354 PRIM1P49642 420 aaKnown RBP24.75■■□□□ 1.55
LMNB1-202ENST00000395354 CABP4P57796 275 aa24.75■■□□□ 1.55
LMNB1-202ENST00000395354 NFATC2IPQ8NCF5 419 aa24.75■■□□□ 1.55
LMNB1-202ENST00000395354 CANXP27824 592 aaKnown RBP24.74■■□□□ 1.55
LMNB1-202ENST00000395354 SLC52A2Q9HAB3 445 aa24.74■■□□□ 1.55
LMNB1-202ENST00000395354 BCL9O00512 1426 aa24.74■■□□□ 1.55
LMNB1-202ENST00000395354 ADAMTS7Q9UKP4 1686 aa24.73■■□□□ 1.55
LMNB1-202ENST00000395354 VIRMAQ69YN4 1812 aaKnown RBP24.73■■□□□ 1.55
LMNB1-202ENST00000395354 ALDH1L2Q3SY69 923 aa24.73■■□□□ 1.55
LMNB1-202ENST00000395354 SYTL4Q96C24 671 aaPredicted RBP24.73■■□□□ 1.55
LMNB1-202ENST00000395354 TAF7Q15545 349 aaPredicted RBP24.71■■□□□ 1.55
LMNB1-202ENST00000395354 TMOD3Q9NYL9 352 aa24.71■■□□□ 1.55
LMNB1-202ENST00000395354 LAS1LQ9Y4W2 734 aaKnown RBP24.71■■□□□ 1.55
LMNB1-202ENST00000395354 KCNQ2O43526 872 aa24.71■■□□□ 1.55
LMNB1-202ENST00000395354 MS4A1P11836 297 aa24.71■■□□□ 1.55
LMNB1-202ENST00000395354 AAMPQ13685 434 aa24.71■■□□□ 1.55
LMNB1-202ENST00000395354 MBIPQ9NS73 344 aa24.71■■□□□ 1.55
LMNB1-202ENST00000395354 TOGARAM1Q9Y4F4 1720 aa24.7■■□□□ 1.54
LMNB1-202ENST00000395354 BRPF1P55201 1214 aaPredicted RBP24.69■■□□□ 1.54
LMNB1-202ENST00000395354 PIGBQ92521 554 aa24.69■■□□□ 1.54
LMNB1-202ENST00000395354 DOT1LQ8TEK3 1739 aa24.69■■□□□ 1.54
LMNB1-202ENST00000395354 FRAT1Q92837 279 aaPredicted RBP24.68■■□□□ 1.54
LMNB1-202ENST00000395354 SMC4Q9NTJ3 1288 aa24.68■■□□□ 1.54
LMNB1-202ENST00000395354 CHL1O00533 1208 aa24.67■■□□□ 1.54
LMNB1-202ENST00000395354 ZKSCAN2Q63HK3 967 aa24.67■■□□□ 1.54
LMNB1-202ENST00000395354 SSH1Q8WYL5 1049 aa24.67■■□□□ 1.54
LMNB1-202ENST00000395354 MIS18AQ9NYP9 233 aa24.67■■□□□ 1.54
LMNB1-202ENST00000395354 ITGB4P16144 1822 aa24.67■■□□□ 1.54
LMNB1-202ENST00000395354 BTBD11A6QL63 1104 aa24.67■■□□□ 1.54
LMNB1-202ENST00000395354 MRC1P22897 1456 aa24.66■■□□□ 1.54
LMNB1-202ENST00000395354 PTF1AQ7RTS3 328 aa24.66■■□□□ 1.54
LMNB1-202ENST00000395354 KIF16BQ96L93 1317 aa24.65■■□□□ 1.54
LMNB1-202ENST00000395354 VAMP4O75379 141 aa24.65■■□□□ 1.54
LMNB1-202ENST00000395354 TRIM37O94972 964 aa24.65■■□□□ 1.54
LMNB1-202ENST00000395354 BCL2L13Q9BXK5 485 aa24.65■■□□□ 1.54
LMNB1-202ENST00000395354 BCL11BQ9C0K0 894 aaPredicted RBP24.65■■□□□ 1.54
LMNB1-202ENST00000395354 SBF2Q86WG5 1849 aa24.65■■□□□ 1.54
LMNB1-202ENST00000395354 BABAM1Q9NWV8 329 aa24.64■■□□□ 1.54
LMNB1-202ENST00000395354 IPO8O15397 1037 aaKnown RBP24.63■■□□□ 1.53
LMNB1-202ENST00000395354 SIPA1L3O60292 1781 aaPredicted RBP24.63■■□□□ 1.53
LMNB1-202ENST00000395354 SLC39A6Q13433 755 aa24.63■■□□□ 1.53
LMNB1-202ENST00000395354 TSHZ2Q9NRE2 1034 aa24.63■■□□□ 1.53
LMNB1-202ENST00000395354 TSPYL4Q9UJ04 414 aa24.63■■□□□ 1.53
LMNB1-202ENST00000395354 PANK1Q8TE04 598 aa24.62■■□□□ 1.53
LMNB1-202ENST00000395354 NHSQ6T4R5 1651 aa24.61■■□□□ 1.53
LMNB1-202ENST00000395354 TWISTNBQ3B726 338 aaPredicted RBP24.61■■□□□ 1.53
LMNB1-202ENST00000395354 ASAP1Q9ULH1 1129 aa24.61■■□□□ 1.53
LMNB1-202ENST00000395354 ZNF790Q6PG37 636 aa24.6■■□□□ 1.53
LMNB1-202ENST00000395354 DZIP1LQ8IYY4 767 aaKnown RBP24.6■■□□□ 1.53
LMNB1-202ENST00000395354 ATG3Q9NT62 314 aa24.6■■□□□ 1.53
LMNB1-202ENST00000395354 KCNQ3O43525 872 aa24.59■■□□□ 1.53
LMNB1-202ENST00000395354 ATF7IPQ6VMQ6 1270 aa24.59■■□□□ 1.53
LMNB1-202ENST00000395354 TTC5Q8N0Z6 440 aa24.59■■□□□ 1.53
LMNB1-202ENST00000395354 COG6Q9Y2V7 657 aa24.59■■□□□ 1.53
LMNB1-202ENST00000395354 CENPQQ7L2Z9 268 aaPredicted RBP24.58■■□□□ 1.52
LMNB1-202ENST00000395354 TSPYL6Q8N831 410 aa24.58■■□□□ 1.52
LMNB1-202ENST00000395354 C8orf58Q8NAV2 365 aa24.58■■□□□ 1.52
LMNB1-202ENST00000395354 ARHGAP45Q92619 1136 aa24.58■■□□□ 1.52
LMNB1-202ENST00000395354 EP400Q96L91 3159 aa24.57■■□□□ 1.52
LMNB1-202ENST00000395354 NOB1Q9ULX3 412 aaKnown RBP24.57■■□□□ 1.52
LMNB1-202ENST00000395354 KDM2BQ8NHM5 1336 aa24.57■■□□□ 1.52
LMNB1-202ENST00000395354 RLBP1P12271 317 aa24.56■■□□□ 1.52
LMNB1-202ENST00000395354 MVPQ14764 893 aaKnown RBP24.56■■□□□ 1.52
LMNB1-202ENST00000395354 FTSJ3Q8IY81 847 aaKnown RBP24.56■■□□□ 1.52
LMNB1-202ENST00000395354 MRPL50Q8N5N7 158 aaKnown RBP24.56■■□□□ 1.52
LMNB1-202ENST00000395354 SMARCC1Q92922 1105 aaPredicted RBP24.56■■□□□ 1.52
LMNB1-202ENST00000395354 CLUAP1Q96AJ1 413 aa24.56■■□□□ 1.52
LMNB1-202ENST00000395354 TRIM27P14373 513 aa24.55■■□□□ 1.52
LMNB1-202ENST00000395354 BTAF1O14981 1849 aa24.55■■□□□ 1.52
LMNB1-202ENST00000395354 PTCD1O75127 700 aaKnown RBP24.54■■□□□ 1.52
LMNB1-202ENST00000395354 ILDR2Q71H61 639 aa24.54■■□□□ 1.52
LMNB1-202ENST00000395354 APBA3O96018 575 aa24.54■■□□□ 1.52
LMNB1-202ENST00000395354 EIF4A1P60842 406 aaKnown RBP24.54■■□□□ 1.52
LMNB1-202ENST00000395354 ZNF496Q96IT1 587 aaPredicted RBP24.54■■□□□ 1.52
LMNB1-202ENST00000395354 KDM3BQ7LBC6 1761 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms