RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 CEP85Q6P2H3 762 aa19.54■□□□□ 0.72
SMARCD1-202ENST00000394963 AATKQ6ZMQ8 1374 aa19.54■□□□□ 0.72
SMARCD1-202ENST00000394963 PPP1R42Q7Z4L9 355 aa19.54■□□□□ 0.72
SMARCD1-202ENST00000394963 RPAP2Q8IXW5 612 aaPredicted RBP19.54■□□□□ 0.72
SMARCD1-202ENST00000394963 PA2G4Q9UQ80 394 aaKnown RBP19.54■□□□□ 0.72
SMARCD1-202ENST00000394963 PNMA6EA0A0J9YXQ4 647 aa19.54■□□□□ 0.72
SMARCD1-202ENST00000394963 ZNF853P0CG23 659 aa19.54■□□□□ 0.72
SMARCD1-202ENST00000394963 KIAA1211Q6ZU35 1233 aa19.54■□□□□ 0.72
SMARCD1-202ENST00000394963 ZNF335Q9H4Z2 1342 aaPredicted RBP19.53■□□□□ 0.72
SMARCD1-202ENST00000394963 DNAAF4Q8WXU2 420 aa19.53■□□□□ 0.72
SMARCD1-202ENST00000394963 SPG7Q9UQ90 795 aa19.53■□□□□ 0.72
SMARCD1-202ENST00000394963 IFIT2P09913 472 aaKnown RBP19.53■□□□□ 0.72
SMARCD1-202ENST00000394963 ARHGAP45Q92619 1136 aa19.53■□□□□ 0.72
SMARCD1-202ENST00000394963 MAP3K5Q99683 1374 aa19.53■□□□□ 0.72
SMARCD1-202ENST00000394963 DDX58O95786 925 aaKnown RBP19.53■□□□□ 0.72
SMARCD1-202ENST00000394963 SPATA31D1Q6ZQQ2 1576 aa19.53■□□□□ 0.72
SMARCD1-202ENST00000394963 MYD88Q99836 296 aa19.52■□□□□ 0.72
SMARCD1-202ENST00000394963 NBPF7P0C2Y1 421 aaPredicted RBP19.52■□□□□ 0.71
SMARCD1-202ENST00000394963 NEUROD6Q96NK8 337 aa19.52■□□□□ 0.71
SMARCD1-202ENST00000394963 ZBTB3Q9H5J0 574 aa19.52■□□□□ 0.71
SMARCD1-202ENST00000394963 PROSER3Q2NL68 480 aa19.51■□□□□ 0.71
SMARCD1-202ENST00000394963 KLHDC4Q8TBB5 520 aa19.51■□□□□ 0.71
SMARCD1-202ENST00000394963 G3BP1Q13283 466 aaKnown RBP eCLIP19.5■□□□□ 0.71
SMARCD1-202ENST00000394963 TAF7LQ5H9L4 462 aa19.5■□□□□ 0.71
SMARCD1-202ENST00000394963 IGSF1Q8N6C5 1336 aa19.5■□□□□ 0.71
SMARCD1-202ENST00000394963 AMOTQ4VCS5 1084 aa19.5■□□□□ 0.71
SMARCD1-202ENST00000394963 INTS3Q68E01 1043 aaKnown RBP19.5■□□□□ 0.71
SMARCD1-202ENST00000394963 COPS6Q7L5N1 327 aa19.49■□□□□ 0.71
SMARCD1-202ENST00000394963 ANKRD44Q8N8A2 993 aa19.49■□□□□ 0.71
SMARCD1-202ENST00000394963 UPF3BQ9BZI7 483 aaKnown RBP19.49■□□□□ 0.71
SMARCD1-202ENST00000394963 CCDC8Q9H0W5 538 aaPredicted RBP19.49■□□□□ 0.71
SMARCD1-202ENST00000394963 NPHP1O15259 732 aa19.49■□□□□ 0.71
SMARCD1-202ENST00000394963 FGD1P98174 961 aa19.49■□□□□ 0.71
SMARCD1-202ENST00000394963 AKAP4Q5JQC9 854 aa19.49■□□□□ 0.71
SMARCD1-202ENST00000394963 PTPRCP08575 1304 aa19.49■□□□□ 0.71
SMARCD1-202ENST00000394963 KIF13AQ9H1H9 1805 aa19.49■□□□□ 0.71
SMARCD1-202ENST00000394963 RNMTO43148 476 aaKnown RBP19.49■□□□□ 0.71
SMARCD1-202ENST00000394963 MAP2P11137 1827 aaKnown RBP19.49■□□□□ 0.71
SMARCD1-202ENST00000394963 TBC1D32Q96NH3 1257 aa19.48■□□□□ 0.71
SMARCD1-202ENST00000394963 NPHP3Q7Z494 1330 aa19.48■□□□□ 0.71
SMARCD1-202ENST00000394963 NPHP4O75161 1426 aaPredicted RBP19.48■□□□□ 0.71
SMARCD1-202ENST00000394963 DBF4Q9UBU7 674 aaPredicted RBP19.48■□□□□ 0.71
SMARCD1-202ENST00000394963 SDSP20132 328 aa19.48■□□□□ 0.71
SMARCD1-202ENST00000394963 NEK4P51957 841 aa19.48■□□□□ 0.71
SMARCD1-202ENST00000394963 GORABQ5T7V8 394 aa19.47■□□□□ 0.71
SMARCD1-202ENST00000394963 CWC27Q6UX04 472 aaKnown RBP19.47■□□□□ 0.71
SMARCD1-202ENST00000394963 ARHGEF25Q86VW2 580 aa19.47■□□□□ 0.71
SMARCD1-202ENST00000394963 XAGE3Q8WTP9 111 aa19.47■□□□□ 0.71
SMARCD1-202ENST00000394963 CLASRPQ8N2M8 674 aaKnown RBP19.47■□□□□ 0.71
SMARCD1-202ENST00000394963 PLEKHM2Q8IWE5 1019 aa19.46■□□□□ 0.71
SMARCD1-202ENST00000394963 IFT172Q9UG01 1749 aa19.46■□□□□ 0.71
SMARCD1-202ENST00000394963 DIAPH3Q9NSV4 1193 aa19.46■□□□□ 0.71
SMARCD1-202ENST00000394963 CDK12Q9NYV4 1490 aaPredicted RBP19.46■□□□□ 0.71
SMARCD1-202ENST00000394963 MCCP23508 829 aa19.46■□□□□ 0.71
SMARCD1-202ENST00000394963 IFNL2Q8IZJ0 200 aa19.45■□□□□ 0.7
SMARCD1-202ENST00000394963 PIK3R4Q99570 1358 aa19.45■□□□□ 0.7
SMARCD1-202ENST00000394963 MX1P20591 662 aa19.45■□□□□ 0.7
SMARCD1-202ENST00000394963 UBE3BQ7Z3V4 1068 aa19.45■□□□□ 0.7
SMARCD1-202ENST00000394963 AACSQ86V21 672 aa19.45■□□□□ 0.7
SMARCD1-202ENST00000394963 DCTPP1Q9H773 170 aa19.45■□□□□ 0.7
SMARCD1-202ENST00000394963 EIF4A1P60842 406 aaKnown RBP19.44■□□□□ 0.7
SMARCD1-202ENST00000394963 ZNF496Q96IT1 587 aaPredicted RBP19.44■□□□□ 0.7
SMARCD1-202ENST00000394963 DNAJC2Q99543 621 aaKnown RBP19.44■□□□□ 0.7
SMARCD1-202ENST00000394963 SLAIN2Q9P270 581 aa19.44■□□□□ 0.7
SMARCD1-202ENST00000394963 ABCC4O15439 1325 aa19.44■□□□□ 0.7
SMARCD1-202ENST00000394963 USP16Q9Y5T5 823 aa19.44■□□□□ 0.7
SMARCD1-202ENST00000394963 IQSEC2Q5JU85 1478 aa19.43■□□□□ 0.7
SMARCD1-202ENST00000394963 REC8O95072 547 aa19.43■□□□□ 0.7
SMARCD1-202ENST00000394963 BMP2KLQ5H9B9 411 aa19.43■□□□□ 0.7
SMARCD1-202ENST00000394963 GPTP24298 496 aa19.43■□□□□ 0.7
SMARCD1-202ENST00000394963 BOLA2Q9H3K6 86 aa19.42■□□□□ 0.7
SMARCD1-202ENST00000394963 CHMP4AQ9BY43 222 aa19.41■□□□□ 0.7
SMARCD1-202ENST00000394963 GOLGA6L22H0YM25 854 aa19.41■□□□□ 0.7
SMARCD1-202ENST00000394963 ST18O60284 1047 aa19.41■□□□□ 0.7
SMARCD1-202ENST00000394963 ARHGEF10O15013 1369 aa19.41■□□□□ 0.7
SMARCD1-202ENST00000394963 GSE1Q14687 1217 aa19.41■□□□□ 0.7
SMARCD1-202ENST00000394963 TTC22Q5TAA0 569 aa19.41■□□□□ 0.7
SMARCD1-202ENST00000394963 ACSBG1Q96GR2 724 aa19.41■□□□□ 0.7
SMARCD1-202ENST00000394963 USP44Q9H0E7 712 aa19.41■□□□□ 0.7
SMARCD1-202ENST00000394963 NEURL4Q96JN8 1562 aa19.4■□□□□ 0.7
SMARCD1-202ENST00000394963 NDUFB9Q9Y6M9 179 aa19.4■□□□□ 0.7
SMARCD1-202ENST00000394963 KIAA0232Q92628 1395 aa19.4■□□□□ 0.7
SMARCD1-202ENST00000394963 A0A087WZG4 1122 aa19.4■□□□□ 0.7
SMARCD1-202ENST00000394963 PDE1AP54750 535 aa19.4■□□□□ 0.7
SMARCD1-202ENST00000394963 ZNF790Q6PG37 636 aa19.4■□□□□ 0.7
SMARCD1-202ENST00000394963 GSPT1P15170 499 aaKnown RBP19.4■□□□□ 0.7
SMARCD1-202ENST00000394963 BTG4Q9NY30 223 aa19.39■□□□□ 0.7
SMARCD1-202ENST00000394963 A1BGP04217 495 aa19.39■□□□□ 0.69
SMARCD1-202ENST00000394963 GPATCH3Q96I76 525 aa19.39■□□□□ 0.69
SMARCD1-202ENST00000394963 RIMS1Q86UR5 1692 aaKnown RBP19.39■□□□□ 0.69
SMARCD1-202ENST00000394963 ZCRB1Q8TBF4 217 aaKnown RBP19.38■□□□□ 0.69
SMARCD1-202ENST00000394963 CHMP5Q9NZZ3 219 aa19.38■□□□□ 0.69
SMARCD1-202ENST00000394963 OVOS2A0A0J9YW53 1432 aa19.38■□□□□ 0.69
SMARCD1-202ENST00000394963 OVOS2Q6IE36 1432 aa19.38■□□□□ 0.69
SMARCD1-202ENST00000394963 COL3A1P02461 1466 aaPredicted RBP19.38■□□□□ 0.69
SMARCD1-202ENST00000394963 LARP1Q6PKG0 1096 aaKnown RBP19.37■□□□□ 0.69
SMARCD1-202ENST00000394963 FSD1Q9BTV5 496 aa19.37■□□□□ 0.69
SMARCD1-202ENST00000394963 RTL1A6NKG5 1358 aa19.37■□□□□ 0.69
SMARCD1-202ENST00000394963 ERC2O15083 957 aa19.37■□□□□ 0.69
SMARCD1-202ENST00000394963 ANKRD13DQ6ZTN6 518 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms